BAC Information

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BAC

Clone NameB6Ng01-162B06
Chromosome14 (Build37)
Map Location 81,179,453 - 81,180,680
singlet/doubletsinglet
Overlap genenone
Upstream geneEG629734, Olfm4, LOC672828
Downstream geneLOC639207
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162B06.bB6Ng01-162B06.g
ACCDH955008DH955009
length1,2031,137
definitionDH955008|Mus musculus domesticus DNA, BAC clone: B6Ng01-162B06, 5' end.DH955009|Mus musculus domesticus DNA, BAC clone: B6Ng01-162B06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactacttgtcactaagtgacatcagttgacactgctaatttcaa
acgaagccaagaatatgctcgttctaggtcacaagagccatctgctaagc
ttattttcagatagtgagcccatgtctccttcatagtaacctctccaact
gaagatatagaagacccttgaccttgagatcttggctcatttgtttcttt
gccctattcctccagtttctttctagctgttcatccctggctcctataag
gagacctggggtgtaggctaaagccaggggatgaacaggaaaataaagat
aggattgtgtgtgaagatatactttagctagagttccagccaattctcac
cagctttgagttaatggtcatttttttttaatcagatgacccggaaagta
tagagtagaggtgttatttcccatccatataggaagcattaaaaaaaatt
ccccaatgagcactcattgtccttatttttgctgttttctagtatacaaa
tgacattaagttctttaatttttaagcactaggtaaaattatctaattat
ttacccaaatgtttcaaatattcatttctaattttaaaagtaagcatggt
gattattttattccttttattttctatcatcgttcattcatacaaaaaag
acaaatggcagaaagcacatacatttagacttctcttgtttcagaagaca
attcttctttatgatatttttattgatacaagtctcttatcagaccataa
gaaactcctggccaactggcattctggtaagcatttcactatggtcactt
tgtccagctggcctttcttttctggaacctagaggtaagctggttggtca
ttgtttctttagcttttggggcatttgcatatattcattgggactttaaa
taattatctagagcattgtttaccttacctgaatttctggagatccattt
tatttgcatacttttctagtgggtcatagcgtgtctttttgtttggttaa
ctacattcagcccttagtagagagctgttggttgtttagtctattaaaac
tgccatgtttacttgtcacctccggctctgggtttattctagagttcttc
ggctcatgcagtacttcagtttaaatttcctcacatcctggaaacaaatc
taactccatttctttagggaagaccaatgtcagagccatcctcttcattt
aac
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccatttgcatacactagcaagattttattgaa
aggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcataggctccca
tggagagctagaaaagtagccaaggagctaaagggacttgcaccctatat
ggtggaacaacttatgagttaccataccccggagctctgactctagcttg
catataattaaaagatggctctagtcgcttcactggaaaagagagggccc
ttgggacttgctcaatcttttattagtccttcagtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_81179453_81180680
seq2: B6Ng01-162B06.b_46_1248

seq1  GAATTCACTACTTGTCACTAAGTGACATCAGTTGACACTGCTAATTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACTTGTCACTAAGTGACATCAGTTGACACTGCTAATTTCAA  50

seq1  ACGAAGCCAAGAATATGCTCGTTCTAGGTCACAAGAGCCATCTGCTAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAGCCAAGAATATGCTCGTTCTAGGTCACAAGAGCCATCTGCTAAGC  100

seq1  TTATTTTCAGATAGTGAGCCCATGTCTCCTTCATAGTAACCTCTCCAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCAGATAGTGAGCCCATGTCTCCTTCATAGTAACCTCTCCAACT  150

seq1  GAAGATATAGAAGACCCTTGACCTTGAGATCTTGGCTCATTTGTTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATATAGAAGACCCTTGACCTTGAGATCTTGGCTCATTTGTTTCTTT  200

seq1  GCCCTATTCCTCCAGTTTCTTTCTAGCTGTTCATCCCTGGCTCCTATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTATTCCTCCAGTTTCTTTCTAGCTGTTCATCCCTGGCTCCTATAAG  250

seq1  GAGACCTGGGGTGTAGGCTAAAGCCAGGGGATGAACAGGAAAATAAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTGGGGTGTAGGCTAAAGCCAGGGGATGAACAGGAAAATAAAGAT  300

seq1  AGGATTGTGTGTGAAGATATACTTTAGCTAGAGTTCCAGCCAATTCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGTGTGTGAAGATATACTTTAGCTAGAGTTCCAGCCAATTCTCAC  350

seq1  CAGCTTTGAGTTAATGGTCATTTTTTTTTAATCAGATGACCCGGAAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTGAGTTAATGGTCATTTTTTTTTAATCAGATGACCCGGAAAGTA  400

seq1  TAGAGTAGAGGTGTTATTTCCCATCCATATAGGAAGCATTAAAAAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTAGAGGTGTTATTTCCCATCCATATAGGAAGCATTAAAAAAAATT  450

seq1  CCCCAATGAGCACTCATTGTCCTTATTTTTGCTGTTTTCTAGTATACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAATGAGCACTCATTGTCCTTATTTTTGCTGTTTTCTAGTATACAAA  500

seq1  TGACATTAAGTTCTTTAATTTTTAAGCACTAGGTAAAATTATCTAATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTAAGTTCTTTAATTTTTAAGCACTAGGTAAAATTATCTAATTAT  550

seq1  TTACCCAAATGTTTCAAATATTCATTTCTAATTTTAAAAGTAAGCATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCAAATGTTTCAAATATTCATTTCTAATTTTAAAAGTAAGCATGGT  600

seq1  GATTATTTTATTCCTTTTATTTTCTATCATCGTTCATTCATACAAAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTTTATTCCTTTTATTTTCTATCATCGTTCATTCATACAAAAAAG  650

seq1  ACAAATGGCAGAAAGCACATACATTTAGACTTCTCTTGTTTCAGAAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGCAGAAAGCACATACATTTAGACTTCTCTTGTTTCAGAAGACA  700

seq1  ATTCTTCTTTATGATATTTTTATTGATACAAGTCTCTTATCAGACCATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTTTATGATATTTTTATTGATACAAGTCTCTTATCAGACCATAA  750

seq1  GAAACTCCTGGCCAACTGGCATTCTGGTAAGCATTTCACTATGGTCACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCCTGGCCAACTGGCATTCTGGTAAGCATTTCACTATGGTCACTT  800

seq1  TGTCCAGCTGGCCTTTCTTTTCTGGAACCTAGAGGTAAGCTGGTTGGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGCTGGCCTTTCTTTTCTGGAACCTAGAGGTAAGCTGGTTGGTCA  850

seq1  TTGTTTGCTTTAGCTTTTGGGGCATTTGCATATATTCATTGGGACTTTAA  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTT-CTTTAGCTTTTGGGGCATTTGCATATATTCATTGGGACTTTAA  899

seq1  ATAATTATCTAGAGCATTGTTTACCTTACCTGAATTTCTGGAGATCCATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATCTAGAGCATTGTTTACCTTACCTGAATTTCTGGAGATCCATT  949

seq1  TTATTTGCATACTTTTCTAAGTGGGTCATAGCGTGTCTTTTTGTTTGGTT  1000
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTATTTGCATACTTTTCT-AGTGGGTCATAGCGTGTCTTTTTGTTTGGTT  998

seq1  AACTACATTCAGGCCCTTTAAGTAGGAGAGCTGTTGGTTGTTTAGTCTAT  1050
      ||||||||||| ||||||  |||| |||||||||||||||||||||||||
seq2  AACTACATTCA-GCCCTT--AGTA-GAGAGCTGTTGGTTGTTTAGTCTAT  1044

seq1  TAAAACTGCCATTTGTTTACTTGTCACTTCGGGCTCCTGTGTTTATTCAA  1100
      |||||||||||  |||||||||||||| || |||| ||| |||||||| |
seq2  TAAAACTGCCA--TGTTTACTTGTCACCTCCGGCT-CTGGGTTTATTCTA  1091

seq1  GGAGGTTCTTCGTGCTCATGCAGTACTTCAGGTTTAAATTTCCTCACATC  1150
      |   |||||||| ||||||||||||||||| |||||||||||||||||||
seq2  G--AGTTCTTCG-GCTCATGCAGTACTTCA-GTTTAAATTTCCTCACATC  1137

seq1  TTTAAAACAAATCATATCTCCATTTCTTTAGGGAAAGACCCCCATATTGC  1200
       |  ||||||||| || |||||||||||||||| ||||||     | || 
seq2  CTGGAAACAAATC-TAACTCCATTTCTTTAGGG-AAGACC-----AATG-  1179

seq1  TCAGAGAGCCATCCTCTTCTCATTTAAC  1228
      ||  |||||||||||||  |||||||||
seq2  TC--AGAGCCATCCTCT--TCATTTAAC  1203