BAC Information

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BAC

Clone NameB6Ng01-163K11
Chromosome14 (Build37)
Map Location 15,229,673 - 15,230,679
singlet/doubletsinglet
Overlap genenone
Upstream geneSynpr, A430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139
Downstream geneOlfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10, Lrrc3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163K11.bB6Ng01-163K11.g
ACCDH956186DH956187
length1,0071,114
definitionDH956186|Mus musculus domesticus DNA, BAC clone: B6Ng01-163K11, 5' end.DH956187|Mus musculus domesticus DNA, BAC clone: B6Ng01-163K11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatttgaaaaataatcctgttgtatatcataatagaactgaag
aaaatttttttatacatttcttctttttactctgaaagaaagatgcgcat
gccagtgtgtctgtgacaagaggaaaccactaggttaatcagacccagga
gaagaagatttcacagaaccacttggctagctactcagaaaccatgtaat
ttgcctttatctgttgacaaatgatttttaaagtctcagagtaaatgctg
aagggactagaacttcgggtgggtttattgaatcacatgcatggttctat
cacattttgtttgtccttgcatgtattctagatatttttaggtgtagatg
ttcttagatgttttctcacctgttgaataaaatgcattagtacaatccaa
tcacctatgagcacattagagcccattatcggtggatattaagtttaaat
aatttgactttgttttctgtttcaatagtcacctctagtgtgcacttagt
agttttataaacaattgaataagaatataatcttttctttattcttctga
gacggtgctgtgagataccagtgaggatagctgacacagaagacaaagat
gacatctagtcacaagttgggaatctggtccctgctgttatgtgatacta
caggaacaaacatatactcactcatgacaggaaatcaacaacagaccaaa
gtaaagacaccaccaaagtcaaactcagtgaaccaatgtcttttattaag
gttacttacaatactatggggaagaggttacttacaggagcagaaatgac
tcagatggtttcatcctcaaatgtccactcatgaaaactagaaccctggg
atttgctgcataacttacaggcatttcttcggatctagagtgcctctttt
ctacgcatctcagttagtctgagatacttccagaaaggtcagctggtctc
tgtctccttaagcaacttagctgatttgcctcttctaggcatgggggggg
ggggggg
gaattcctggcctttccatgacttttatcaggaaggggtgttggatgttg
tcaaatgctttctcagcatctaatgagaagatcacgtgatttttgtcttt
gagtttgtttatatactggattatgtggatggatttccatatattaaacc
atccctgcatccctgggatgaagcctacttagtcatgatgggtgatcgtt
ttgatgtgttcttggattcagtttgcaaggattttattgagtatttttgc
atcgatattcataagggaaattgttctgaagttcactttgttggatcttt
gtgtggtttaggtatcagagtaattgtgtcttcataaaataaattggata
gagtacctgttgtttctaatttgtagaatagtttgaggagacttggaatt
aggtcttctttgaaggtctgaactaaacccatctggtccttgactttttg
tggtagggtgactattaatgactgattttatttctttaggggatatggga
ctgattatattattaatctgatcctgatttgactttgttacctggtatct
gtctagaaaattgtccatttcatacagggtttccagttttgttgagtata
gccttttgtattatgatctgatgatgttttggatttccttaggatctgtt
gttatgtctcccttttcatttctgaattttgctaattaggatactgtccc
tttgccctccagttagtctgactacgggttttatctatctttgttgattt
ttctcaaaaaacagctcctgatttggttgactcttttatataattttttt
tgtttccacatggttgattttttccctgattttgattattttctgcaatc
tactcctcttgggtgtatttgcttccttttgttctagagcttttagatgt
gctgtcaagctgctaatgtattctctctctagtttcttttgggagcactc
aaagctatgagttttctgcttataagtactttcatttgtgtcccgaagtt
gggtaatgttgtggctttgtgtcttataaccctaaaaaatcttctatttc
ttctcttatcctccctcgcacaatttatcatgattagcggttgttccact
tcctagtgaggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_15229673_15230679
seq2: B6Ng01-163K11.b_40_1045 (reverse)

seq1  CCCCCCCCCCCCCCATGCCTAGAAGAGGCAAATCAGCTAAGTTGCTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCCATGCCTAGAAGAGGCAAATCAGCTAAGTTGCTTAAG  50

seq1  GAGACAGAGACCAGCTGACCTTTCTGGAAGTATCTCAGACTAACTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGACCAGCTGACCTTTCTGGAAGTATCTCAGACTAACTGAGAT  100

seq1  GCGTAGAAAAGAGGCACTCTAGATCCGAAGAAATGCCTGTAAGTTATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTAGAAAAGAGGCACTCTAGATCCGAAGAAATGCCTGTAAGTTATGCA  150

seq1  GCAAATCCCAGGGTTCTAGTTTTCATGAGTGGACATTTGAGGATGAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCCCAGGGTTCTAGTTTTCATGAGTGGACATTTGAGGATGAAACC  200

seq1  ATCTTGAGTCATTTCTGCTCCTGTAAGTAACCTCTTCCCCATAGTATTGT  250
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATC-TGAGTCATTTCTGCTCCTGTAAGTAACCTCTTCCCCATAGTATTGT  249

seq1  AAGTAACCTTAATAAAAGACATTGGTTCACTGAGTTTGACTTTGGTGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACCTTAATAAAAGACATTGGTTCACTGAGTTTGACTTTGGTGGTG  299

seq1  TCTTTACTTTGGTCTGTTGTTGATTTCCTGTCATGAGTGAGTATATGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTTTGGTCTGTTGTTGATTTCCTGTCATGAGTGAGTATATGTTT  349

seq1  GTTCCTGTAGTATCACATAACAGCAGGGACCAGATTCCCAACTTGTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGTAGTATCACATAACAGCAGGGACCAGATTCCCAACTTGTGACT  399

seq1  AGATGTCATCTTTGTCTTCTGTGTCAGCTATCCTCACTGGTATCTCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCATCTTTGTCTTCTGTGTCAGCTATCCTCACTGGTATCTCACAG  449

seq1  CACCGTCTCAGAAGAATAAAGAAAAGATTATATTCTTATTCAATTGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGTCTCAGAAGAATAAAGAAAAGATTATATTCTTATTCAATTGTTTA  499

seq1  TAAAACTACTAAGTGCACACTAGAGGTGACTATTGAAACAGAAAACAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTACTAAGTGCACACTAGAGGTGACTATTGAAACAGAAAACAAAG  549

seq1  TCAAATTATTTAAACTTAATATCCACCGATAATGGGCTCTAATGTGCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTATTTAAACTTAATATCCACCGATAATGGGCTCTAATGTGCTCA  599

seq1  TAGGTGATTGGATTGTACTAATGCATTTTATTCAACAGGTGAGAAAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGATTGGATTGTACTAATGCATTTTATTCAACAGGTGAGAAAACAT  649

seq1  CTAAGAACATCTACACCTAAAAATATCTAGAATACATGCAAGGACAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAACATCTACACCTAAAAATATCTAGAATACATGCAAGGACAAACA  699

seq1  AAATGTGATAGAACCATGCATGTGATTCAATAAACCCACCCGAAGTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGATAGAACCATGCATGTGATTCAATAAACCCACCCGAAGTTCTA  749

seq1  GTCCCTTCAGCATTTACTCTGAGACTTTAAAAATCATTTGTCAACAGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTCAGCATTTACTCTGAGACTTTAAAAATCATTTGTCAACAGATA  799

seq1  AAGGCAAATTACATGGTTTCTGAGTAGCTAGCCAAGTGGTTCTGTGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAATTACATGGTTTCTGAGTAGCTAGCCAAGTGGTTCTGTGAAAT  849

seq1  CTTCTTCTCCTGGGTCTGATTAACCTAGTGGTTTCCTCTTGTCACAGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTCCTGGGTCTGATTAACCTAGTGGTTTCCTCTTGTCACAGACA  899

seq1  CACTGGCATGCGCATCTTTCTTTCAGAGTAAAAAGAAGAAATGTATAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCATGCGCATCTTTCTTTCAGAGTAAAAAGAAGAAATGTATAAAA  949

seq1  AAATTTTCTTCAGTTCTATTATGATATACAACAGGATTATTTTTCAAATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCTTCAGTTCTATTATGATATACAACAGGATTATTTTTCAAATG  999

seq1  TGAATTC  1007
      |||||||
seq2  TGAATTC  1006