BAC Information

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BAC

Clone NameB6Ng01-164C19
Chromosome14 (Build37)
Map Location 76,068,877 - 76,206,525
singlet/doubletdoublet
Overlap geneCog3, Slc25a30
Upstream geneHtr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik, 4921509B22Rik, LOC100043176, Lcp1, Cpb2, Zc3h13, Gm912, Spert, 4930564B18Rik
Downstream geneLOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik, Tsc22d1, 2810032E02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164C19.bB6Ng01-164C19.g
ACCDH956569DH956570
length1,0911,093
definitionDH956569|Mus musculus domesticus DNA, BAC clone: B6Ng01-164C19, 5' end.DH956570|Mus musculus domesticus DNA, BAC clone: B6Ng01-164C19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,205,425 - 76,206,525)(76,068,877 - 76,069,983)
sequence
gaattcaagagaagcccagacattaaactcatagcccttctttggtctgt
gatgtcttggttattccttcccagcagagagtgcgcccatcttgctggct
cacatcctccttgcttggtacttcctcgctcattgctccactcattgtcc
ctagggtctttcatccagagctgcggactcagccactgctggtatgatgt
catcgagtctacagtcacttctagctagtcccagcttctgaaacgctagc
cccgtatatatcacaccgactacgggacagtttcccttaagtcttagata
ccttgaaccagtgtgttcagaatcctcatctttatatataaactgctcct
tcccctaaaatctgctgggtggagggtgggcagatggctcagtgagtcaa
gtgctagctgttgaaatgtgaggaccctggttcatccctcagtgtccgtg
taaaggtcaggtgtggcattgtgcgcctgtaatcccagcactgaggtggt
ggagacaggaggccccctggggctctctggccagtctgtctgcctggatc
ttctgttccaggttcagggagaaaccccacctccaaaactaaggtgggga
gcagtttggaaagactctcgaaactgacttttggccttcatgtatgtgta
ctcatgcacacatatgcactcttatgcacataaaaacatctttgctgtgt
cataccactagtcaacttttgacccaagccagaaacccaggagtttacct
ccagggcttctccaccaccactgccaccacagcagaggggtcacattctc
tataatcaactttcccgtaatcctgttctttgtttgttttgttttgtttt
gtttttcaaggcagggtttctctgggtagccatgtctcttctacttgctc
tgtagaccagctggcccagaactcagaaagccacctgcctctgccctgct
aggacgaaagtgtgtacaggaaacttaccagagcctgttagtcatatatt
ctggacgatttttttcccttctttgaaagatatatatcttcaagaaacaa
aggaattcctccctttcattaactgacatgcctcctgttgg
gaattcccaaacataaatggagaaaaactattctgaactttaagaatgtg
gtcaggaaaactgaatcccagggtaaatattccaaaaacaacagtaacaa
tagaaataaaattaaaaaaaaaaaaccctgtggcttttttatttatagac
cttttgtctatatgtgaaccatgtatgcaatacccatagaagccagaaga
tggcactggatcccctacaacagcagttttaggcagttgtgagccacctg
atatgggtgctgcaaatcaaatcaaggtctgctgcaagagcagcacttac
tgtgaaccactgagctgtgtctccagccccctccccccagccctgttaca
atgtaactagagaacaggggccctgttacaatgtaactagagaacagggg
ccctgttacaatgtaactagagaacaggggccctgttacaatgtaactag
agcacaatggttatgacagcctcgcttgcactgccagtgctggcagatgg
cacagagttgtgttctacaagcaccatttcattttttacttcactggcaa
agaaaatcatcttcagaatagaaaaagcacagtaaactgaataagaagca
gcggaaaccaaggttgttgaaaaagtcagaagagaataacaactgttgcc
ttctgacctagacaaaacagcctccaaatatagagactgcctcaaccatc
tttctgggatctgaggaattatgatgaatcagggagatgagcttgcgcca
atctagggcagatgttgagagtaaaatgccctcaacaaaccaatatacag
ctagcagggacagtcatttaatgttggttggcatttcttggcaaacagcc
ataaggaaatataatagccctgcagctccaaatccctccaggcctttaca
cccaatggcttctcagtgtttgggacagacagagcaataagagctgaaag
ctgaagcagatgatgaagcataacagactgggccacccctggctgtgggt
tctgggtcctattagaaagcaggctgagcaagcaccagagcaagccatag
cagcaccctccaaggctctgcatcagctcctgcctccaggccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_76205425_76206525
seq2: B6Ng01-164C19.b_47_1137 (reverse)

seq1  CCAACAGGAGGGCATGTCAGTTAATGAAAGGGAGGAATTGCCTTTGTCTC  50
      ||||||||| ||||||||||||||||||||||||||||| ||||||| ||
seq2  CCAACAGGA-GGCATGTCAGTTAATGAAAGGGAGGAATT-CCTTTGTTTC  48

seq1  -TGGAGATATATAACCTTTCAGAAGAGGGGAAAAAAATCGTCCAAGAATA  99
       || |||||||| | |||||| |||| |||||||||||||||| ||||||
seq2  TTGAAGATATAT-ATCTTTCA-AAGAAGGGAAAAAAATCGTCC-AGAATA  95

seq1  TAATGACCTAAACAGGCTCTGGTAAGTTTCCTGTACACACCTTTCGTCCT  149
      | |||||   ||||||||||||||||||||||||||||| ||||||||||
seq2  T-ATGAC--TAACAGGCTCTGGTAAGTTTCCTGTACACA-CTTTCGTCCT  141

seq1  AGCAGGGGCAGAGGCAGGTGGCTTTCTGAGTTCTGGGCCAGCCTGGTCTA  199
      |||| |||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGCA-GGGCAGAGGCAGGTGGCTTTCTGAGTTCTGGGCCAG-CTGGTCTA  189

seq1  CAGAGCAAGTAGAAGAGACATGGCTACCCAGAGAAACCCTGCCTTGAAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAAGTAGAAGAGACATGGCTACCCAGAGAAACCCTGCCTTGAAAA  239

seq1  ACAAAACAAAACAAAACAAACAAAGAACAGGATTACGGGAAAGTTGATTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAACAAACAAAGAACAGGATTACGGGAAAGTTGATTA  289

seq1  TAGAGAATGTGACCCCTCTGCTGTGGTGGCAGTGGTGGTGGAGAAGCCCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAATGTGACCCCTCTGCTGTGGTGGCAGTGGTGGTGGAGAAGCCCT  339

seq1  GGAGGTAAACTCCTGGGTTTCTGGCTTGGGTCAAAAGTTGACTAGTGGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAAACTCCTGGGTTTCTGGCTTGGGTCAAAAGTTGACTAGTGGTA  389

seq1  TGACACAGCAAAGATGTTTTTATGTGCATAAGAGTGCATATGTGTGCATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAGCAAAGATGTTTTTATGTGCATAAGAGTGCATATGTGTGCATG  439

seq1  AGTACACATACATGAAGGCCAAAAGTCAGTTTCGAGAGTCTTTCCAAACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACATACATGAAGGCCAAAAGTCAGTTTCGAGAGTCTTTCCAAACT  489

seq1  GCTCCCCACCTTAGTTTTGGAGGTGGGGTTTCTCCCTGAACCTGGAACAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCACCTTAGTTTTGGAGGTGGGGTTTCTCCCTGAACCTGGAACAG  539

seq1  AAGATCCAGGCAGACAGACTGGCCAGAGAGCCCCAGGGGGCCTCCTGTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCAGGCAGACAGACTGGCCAGAGAGCCCCAGGGGGCCTCCTGTCT  589

seq1  CCACCACCTCAGTGCTGGGATTACAGGCGCACAATGCCACACCTGACCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCTCAGTGCTGGGATTACAGGCGCACAATGCCACACCTGACCTT  639

seq1  TACACGGACACTGAGGGATGAACCAGGGTCCTCACATTTCAACAGCTAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGGACACTGAGGGATGAACCAGGGTCCTCACATTTCAACAGCTAGC  689

seq1  ACTTGACTCACTGAGCCATCTGCCCACCCTCCACCCAGCAGATTTTAGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACTCACTGAGCCATCTGCCCACCCTCCACCCAGCAGATTTTAGGG  739

seq1  GAAGGAGCAGTTTATATATAAAGATGAGGATTCTGAACACACTGGTTCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGCAGTTTATATATAAAGATGAGGATTCTGAACACACTGGTTCAA  789

seq1  GGTATCTAAGACTTAAGGGAAACTGTCCCGTAGTCGGTGTGATATATACG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCTAAGACTTAAGGGAAACTGTCCCGTAGTCGGTGTGATATATACG  839

seq1  GGGCTAGCGTTTCAGAAGCTGGGACTAGCTAGAAGTGACTGTAGACTCGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAGCGTTTCAGAAGCTGGGACTAGCTAGAAGTGACTGTAGACTCGA  889

seq1  TGACATCATACCAGCAGTGGCTGAGTCCGCAGCTCTGGATGAAAGACCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCATACCAGCAGTGGCTGAGTCCGCAGCTCTGGATGAAAGACCCT  939

seq1  AGGGACAATGAGTGGAGCAATGAGCGAGGAAGTACCAAGCAAGGAGGATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAATGAGTGGAGCAATGAGCGAGGAAGTACCAAGCAAGGAGGATG  989

seq1  TGAGCCAGCAAGATGGGCGCACTCTCTGCTGGGAAGGAATAACCAAGACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAGCAAGATGGGCGCACTCTCTGCTGGGAAGGAATAACCAAGACA  1039

seq1  TCACAGACCAAAGAAGGGCTATGAGTTTAATGTCTGGGCTTCTCTTGAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGACCAAAGAAGGGCTATGAGTTTAATGTCTGGGCTTCTCTTGAAT  1089

seq1  TC  1101
      ||
seq2  TC  1091

seq1: chr14_76068877_76069983
seq2: B6Ng01-164C19.g_68_1160

seq1  GAATTCCCAAACATAAATGGAGAAAAACTATTCTGAACTTTAAGAATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAACATAAATGGAGAAAAACTATTCTGAACTTTAAGAATGTG  50

seq1  GTCAGGAAAACTGAATCCCAGGGTAAATATTCCAAAAACAACAGTAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAAAACTGAATCCCAGGGTAAATATTCCAAAAACAACAGTAACAA  100

seq1  TAGAAATAAAATTAAAAAAAAAAAACCCTGTGGCTTTTTTATTTATAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATAAAATTAAAAAAAAAAAACCCTGTGGCTTTTTTATTTATAGAC  150

seq1  CTTTTGTCTATATGTGAACCATGTATGCAATACCCATAGAAGCCAGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTCTATATGTGAACCATGTATGCAATACCCATAGAAGCCAGAAGA  200

seq1  TGGCACTGGATCCCCTACAACAGCAGTTTTAGGCAGTTGTGAGCCACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTGGATCCCCTACAACAGCAGTTTTAGGCAGTTGTGAGCCACCTG  250

seq1  ATATGGGTGCTGCAAATCAAATCAAGGTCTGCTGCAAGAGCAGCACTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGTGCTGCAAATCAAATCAAGGTCTGCTGCAAGAGCAGCACTTAC  300

seq1  TGTGAACCACTGAGCTGTGTCTCCAGCCCCCTCCCCCCAGCCCTGTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACCACTGAGCTGTGTCTCCAGCCCCCTCCCCCCAGCCCTGTTACA  350

seq1  ATGTAACTAGAGAACAGGGGCCCTGTTACAATGTAACTAGAGAACAGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACTAGAGAACAGGGGCCCTGTTACAATGTAACTAGAGAACAGGGG  400

seq1  CCCTGTTACAATGTAACTAGAGAACAGGGGCCCTGTTACAATGTAACTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTACAATGTAACTAGAGAACAGGGGCCCTGTTACAATGTAACTAG  450

seq1  AGCACAATGGTTATGACAGCCTCGCTTGCACTGCCAGTGCTGGCAGATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAATGGTTATGACAGCCTCGCTTGCACTGCCAGTGCTGGCAGATGG  500

seq1  CACAGAGTTGTGTTCTACAAGCACCATTTCATTTTTTACTTCACTGGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGTTGTGTTCTACAAGCACCATTTCATTTTTTACTTCACTGGCAA  550

seq1  AGAAAATCATCTTCAGAATAGAAAAAGCACAGTAAACTGAATAAGAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCATCTTCAGAATAGAAAAAGCACAGTAAACTGAATAAGAAGCA  600

seq1  GCGGAAACCAAGGTTGTTGAAAAAGTCAGAAGAGAATAACAACTGTTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAAACCAAGGTTGTTGAAAAAGTCAGAAGAGAATAACAACTGTTGCC  650

seq1  TTCTGACCTAGACAAAACAGCCTCCAAATATAGAGACTGCCTCAACCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACCTAGACAAAACAGCCTCCAAATATAGAGACTGCCTCAACCATC  700

seq1  TTTCTGGGATCTGAGGAATTATGATGAATCAGGGAGATGAGCTTGCGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGATCTGAGGAATTATGATGAATCAGGGAGATGAGCTTGCGCCA  750

seq1  ATCTAGGGCAGATGTTGAGAGTAAAATGCCCTCAACAAACCAATATACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGGCAGATGTTGAGAGTAAAATGCCCTCAACAAACCAATATACAG  800

seq1  CTAGCAGGGACAGTCATTTAATGTTGGTTGGCATTTCTTGGCAAAACAGC  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTAGCAGGGACAGTCATTTAATGTTGGTTGGCATTTCTTGGC-AAACAGC  849

seq1  CATAAGGAAATATAATAGCCCTGCAGCTCCAAATCCCTCCAGGCCTTTAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CATAAGGAAATATAATAGCCCTGCAGCTCCAAATCCCTCCAGGCCTTT-A  898

seq1  CACCCAATGGCTTCTCAGTGTTTTGGGACAAGACAGAGCAATAAGAGCTG  950
      |||||||||||||||||||| |||||||| ||||||||||||||||||||
seq2  CACCCAATGGCTTCTCAGTG-TTTGGGAC-AGACAGAGCAATAAGAGCTG  946

seq1  AAAGCTGAAGCAAGATGATGAAGCAATAACAGAACTGGGCCACCCCTGGG  1000
      ||||||||||| |||||||||||| ||||||| |||||||||||||| ||
seq2  AAAGCTGAAGC-AGATGATGAAGC-ATAACAG-ACTGGGCCACCCCT-GG  992

seq1  CTGGTGGTTCTGGGTCCTATTAGAAAGCAGGCTGAGCAAGCCACAGGGAG  1050
      |||  ||||||||||||||||||||||||||||||||||||  ||  |||
seq2  CTGTGGGTTCTGGGTCCTATTAGAAAGCAGGCTGAGCAAGCACCA--GAG  1040

seq1  CAAGCCAATAAGCAGCACCCCTCCAAGGCCTCTGCATCAGCTCCTGCCTC  1100
      |||||||   ||||||| |||||||||| |||||||||||||||||||||
seq2  CAAGCCA--TAGCAGCA-CCCTCCAAGG-CTCTGCATCAGCTCCTGCCTC  1086

seq1  CAGGCCC  1107
      |||||||
seq2  CAGGCCC  1093