BAC Information

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BAC

Clone NameB6Ng01-164E22
Chromosome14 (Build37)
Map Location 42,992,001 - 42,993,106
singlet/doubletsinglet
Overlap geneLOC100040771
Upstream geneSftpd, LOC666093, EG666099, LOC100040545, LOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722, LOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759
Downstream geneEG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164E22.bB6Ng01-164E22.g
ACCDH956669DH956670
length1,1541,094
definitionDH956669|Mus musculus domesticus DNA, BAC clone: B6Ng01-164E22, 5' end.DH956670|Mus musculus domesticus DNA, BAC clone: B6Ng01-164E22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatcttcacaatg
gagtactactcaactattaaaaagaatgaatttatgaaatttctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggatactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaaggctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
tggagagctagagaaagtacccaaggagcttaagggatctgcaacctata
gttggaacaacatatgactaaccagtacccggagctctgactctagctgc
atatgtatcaaagaatgctagtcgcatcacttgaagagagcattgaaccg
caaactttatgcccagttaaggactcagggccaaagggggatgtggtggt
aagg
gaattcatgtagcaatatgaacaaaggattatccctgccttaaaactaag
agggaaaaaaaaaagccttaaaactgaggaccaaagcctgtgggacagtc
tagtagaaacatttcacagaactagtgtattcctttaggctcatctaaga
gttcttgagggtcaactatctccatttggtcccctcgctctgctgtcctc
tgcccaagataataagtttaatcagtaccaataggacccagttggaagga
gcaaggatgtgtcatacaatttccttgggaattccagatacagccttttt
gcacatgatacttgattgcttagttcagaggatgatttactctttgggcc
atgctctaccacaggatgaatattgaatttaccatcattaaatcacaaca
tgagaagacaatgttggatatggagaaaatgacacagtcaataagtgata
ccattgagaagtacaaggaattcatagaagataacgattcctacaggtga
gtcccagacacagctgagacccagcactaggcagggaatgcttgtggcct
tctgggactttgtacaaaagtaaaagctctagttctatactctctgtttc
ttaataggagccctcccttgagtcatgggtcttggatttgtacctcttgg
actcagttttcctaagtgtgaatattgtccaagaccctccagtctttatt
cttccaaattcaggatcttctgcatcgaaaccatttccaccatgctggga
atctcaagcaaccctgacctctagggttctgacagcagattacaagatct
gggatccatgacaaaaatggaaagagtttataccttttgggtcttctctc
tccctaagagggcattgccctctccctactgatggttttctggtactaca
cacatatgagcaaccatgaggaagttttcctctctgtgatgtatatggac
actctggtgtagggtatcagaaatatttgagactgtacatgtggctggtc
tctgatttgactgcctctatttggtacttatggatatcagtgactctagt
ctcgggctttcttggggaacagagccttgcaagaacataatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_42992001_42993106
seq2: B6Ng01-164E22.g_65_1158

seq1  GAATTCATGTAGCAATATGAACAAAGGATTATCCCTGCCTTAAAACTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTAGCAATATGAACAAAGGATTATCCCTGCCTTAAAACTAAG  50

seq1  AGGGAAAAAAAAAAGCCTTAAAACTGAGGACCAAAGCCTGTGGGACAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAAAAAAAAGCCTTAAAACTGAGGACCAAAGCCTGTGGGACAGTC  100

seq1  TAGTAGAAACATTTCACAGAACTAGTGTATTCCTTTAGGCTCATCTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGAAACATTTCACAGAACTAGTGTATTCCTTTAGGCTCATCTAAGA  150

seq1  GTTCTTGAGGGTCAACTATCTCCATTTGGTCCCCTCGCTCTGCTGTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGAGGGTCAACTATCTCCATTTGGTCCCCTCGCTCTGCTGTCCTC  200

seq1  TGCCCAAGATAATAAGTTTAATCAGTACCAATAGGACCCAGTTGGAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAAGATAATAAGTTTAATCAGTACCAATAGGACCCAGTTGGAAGGA  250

seq1  GCAAGGATGTGTCATACAATTTCCTTGGGAATTCCAGATACAGCCTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGATGTGTCATACAATTTCCTTGGGAATTCCAGATACAGCCTTTTT  300

seq1  GCACATGATACTTGATTGCTTAGTTCAGAGGATGATTTACTCTTTGGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGATACTTGATTGCTTAGTTCAGAGGATGATTTACTCTTTGGGCC  350

seq1  ATGCTCTACCACAGGATGAATATTGAATTTACCATCATTAAATCACAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTACCACAGGATGAATATTGAATTTACCATCATTAAATCACAACA  400

seq1  TGAGAAGACAATGTTGGATATGGAGAAAATGACACAGTCAATAAGTGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGACAATGTTGGATATGGAGAAAATGACACAGTCAATAAGTGATA  450

seq1  CCATTGAGAAGTACAAGGAATTCATAGAAGATAACGATTCCTACAGGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGAGAAGTACAAGGAATTCATAGAAGATAACGATTCCTACAGGTGA  500

seq1  GTCCCAGACACAGCTGAGACCCAGCACTAGGCAGGGAATGCTTGTGGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGACACAGCTGAGACCCAGCACTAGGCAGGGAATGCTTGTGGCCT  550

seq1  TCTGGGACTTTGTACAAAAGTAAAAGCTCTAGTTCTATACTCTCTGTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGACTTTGTACAAAAGTAAAAGCTCTAGTTCTATACTCTCTGTTTC  600

seq1  TTAATAGGAGCCCTCCCTTGAGTCATGGGTCTTGGATTTGTACCTCTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGGAGCCCTCCCTTGAGTCATGGGTCTTGGATTTGTACCTCTTGG  650

seq1  ACTCAGTTTTCCTAAGTGTGAATATTGTCCAAGACCCTCCAGTCTTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTTTTCCTAAGTGTGAATATTGTCCAAGACCCTCCAGTCTTTATT  700

seq1  CTTCCAAATTCAGGATCTTCTGCATCGAAACCATTTCCACCATGCTGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAATTCAGGATCTTCTGCATCGAAACCATTTCCACCATGCTGGGA  750

seq1  ATCTCAAGCAACCCTGACCTCTAGGGTTCTGACAGCAGATTACAAGATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAGCAACCCTGACCTCTAGGGTTCTGACAGCAGATTACAAGATCT  800

seq1  GGGATCCATGACAAAAATGGAAAGAGTTTATACCTTTTGGGTCTTCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCCATGACAAAAATGGAAAGAGTTTATACCTTTTGGGTCTTCTCTC  850

seq1  TCCCTAAGAGGGCATTGCCCTCTCCCTACTGATGGTTTTCTGGTACTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAGAGGGCATTGCCCTCTCCCTACTGATGGTTTTCTGGTACTACA  900

seq1  CACATATGAGCAACCATGAGGAAGTTTTCCTCTTCTGTGATGTATATGGA  950
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  CACATATGAGCAACCATGAGGAAGTTTTCCTC-TCTGTGATGTATATGG-  948

seq1  ACACTCTTGGTGTAGGGTTATCAGAAATATTTTGAGACTTGTTACATGTG  1000
      |||||| |||||||||| ||||||||||| |||||||||   ||||||||
seq2  ACACTC-TGGTGTAGGG-TATCAGAAATA-TTTGAGACT--GTACATGTG  993

seq1  GCTGGTCTCTGGATTTGACCTGCCTCTATTTGGTACTTATGGATATACAG  1050
      |||||||||| ||||||| ||||||||||||||||||||||||||| |||
seq2  GCTGGTCTCT-GATTTGA-CTGCCTCTATTTGGTACTTATGGATAT-CAG  1040

seq1  TGGACTCTAGTCTCGGGCTTTC-TGGGGATCAGAGCCCTTGCAGGGATCA  1099
      | |||||||||||||||||||| |||||| ||||| |||||||  || ||
seq2  T-GACTCTAGTCTCGGGCTTTCTTGGGGAACAGAG-CCTTGCA-AGAACA  1087

seq1  TAATATT  1106
      |||||||
seq2  TAATATT  1094