BAC Information

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BAC

Clone NameB6Ng01-164G14
Chromosome14 (Build37)
Map Location 102,492,847 - 102,649,962
singlet/doubletdoublet
Overlap genenone
Upstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
Downstream geneLOC669278, Kctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164G14.bB6Ng01-164G14.g
ACCDH956741DH956742
length1,1451,107
definitionDH956741|Mus musculus domesticus DNA, BAC clone: B6Ng01-164G14, 5' end.DH956742|Mus musculus domesticus DNA, BAC clone: B6Ng01-164G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,648,812 - 102,649,962)(102,492,847 - 102,493,951)
sequence
gaattctttagtatttttttataccattaaataatcttaccatcacttca
agcaagagaagcagaattaaagagtacattagtatggatacatgctattt
agctcatcagtaacattagttaatacctctgcagttataattggaataca
taatctccatccccattaagtcttattctagtcccagcaggctctcaaag
caactaattaacacaaaggtcattgttctcatttttagaataccaacaga
ttataaaggcacaacacagattatgctgcttggtttgcaaagacaccaca
gaaaataatcttctgctccaggagtaaagagaagtggaatgagtccattc
taaccatgtctgtacaacggccaaaatttaatatagataaagggaaacat
tacaatatcaatgttgccagggagactgggaagacgcttcagtggataga
gtgcaggcaaatgagcatgaggacatcagcttgtctctccggcacctgaa
taaagctagttatagacgtgtgtgcctgtaaccatggtgctaatggtcag
agacaggcagatcctgaatgctcaatttagccaaaatcccgagttccaag
ttcagtgagaaaccctgaatcaaaattagatggagaagcagttgagaaag
acaccaaagcagtaatgtttggcctccatgtaagtgaatgtacctttgta
cacacatgcacacaaatgcatgttcccgacacacatgcacacaaaggatt
tctggataaaaaacattattgggagaaactggctgtccagtgcctagggc
atctctaagattctatcaatgaaagcgatccagttcctcctctcagccaa
gtgagagctcggttaacaaatcgttatcacctactttactattagcaatg
tgcagtgcggaagaagcattagagaacgtagagacagataatttaaacat
tatggttaatttccatcacttgatgaagcagggaattgagcagagatttc
ttcaagctgagaggatctgggagaccttcctaatttaaccagccatataa
taatgcataagaagatcatcctgtctggatcaatagcagcctgatgcagg
aaagattcacatgattctgagatgatcagattgagaatgcaggat
gaattcctgttgatgtgggtgaggttagtgtccttgtcagaagatgaaac
atcataggtttctctttccatcaagtatgaaggtgtccataagctagaaa
gagagttctcctgaatcaactctgctttgactttgatcttacccttccag
ccttcagaaatacaagaaagcaatcctgtgcaagccattcagtctgagtt
tctgctgtagtttcacagagtgacaagttcagtggcatgccacatttgta
atcagaatatctgaaattaccatacttttgctacttcatggcttgggtag
agtatgatatagaaagaaagaaggtttgaagcactttagatgaaactaac
aatttctgggaaaataattgatagtagttaaattgttcatcattactttt
aatccttaagctattgacttgaaaataaaatctcaaatgatctaaaattt
caaagcaatgcagcataaattaatttcaaatttaatttgtctttttagtt
ttgtgtaatttttttgcataagttttgtatattttatagcatttagtaat
tttccaatttatttccatacagacttaaaagaaactgttagactatttct
gtataatagtgaaaggagcatacattctagaaataacctgtgttatttat
gcaaaactgtggcagtctaatttgcatatgtataagccattcagggaacc
gggagaggggtaggagaaattgcaaaaatgagaaatacatttcaagtcag
catactgtagaactttatatagcatttgaatatgaaaaaattaagaattg
tcaggcaaaaaattaaactctttttttcatgttgaccctaactgggtttt
aagagctcaatgacatttccattatacaaactggaatatctgttcaagtt
ccagatatcattatcaaatttaatttattgaagatatttctgcctaggga
gtatgtgttgtgactcttttttttttttttttttttttttttgggtaggg
ctagctatctggagacatcaattgaactgacctgaattttgaacaggtgg
attccctcaggaattttgtcaccttgggaatatggatccacccactgact
tttaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102648812_102649962
seq2: B6Ng01-164G14.b_44_1188 (reverse)

seq1  ATCCTGCTCATTCTCAA--GGATCATGTGAAAATC--------TTTTCCT  40
      ||||||  |||||||||   |||||| | | ||||         ||||||
seq2  ATCCTG--CATTCTCAATCTGATCATCTCAGAATCATGTGAATCTTTCCT  48

seq1  GCATCCAGGGTTGGCTATTTGATCCAGACAGGAATTAATC-TCTTATGCA  89
      |||| |||| |  |||| |||||||||||||||  | ||| |||||||||
seq2  GCAT-CAGGCT--GCTA-TTGATCCAGACAGGA--TGATCTTCTTATGCA  92

seq1  TTTATTATATGGCTGGGTAAATTAGGAAGGTCTCCCAGATTCCTTCTCAG  139
       ||||||||||||||| |||||||||||||||||||||||  | ||||||
seq2  -TTATTATATGGCTGGTTAAATTAGGAAGGTCTCCCAGAT--CCTCTCAG  139

seq1  CTTGAAGAAATCTCTGCTTCAATTTCCCTGCTTCAATCAAGTGATGGAAA  189
      ||||||||||||||||| |||| ||||||||||| |||||||||||||||
seq2  CTTGAAGAAATCTCTGC-TCAA-TTCCCTGCTTC-ATCAAGTGATGGAAA  186

seq1  TTAACCATAATGTTTAAATTATCTTGTCTCTACGTTCTCTAATGCTTTCT  239
      ||||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  TTAACCATAATGTTTAAATTATC-TGTCTCTACGTTCTCTAATGC-TTCT  234

seq1  TCCGCACCTGCACATTGCTAATAGTAAAGTAGGTGATAACGATTTGTTAA  289
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCA-CTGCACATTGCTAATAGTAAAGTAGGTGATAACGATTTGTTAA  283

seq1  CCGAGCTCTCACTTGGCTGAGAGGAGGAACTGGATCGCTTTCATTGATAG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGCTCTCACTTGGCTGAGAGGAGGAACTGGATCGCTTTCATTGATAG  333

seq1  AATCTTAGAGATGCCCTAGGCACTGGACAGCCAGTTTCTCCCAATAATGT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTAGAGATGCCCTAGGCACTGGACAGCCAGTTTCTCCCAATAATGT  383

seq1  TTTTTATCCAGAAATCCTTTGTGTGCATGTGTGTCGGGAACATGCATTTG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCCAGAAATCCTTTGTGTGCATGTGTGTCGGGAACATGCATTTG  433

seq1  TGTGCATGTGTGTACAAAGGTACATTCACTTACATGGAGGCCAAACATTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGTGTGTACAAAGGTACATTCACTTACATGGAGGCCAAACATTA  483

seq1  CTGCTTTGGTGTCTTTCTCAACTGCTTCTCCATCTAATTTTGATTCAGGG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTGGTGTCTTTCTCAACTGCTTCTCCATCTAATTTTGATTCAGGG  533

seq1  TTTCTCACTGAACTTGGAACTCGGGATTTTGGCTAAATTGAGCATTCAGG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACTGAACTTGGAACTCGGGATTTTGGCTAAATTGAGCATTCAGG  583

seq1  ATCTGCCTGTCTCTGACCATTAGCACCATGGTTACAGGCACACACGTCTA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCTGTCTCTGACCATTAGCACCATGGTTACAGGCACACACGTCTA  633

seq1  TAACTAGCTTTATTCAGGTGCCGGAGAGACAAGCTGATGTCCTCATGCTC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGCTTTATTCAGGTGCCGGAGAGACAAGCTGATGTCCTCATGCTC  683

seq1  ATTTGCCTGCACTCTATCCACTGAAGCGTCTTCCCAGTCTCCCTGGCAAC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTGCACTCTATCCACTGAAGCGTCTTCCCAGTCTCCCTGGCAAC  733

seq1  ATTGATATTGTAATGTTTCCCTTTATCTATATTAAATTTTGGCCGTTGTA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATATTGTAATGTTTCCCTTTATCTATATTAAATTTTGGCCGTTGTA  783

seq1  CAGACATGGTTAGAATGGACTCATTCCACTTCTCTTTACTCCTGGAGCAG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATGGTTAGAATGGACTCATTCCACTTCTCTTTACTCCTGGAGCAG  833

seq1  AAGATTATTTTCTGTGGTGTCTTTGCAAACCAAGCAGCATAATCTGTGTT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTATTTTCTGTGGTGTCTTTGCAAACCAAGCAGCATAATCTGTGTT  883

seq1  GTGCCTTTATAATCTGTTGGTATTCTAAAAATGAGAACAATGACCTTTGT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTTATAATCTGTTGGTATTCTAAAAATGAGAACAATGACCTTTGT  933

seq1  GTTAATTAGTTGCTTTGAGAGCCTGCTGGGACTAGAATAAGACTTAATGG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTAGTTGCTTTGAGAGCCTGCTGGGACTAGAATAAGACTTAATGG  983

seq1  GGATGGAGATTATGTATTCCAATTATAACTGCAGAGGTATTAACTAATGT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGATTATGTATTCCAATTATAACTGCAGAGGTATTAACTAATGT  1033

seq1  TACTGATGAGCTAAATAGCATGTATCCATACTAATGTACTCTTTAATTCT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATGAGCTAAATAGCATGTATCCATACTAATGTACTCTTTAATTCT  1083

seq1  GCTTCTCTTGCTTGAAGTGATGGTAAGATTATTTAATGGTATAAAAAAAT  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTTGCTTGAAGTGATGGTAAGATTATTTAATGGTATAAAAAAAT  1133

seq1  ACTAAAGAATTC  1151
      ||||||||||||
seq2  ACTAAAGAATTC  1145

seq1: chr14_102492847_102493951
seq2: B6Ng01-164G14.g_67_1173

seq1  GAATTCCTGTTGATGTGGGTGAGGTTAGTGTCCTTGTCAGAAGATGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTGATGTGGGTGAGGTTAGTGTCCTTGTCAGAAGATGAAAC  50

seq1  ATCATAGGTTTCTCTTTCCATCAAGTATGAAGGTGTCCATAAGCTAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGGTTTCTCTTTCCATCAAGTATGAAGGTGTCCATAAGCTAGAAA  100

seq1  GAGAGTTCTCCTGAATCAACTCTGCTTTGACTTTGATCTTACCCTTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTCTCCTGAATCAACTCTGCTTTGACTTTGATCTTACCCTTCCAG  150

seq1  CCTTCAGAAATACAAGAAAGCAATCCTGTGCAAGCCATTCAGTCTGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGAAATACAAGAAAGCAATCCTGTGCAAGCCATTCAGTCTGAGTT  200

seq1  TCTGCTGTAGTTTCACAGAGTGACAAGTTCAGTGGCATGCCACATTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTAGTTTCACAGAGTGACAAGTTCAGTGGCATGCCACATTTGTA  250

seq1  ATCAGAATATCTGAAATTACCATACTTTTGCTACTTCATGGCTTGGGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAATATCTGAAATTACCATACTTTTGCTACTTCATGGCTTGGGTAG  300

seq1  AGTATGATATAGAAAGAAAGAAGGTTTGAAGCACTTTAGATGAAACTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGATATAGAAAGAAAGAAGGTTTGAAGCACTTTAGATGAAACTAAC  350

seq1  AATTTCTGGGAAAATAATTGATAGTAGTTAAATTGTTCATCATTACTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGGGAAAATAATTGATAGTAGTTAAATTGTTCATCATTACTTTT  400

seq1  AATCCTTAAGCTATTGACTTGAAAATAAAATCTCAAATGATCTAAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTAAGCTATTGACTTGAAAATAAAATCTCAAATGATCTAAAATTT  450

seq1  CAAAGCAATGCAGCATAAATTAATTTCAAATTTAATTTGTCTTTTTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAATGCAGCATAAATTAATTTCAAATTTAATTTGTCTTTTTAGTT  500

seq1  TTGTGTAATTTTTTTGCATAAGTTTTGTATATTTTATAGCATTTAGTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAATTTTTTTGCATAAGTTTTGTATATTTTATAGCATTTAGTAAT  550

seq1  TTTCCAATTTATTTCCATACAGACTTAAAAGAAACTGTTAGACTATTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATTTATTTCCATACAGACTTAAAAGAAACTGTTAGACTATTTCT  600

seq1  GTATAATAGTGAAAGGAGCATACATTCTAGAAATAACCTGTGTTATTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATAGTGAAAGGAGCATACATTCTAGAAATAACCTGTGTTATTTAT  650

seq1  GCAAAACTGTGGCAGTCTAATTTGCATATGTATAAGCCATTCAGGGAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACTGTGGCAGTCTAATTTGCATATGTATAAGCCATTCAGGGAACC  700

seq1  GGGAGAGGGGTAGGAGAAATTGCAAAAATGAGAAATACATTTCAAGTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGGGGTAGGAGAAATTGCAAAAATGAGAAATACATTTCAAGTCAG  750

seq1  CATACTGTAGAACTTTATATAGCATTTGAATATGAAAAAATTAAGAATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGTAGAACTTTATATAGCATTTGAATATGAAAAAATTAAGAATTG  800

seq1  TCAGGCAAAAAATTAAACTCTTTTTTTCATGTTGACCCTAACTGGGTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAAAAAATTAAACTCTTTTTTTCATGTTGACCCTAACTGGGTTTT  850

seq1  AAGAGCTCAATGACATTTCCATTATTACAAACTGGAATATCTGTTCAAGT  900
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AAGAGCTCAATGACATTTCCATTA-TACAAACTGGAATATCTGTTCAAGT  899

seq1  TCCAGATATCA-TATCAAAATTTAATTTATTGAAGATAATTCTGCCTAGG  949
      ||||||||||| |||| ||||||||||||||||||||| |||||||||||
seq2  TCCAGATATCATTATC-AAATTTAATTTATTGAAGATATTTCTGCCTAGG  948

seq1  GAAGTATGGTGTGTGACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGT  999
      | ||||||   |||||||| ||||||||||||||||||||||||||||||
seq2  G-AGTATGTGTTGTGACTC-TTTTTTTTTTTTTTTTTTTTTTTTTTGGGT  996

seq1  A-GGCATGCTTTCTGGAGCAATCAATTTGACGGA-CTGAATTTTG-ACAG  1046
      | |||  ||| |||||||  |||||||  || || |||||||||| ||||
seq2  AGGGCTAGCTATCTGGAGACATCAATTGAACTGACCTGAATTTTGAACAG  1046

seq1  GT-GATTCCCCAAGGACTTCTGTACACCTTGGGAATAT-GAACCAGCCAC  1094
      || |||||||  |||| || ||| |||||||||||||| || ||| ||||
seq2  GTGGATTCCCTCAGGAATTTTGT-CACCTTGGGAATATGGATCCACCCAC  1095

seq1  TGAC-TTTAGGT  1105
      |||| |||||||
seq2  TGACTTTTAGGT  1107