BAC Information

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BAC

Clone NameB6Ng01-165B21
Chromosome14 (Build37)
Map Location 58,938,920 - 59,132,865
singlet/doubletdoublet
Overlap genenone
Upstream geneCryl1, LOC668090, AU040096, Ift88, Il17d, N6amt2, Xpo4, Lats2, Sap18, F630043A04Rik, Mrp63, Zdhhc20, Efha1, LOC668160, Fgf9, LOC100043554
Downstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165B21.bB6Ng01-165B21.g
ACCDH957260DH957261
length7421,145
definitionDH957260|Mus musculus domesticus DNA, BAC clone: B6Ng01-165B21, 5' end.DH957261|Mus musculus domesticus DNA, BAC clone: B6Ng01-165B21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,132,128 - 59,132,865)(58,938,920 - 58,940,064)
sequence
gaattcaatatccaatatggggggtggggtggtgttggacaggctcaaag
aaaaagatcttaaaagatggttgtctggggtcactcaacgtaaataccta
caacatctaagaaaaatgtcttgcttcaattttaagtaattatgctgcat
tttcttcctgtgcctaccatctcattaagcctgcgtgaaatgcataatta
ccacactacacaggtgagctgactttgctggtatgtgcatgaaagtctca
cattaatttcctatggaggacccccagggcaggaacagggcacatccagc
ttgtacactccactcctaatgcagtgcatataacagggcgcacattccaa
agaggatctccagctctagatctgtcacaggaaaacatcctgtttatgtc
aacctccatcctgaaaggagagagtagctagacaccacataccattgtct
ctggccaatgctgtcagtcagaccccagcatcggcccagttactgactca
gccaacctcaaacaccgctgtcatcccctgatttctactttactaatata
gcctgagagatatttctagtatactatcaatgatgtcttcatttacagtc
aaaacaagatcctgctttatttatataccataccccctttgctttctgac
cagagaattgtttacaagtggcaattctccagcctcttaactaaattttc
agggaaagtgaggaagggggtgtatcatcctgtacgcaaagc
gaattcatatgtggtccattgactgggggcaattctgatgtatggcaata
tcagaaccaccagcaaaagccactgagtcttcagttctgtgggcacatga
ccacctgcagatctagttaaagccaagctttcatcttgtggggctgaggg
actggacagggctgaaatttttttctgacgtgctttcaggtacagccatc
actacggacacagtgcaccccttggaaatggacaaagatcaacctcagct
tctccacatgtggatggaatttgtttgaatcaaaaatctaaacagcagca
acaacaacaaacaggcatactcttcttgaatgaacctgttaacacttgca
atcctgaatggaagacccctagaatctgtctacctgtgttcattgtgact
atcctttggcagacggtaggcaatcagtaattgtcgcaggaagaatgaat
gatgaccccaagaccccccaaggacattacctgagctgtcatgcagccca
gctctgccaaatcttttctatggagaaagtgaagatttgggaagcaagag
agagacccgaacagagacaggtgaccccagagacctacaggaagagtcag
aaaattcttggcacttgatccctctagggatgctggatgcttttgctgca
gtcaatgcttggctcatttccccacccgtcctgcttaaactcaccatttt
aatcaattttcctgtagccaatgactctgtgaactcagacctaatcattt
ttgctaaatctcatttctttccaaacactttccttaattacaatggaggt
agaaagacacaggcttttgctggccaggaacctcctgggactgctgttgg
cagcctttgctatgggggaagagagcaaggaggagaagatctcttgtccc
tgtctgtagagggcttttctcccctggcctgcatgcctgcctcctgtgct
tcaggtttcatctttcattaggacaaataaaccttttcctcccacaactt
attccaccactccttccattctcctggggcctggaaatacctctttgggg
cttaagatagaactctcactaaccattttcacacaccctgagtctctttc
tagtgggtttcttttggaatgccaaggacaggcgctgtagactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_59132128_59132865
seq2: B6Ng01-165B21.b_49_790 (reverse)

seq1  GCTTTGCGTACAGGATGATACA-CCCCTTCCTCACCTTCCCTG-AAATTT  48
      |||||||||||||||||||||| |||||||||||| ||||||| ||||||
seq2  GCTTTGCGTACAGGATGATACACCCCCTTCCTCACTTTCCCTGAAAATTT  50

seq1  AGTTAAGAGGCTGGAGAATTGCCAC-TGTAAACAATTCTCTGGTCAGAAA  97
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGTTAAGAGGCTGGAGAATTGCCACTTGTAAACAATTCTCTGGTCAGAAA  100

seq1  GCAAA-GGGGTATGGTATATAAATAAAGCAGGATCTTGTTTTGACTGTAA  146
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGGGGTATGGTATATAAATAAAGCAGGATCTTGTTTTGACTGTAA  150

seq1  ATGAAGACATCATTGATAGTATACTAGAAATATCTCTCAGGCTATATTAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACATCATTGATAGTATACTAGAAATATCTCTCAGGCTATATTAG  200

seq1  TAAAGTAGAAATCAGGGGATGACAGCGGTGTTTGAGGTTGGCTGAGTCAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAGAAATCAGGGGATGACAGCGGTGTTTGAGGTTGGCTGAGTCAG  250

seq1  TAACTGGGCCGATGCTGGGGTCTGACTGACAGCATTGGCCAGAGACAATG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGGCCGATGCTGGGGTCTGACTGACAGCATTGGCCAGAGACAATG  300

seq1  GTATGTGGTGTCTAGCTACTCTCTCCTTTCAGGATGGAGGTTGACATAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGGTGTCTAGCTACTCTCTCCTTTCAGGATGGAGGTTGACATAAA  350

seq1  CAGGATGTTTTCCTGTGACAGATCTAGAGCTGGAGATCCTCTTTGGAATG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGTTTTCCTGTGACAGATCTAGAGCTGGAGATCCTCTTTGGAATG  400

seq1  TGCGCCCTGTTATATGCACTGCATTAGGAGTGGAGTGTACAAGCTGGATG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCCCTGTTATATGCACTGCATTAGGAGTGGAGTGTACAAGCTGGATG  450

seq1  TGCCCTGTTCCTGCCCTGGGGGTCCTCCATAGGAAATTAATGTGAGACTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGTTCCTGCCCTGGGGGTCCTCCATAGGAAATTAATGTGAGACTT  500

seq1  TCATGCACATACCAGCAAAGTCAGCTCACCTGTGTAGTGTGGTAATTATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCACATACCAGCAAAGTCAGCTCACCTGTGTAGTGTGGTAATTATG  550

seq1  CATTTCACGCAGGCTTAATGAGATGGTAGGCACAGGAAGAAAATGCAGCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCACGCAGGCTTAATGAGATGGTAGGCACAGGAAGAAAATGCAGCA  600

seq1  TAATTACTTAAAATTGAAGCAAGACATTTTTCTTAGATGTTGTAGGTATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACTTAAAATTGAAGCAAGACATTTTTCTTAGATGTTGTAGGTATT  650

seq1  TACGTTGAGTGACCCCAGACAACCATCTTTTAAGATCTTTTTCTTTGAGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTTGAGTGACCCCAGACAACCATCTTTTAAGATCTTTTTCTTTGAGC  700

seq1  CTGTCCAACACCACCCCACCCCCCATATTGGATATTGAATTC  738
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCAACACCACCCCACCCCCCATATTGGATATTGAATTC  742

seq1: chr14_58938920_58940064
seq2: B6Ng01-165B21.g_70_1214

seq1  GAATTCATATGTGGTCCATTGACTGGGGGCAATTCTGATGTATGGCAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGTGGTCCATTGACTGGGGGCAATTCTGATGTATGGCAATA  50

seq1  TCAGAACCACCAGCAAAAGCCACTGAGTCTTCAGTTCTGTGGGCACATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACCACCAGCAAAAGCCACTGAGTCTTCAGTTCTGTGGGCACATGA  100

seq1  CCACCTGCAGATCTAGTTAAAGCCAAGCTTTCATCTTGTGGGGCTGAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGCAGATCTAGTTAAAGCCAAGCTTTCATCTTGTGGGGCTGAGGG  150

seq1  ACTGGACAGGGCTGAAATTTTTTTCTGACGTGCTTTCAGGTACAGCCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACAGGGCTGAAATTTTTTTCTGACGTGCTTTCAGGTACAGCCATC  200

seq1  ACTACGGACACAGTGCACCCCTTGGAAATGGACAAAGATCAACCTCAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACGGACACAGTGCACCCCTTGGAAATGGACAAAGATCAACCTCAGCT  250

seq1  TCTCCACATGTGGATGGAATTTGTTTGAATCAAAAATCTAAACAGCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACATGTGGATGGAATTTGTTTGAATCAAAAATCTAAACAGCAGCA  300

seq1  ACAACAACAAACAGGCATACTCTTCTTGAATGAACCTGTTAACACTTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAAACAGGCATACTCTTCTTGAATGAACCTGTTAACACTTGCA  350

seq1  ATCCTGAATGGAAGACCCCTAGAATCTGTCTACCTGTGTTCATTGTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAATGGAAGACCCCTAGAATCTGTCTACCTGTGTTCATTGTGACT  400

seq1  ATCCTTTGGCAGACGGTAGGCAATCAGTAATTGTCGCAGGAAGAATGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTGGCAGACGGTAGGCAATCAGTAATTGTCGCAGGAAGAATGAAT  450

seq1  GATGACCCCAAGACCCCCCAAGGACATTACCTGAGCTGTCATGCAGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCCCAAGACCCCCCAAGGACATTACCTGAGCTGTCATGCAGCCCA  500

seq1  GCTCTGCCAAATCTTTTCTATGGAGAAAGTGAAGATTTGGGAAGCAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCCAAATCTTTTCTATGGAGAAAGTGAAGATTTGGGAAGCAAGAG  550

seq1  AGAGACCCGAACAGAGACAGGTGACCCCAGAGACCTACAGGAAGAGTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCCGAACAGAGACAGGTGACCCCAGAGACCTACAGGAAGAGTCAG  600

seq1  AAAATTCTTGGCACTTGATCCCTCTAGGGATGCTGGATGCTTTTGCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTTGGCACTTGATCCCTCTAGGGATGCTGGATGCTTTTGCTGCA  650

seq1  GTCAATGCTTGGCTCATTTCCCCACCCGTCCTGCTTAAACTCACCATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGCTTGGCTCATTTCCCCACCCGTCCTGCTTAAACTCACCATTTT  700

seq1  AATCAATTTTCCTGTAGCCAATGACTCTGTGAACTCAGACCTAATCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATTTTCCTGTAGCCAATGACTCTGTGAACTCAGACCTAATCATTT  750

seq1  TTGCTAAATCTCATTTCTTTCCAAACACTTTCCTTAATTACAATGGAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAATCTCATTTCTTTCCAAACACTTTCCTTAATTACAATGGAGGT  800

seq1  AGAAAGACACAGGCTTTTGCTGGCCAGGAACCTCCTGGGACTGCTGTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACACAGGCTTTTGCTGGCCAGGAACCTCCTGGGACTGCTGTTGG  850

seq1  CAGCCTTTGCTATGGGGGAAGAGAGCAAGGAGGAGAAGATCTCTTGTCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTGCTATGGGGGAAGAGAGCAAGGAGGAGAAGATCTCTTGTCCC  900

seq1  TGTCTGTAGAGGGCTTTTCTCCCCCTGGCCTGCATGCCTGCCTTCCTGTG  950
      |||||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  TGTCTGTAGAGGGCTTTTCT-CCCCTGGCCTGCATGCCTGCC-TCCTGTG  948

seq1  CTTCCAGGTTTTCATCTTTCATTTAGACAAATAAACCCTTTCCTCCCAAC  1000
      ||| |||| ||||||||||||||  |||||||||||| ||||||||||  
seq2  CTT-CAGG-TTTCATCTTTCATTAGGACAAATAAACCTTTTCCTCCCA--  994

seq1  CAACTTATTCCACCACTCC-TCCATTCTCCTGGGCCTTGAATATA-CTCT  1048
      ||||||||||||||||||| |||||||||||||| | || | ||| ||||
seq2  CAACTTATTCCACCACTCCTTCCATTCTCCTGGGGCCTGGAAATACCTCT  1044

seq1  TGTGGG--TTAGATAG-ACTCT-ACTAACCCTTTTC-CACAACCTAGTGC  1093
      |  |||  | |||||| ||||| ||||||| ||||| |||| ||| | | 
seq2  TTGGGGCTTAAGATAGAACTCTCACTAACCATTTTCACACACCCT-GAGT  1093

seq1  CTCTTTCTAGTGGGTTTCTTTTCTGATTGCCAAGGCACAG--GCTGCTGA  1141
      ||||||||||||||||||||||  || |||||||| ||||  ||||  ||
seq2  CTCTTTCTAGTGGGTTTCTTTT-GGAATGCCAAGG-ACAGGCGCTGTAGA  1141

seq1  CTCT  1145
      ||||
seq2  CTCT  1145