BAC Information

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BAC

Clone NameB6Ng01-165I19
Chromosome14 (Build37)
Map Location 57,319,692 - 57,320,702
singlet/doubletsinglet
Overlap genenone
Upstream geneTgm1, Rabggta, Dhrs1, 2610027L16Rik, Cideb, Ltb4r2, Ltb4r1, Adcy4, Ripk3, Nfatc4, BC030046, Cbln3, 9130227C08Rik, 2310014G06Rik, Cma1, Cma2, LOC100042759, EG545056, Mcpt1, Mcpt9, Mcpt2, Mcpt4, Mcpt8, Ctsg, Gzme, Gzmd, Gzmg, LOC672095, Gzmn, LOC100042770, LOC668072, LOC668074, Gzmf, Gzmc, LOC219102, Gzmb, LOC668082, Atp12a, Rnf17, Cenpj, Parp4, LOC100042788, 4930548G07Rik
Downstream genePspc1, LOC100043499, 9830124H08Rik, LOC100042797, LOC219106, LOC668118, Zmym2, LOC100042817, B020004C17Rik, Gja3, Gjb2, LOC100043515, Gjb6, LOC668140, Cryl1, LOC668090, AU040096, Ift88, Il17d, N6amt2, Xpo4, Lats2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165I19.bB6Ng01-165I19.g
ACCDH957580DH957581
length4451,006
definitionDH957580|Mus musculus domesticus DNA, BAC clone: B6Ng01-165I19, 5' end.DH957581|Mus musculus domesticus DNA, BAC clone: B6Ng01-165I19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atataaacagcatagtttatctttatgatgatatgcaggaaatctgatca
ctagagtgggctaatgtttggaaactaaaaaggggcctgggaaagagggg
gtagggaggatagcccacgtctggccagagttccacctatgctctgggca
ggtggatgtgggagggctgccaggtgggcattcaagcctctgacccactc
gacaggggatggacaaggggtagccccctacctgggtgcccctggggcca
taccctgtatccctggggttctgagagagagggctgagggaagagaggtt
cccacacagatgagagtgagtgcagctgaacagagactgtctatggtttc
agagcttcattatagaaaggcagggggaaagagagaaggtagaaaagaga
gataccagccatggccaagcggagagggggggggaaaggagagag
gaattcagaactgtaagcagcagcagctcagtttctacacagagaagaga
ctccaactgacccaaagcagcagtgtgagcccagacttcctggcttttaa
actcttctgtattacagcagtggcttcagtagattcatgctgtctcaaca
acctagggagagaaaaattttagacctttaaaattcagacactggctcaa
gtgcccaacaataatcaacacttcacaaagataccattttgtcttacatg
gcctgctttttaaaatcttatttttaaagtttttttttttttgttttttt
taaataaacctaagtacacacaccagaagagggcaccaggtcccattaca
gatggctgagagccaccatgtggatgctggggattgaatcaggacccctg
gaagagcaatcagtgctcgtaaccgctgagccatctctctagctcccatg
acctacttttattttgaagagttatttttattgagggtaattaattactc
tgatccaaaacaatcccaatgtcatctaagaacactggctgaactaagat
ttagactaattttataccatggcaatatttatatattgcctaaattctaa
atgatcttcaaatctgcaactgacaatttttttaaattttacattgtatg
tatgagtgtgtgagcatgtcacaggacaacctctgggaagacattctctt
cttccaccatatcaattccagagatcagactcaggtgagttcatgctcag
caagaaatgcctttagcacagtgccatctcagtgaaaccctttttaagtc
tttaccgtagttcttgttcacaaatgacaagtcccttgacactactttac
aaccctgctgtaggggctcatatgttagagcaccagaagacgggtccaaa
tcctcagcacccatatggtctctgtcaaagtgattataactcagttccag
ggactcaatgccttttggccctggtggtactaagcacccatgtgtaccaa
gagtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_57319692_57320702
seq2: B6Ng01-165I19.g_67_1072

seq1  GAATTCAGAACTGTAAGCAGCAGCAGCTCAGTTTCTACACAGAGAAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACTGTAAGCAGCAGCAGCTCAGTTTCTACACAGAGAAGAGA  50

seq1  CTCCAACTGACCCAAAGCAGCAGTGTGAGCCCAGACTTCCTGGCTTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACTGACCCAAAGCAGCAGTGTGAGCCCAGACTTCCTGGCTTTTAA  100

seq1  ACTCTTCTGTATTACAGCAGTGGCTTCAGTAGATTCATGCTGTCTCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTGTATTACAGCAGTGGCTTCAGTAGATTCATGCTGTCTCAACA  150

seq1  ACCTAGGGAGAGAAAAATTTTAGACCTTTAAAATTCAGACACTGGCTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGGAGAGAAAAATTTTAGACCTTTAAAATTCAGACACTGGCTCAA  200

seq1  GTGCCCAACAATAATCAACACTTCACAAAGATACCATTTTGTCTTACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCAACAATAATCAACACTTCACAAAGATACCATTTTGTCTTACATG  250

seq1  GCCTGCTTTTTAAAATCTTATTTTTAAAGTTTTTTTTTTTTTGTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTTTTTAAAATCTTATTTTTAAAGTTTTTTTTTTTTTGTTTTTTT  300

seq1  TAAATAAACCTAAGTACACACACCAGAAGAGGGCACCAGGTCCCATTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAACCTAAGTACACACACCAGAAGAGGGCACCAGGTCCCATTACA  350

seq1  GATGGCTGAGAGCCACCATGTGGATGCTGGGGATTGAATCAGGACCCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTGAGAGCCACCATGTGGATGCTGGGGATTGAATCAGGACCCCTG  400

seq1  GAAGAGCAATCAGTGCTCGTAACCGCTGAGCCATCTCTCTAGCTCCCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCAATCAGTGCTCGTAACCGCTGAGCCATCTCTCTAGCTCCCATG  450

seq1  ACCTACTTTTATTTTGAAGAGTTATTTTTATTGAGGGTAATTAATTACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTTTATTTTGAAGAGTTATTTTTATTGAGGGTAATTAATTACTC  500

seq1  TGATCCAAAACAATCCCAATGTCATCTAAGAACACTGGCTGAACTAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCAAAACAATCCCAATGTCATCTAAGAACACTGGCTGAACTAAGAT  550

seq1  TTAGACTAATTTTATACCATGGCAATATTTATATATTGCCTAAATTCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTAATTTTATACCATGGCAATATTTATATATTGCCTAAATTCTAA  600

seq1  ATGATCTTCAAATCTGCAACTGACAATTTTTTTAAATTTTACATTGTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTTCAAATCTGCAACTGACAATTTTTTTAAATTTTACATTGTATG  650

seq1  TATGAGTGTGTGAGCATGTCACAGGACAACCTCTGGGAAGACATTCTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTGTGTGAGCATGTCACAGGACAACCTCTGGGAAGACATTCTCTT  700

seq1  CTTCCACCATATCAATTCCAGAGATCAGACTCAGGTGAGTTCATGCTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACCATATCAATTCCAGAGATCAGACTCAGGTGAGTTCATGCTCAG  750

seq1  CAAGAAATGCCTTTAGCACAGTGCCATCTCAGTGAAACCCTTTTTAAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAATGCCTTTAGCACAGTGCCATCTCAGTGAAACCCTTTTTAAGTC  800

seq1  TTTACCGTAGTTCTTGTTCACAAATGACAAGTCCCTTGACACTACTTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCGTAGTTCTTGTTCACAAATGACAAGTCCCTTGACACTACTTTAC  850

seq1  AACCCTGCTGTAGGGGCTCATATGTTAAGAGCACCAGAAGACGGGTCCAA  900
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AACCCTGCTGTAGGGGCTCATATGTT-AGAGCACCAGAAGACGGGTCCAA  899

seq1  AT-CTCAGCACCCATATGGTCTCTTGTCAAAAGTGATTATAAACTCCAGT  949
      || |||||||||||||||||||| |||| ||||||||||| |||| ||||
seq2  ATCCTCAGCACCCATATGGTCTC-TGTC-AAAGTGATTAT-AACT-CAGT  945

seq1  TCCAGGGACTCAATGCCTTTTGGCCTCTGTGGGTACTAAGCACACATGTG  999
      ||||||||||||||||||||||||| |||  |||||||||||| ||||||
seq2  TCCAGGGACTCAATGCCTTTTGGCC-CTGGTGGTACTAAGCACCCATGTG  994

seq1  TACCAAGAGTCC  1011
      ||||||||||||
seq2  TACCAAGAGTCC  1006