BAC Information

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BAC

Clone NameB6Ng01-166A05
Chromosome14 (Build37)
Map Location 77,133,556 - 77,237,965
singlet/doubletdoublet
Overlap genenone
Upstream geneCog3, Slc25a30, LOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik, Tsc22d1, 2810032E02Rik
Downstream geneLOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678, Gm1587, Dnajc15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166A05.bB6Ng01-166A05.g
ACCDH957913DH957914
length1,152967
definitionDH957913|Mus musculus domesticus DNA, BAC clone: B6Ng01-166A05, 5' end.DH957914|Mus musculus domesticus DNA, BAC clone: B6Ng01-166A05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,236,801 - 77,237,965)(77,133,556 - 77,134,524)
sequence
gaattcatttaaaaataatcacaagtttaagggcatcaattagacagact
atataaagctccactccagtgcctgacatagagggttactaactaggctt
gcttatttgcaatttactgctatcattgtttgaaggttactgataagtgg
ttgggtatagcctagtacgatagtgtctatgatgccaatggattagtggc
aaatgtcagattgaactttgtcttttgatcagaggcagtgactgatctag
tcccagactataactcacagactactagttatactttgctgcctcagatc
ttgatggggtaactaaaacaaagagtctgtggtcaaatagaatttgacat
cctgggttgcacaactctggtaatgtttccctagctttgctttcagccgc
tggggtcatcagagcagtgcggtgccatagtccactgtggccctgcatca
gagagctccggaacagaacgcttggcagactttgcatactctagagtctt
ttctcttggatatctccagagacttcccttctgagaaagactttaagaaa
cactttctagatcatactacacacagcagacaccacaatgcccgtttatt
gaggctgattaagttgcgtctatagccaggcctttgttgtgtctaatgga
gaacacacactttcttgttcttttgttagtccagaatggattccaagtct
aaacactggcttctcttgtaagggaaggcaagagaccttccccgtctgtg
tctgcgcacgggatatttctctggtattgatggatggatggaaaatatga
tacatctagagctggttcctggcatcaaataacctaaaaccaaacaagga
gcagccatggaaaatgagagcagaggagaaataaaagccttgaagtccac
gctcctgctgattgttaccacacaagtgaggagcctgctgctcaggcaac
atgcactgccttctgtaattagatggaaactatttgttatgcgtgcttgg
cctgcccagaggaaactcagcgagaacgggaaacctcaaacaaacggggt
gaatcactagtggcaacctgtttaatacgagccaggcatcacactaaaga
attccttcatcctctgcatctactgctgacaccatgttgagaaccgttgt
ct
gaattcacagcttgctctgctcctagtactagaaccgtgagatgggcagg
gattccctcatcccaggggattagtgacccccaaaggacaagtgaccgaa
gtagagagaagcggctgcagaagggttatgtgaaaggagattgggagccc
acgaagaccatgctggccttgagaggaaagaaaaactgaagcatagatgt
tggtttcataagagacccgttggatggtggctattcatgtccaagagcga
caaacgcaaaagttgggcctgggtgggagagtacacaagatgtggttaaa
cacatcactaaggttcctttaaagccacttactggatggacgatgtgtct
ggcaggatggaaggaagctgggggattcagcaactgctctgtttttcctg
ggagtatactttatgtagcctgccaactaacaaatccttatagagccacg
actaagtgtgggcactgggcatccaaactccagccctcatgtctgcatgg
caagccttttcccagccatatgtgaacattccccaggcatgctcagcttt
agacacaaatgagacggacagcacaagaccaggctctgtttcctcagctc
tgtcccccacccacagggctttagtccttttttagtcacctgggccgtgc
tcctatatctgagaattcctaggctgcatcccctcaagttctgtggccag
tttaactgttcagctgtgggtcacagcaccgatgtcagccgtctgttctc
ttagggtcccacagaggtggtcagatgagaatctacttactaataaatca
agttgtaagcaacagaacagttccttctttagatcacacaccaaccacaa
aattgcatagagatgaggctgtgacgactccaccctgccctgtctttgct
tttagagtatcatctcctggagatacagtcttaggagtgtgtgtgtgtgt
gtgtgtgtgtgtgtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77236801_77237965
seq2: B6Ng01-166A05.b_46_1197 (reverse)

seq1  AGACAACAGTTCTTTCAACATGTGGTGCAGCAGTTAGATGCAGAAGGGAA  50
      ||||||| ||||  ||||||||  || |||||| |||||||||| |    
seq2  AGACAACGGTTC--TCAACATGGTGT-CAGCAG-TAGATGCAGAGG----  42

seq1  AGGAAGGAGATCTTTAGTGTGATGCCTGGCTCGTTATTTAACAGTTTGCA  100
      | ||||||  ||||||||||||||||||||||| |||| ||||| |||| 
seq2  ATGAAGGAATTCTTTAGTGTGATGCCTGGCTCG-TATTAAACAGGTTGCC  91

seq1  CCTAGTGAATCACACGTTTTGTTTTGAGGTTTTCCGGTCTCGCTGAGTTT  150
       ||||||| |||| |  |||| |||||||||| ||| |||||||||| ||
seq2  ACTAGTGATTCACCCCGTTTG-TTTGAGGTTTCCCGTTCTCGCTGAG-TT  139

seq1  TCCTCTGGGCAGGCCAAGCACGCATAACAAATAGTTTTCCATCTAATTAC  200
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCCTCTGGGCAGGCCAAGCACGCATAACAAATAG-TTTCCATCTAATTAC  188

seq1  AGAAGGCAGTGCATGTTGCCTGAGCAGCAGGCTCCTCACTTGTGTGGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCAGTGCATGTTGCCTGAGCAGCAGGCTCCTCACTTGTGTGGTAA  238

seq1  CAATCAGCAGGAGCGTGGACTTCAAGGCTTTTATTTTCTCCTCTGCTCTC  300
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAATCAGCAGGAGCGTGGACTTCAAGGCTTTTA-TTTCTCCTCTGCTCTC  287

seq1  ATTTTCCATGGCTGCTCCTTGTTTGGTTTTAGGTTATTTGATGCCAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCATGGCTGCTCCTTGTTTGGTTTTAGGTTATTTGATGCCAGGAA  337

seq1  CCAGCTCTAGATGTATCATATTTTCCATCCATCCATCAATACCAGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCTAGATGTATCATATTTTCCATCCATCCATCAATACCAGAGAAA  387

seq1  TATCCCGTGCGCAGACACAGACGGGGAAGGTCTCTTGCCTTCCCTTACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCGTGCGCAGACACAGACGGGGAAGGTCTCTTGCCTTCCCTTACAA  437

seq1  GAGAAGCCAGTGTTTAGACTTGGAATCCATTCTGGACTAACAAAAGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCCAGTGTTTAGACTTGGAATCCATTCTGGACTAACAAAAGAACA  487

seq1  AGAAAGTGTGTGTTCTCCATTAGACACAACAAAGGCCTGGCTATAGACGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTGTGTGTTCTCCATTAGACACAACAAAGGCCTGGCTATAGACGC  537

seq1  AACTTAATCAGCCTCAATAAACGGGCATTGTGGTGTCTGCTGTGTGTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAATCAGCCTCAATAAACGGGCATTGTGGTGTCTGCTGTGTGTAGT  587

seq1  ATGATCTAGAAAGTGTTTCTTAAAGTCTTTCTCAGAAGGGAAGTCTCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTAGAAAGTGTTTCTTAAAGTCTTTCTCAGAAGGGAAGTCTCTGG  637

seq1  AGATATCCAAGAGAAAAGACTCTAGAGTATGCAAAGTCTGCCAAGCGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCCAAGAGAAAAGACTCTAGAGTATGCAAAGTCTGCCAAGCGTTC  687

seq1  TGTTCCGGAGCTCTCTGATGCAGGGCCACAGTGGACTATGGCACCGCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCGGAGCTCTCTGATGCAGGGCCACAGTGGACTATGGCACCGCACT  737

seq1  GCTCTGATGACCCCAGCGGCTGAAAGCAAAGCTAGGGAAACATTACCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGATGACCCCAGCGGCTGAAAGCAAAGCTAGGGAAACATTACCAGA  787

seq1  GTTGTGCAACCCAGGATGTCAAATTCTATTTGACCACAGACTCTTTGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGCAACCCAGGATGTCAAATTCTATTTGACCACAGACTCTTTGTTT  837

seq1  TAGTTACCCCATCAAGATCTGAGGCAGCAAAGTATAACTAGTAGTCTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACCCCATCAAGATCTGAGGCAGCAAAGTATAACTAGTAGTCTGTG  887

seq1  AGTTATAGTCTGGGACTAGATCAGTCACTGCCTCTGATCAAAAGACAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAGTCTGGGACTAGATCAGTCACTGCCTCTGATCAAAAGACAAAG  937

seq1  TTCAATCTGACATTTGCCACTAATCCATTGGCATCATAGACACTATCGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCTGACATTTGCCACTAATCCATTGGCATCATAGACACTATCGTA  987

seq1  CTAGGCTATACCCAACCACTTATCAGTAACCTTCAAACAATGATAGCAGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTATACCCAACCACTTATCAGTAACCTTCAAACAATGATAGCAGT  1037

seq1  AAATTGCAAATAAGCAAGCCTAGTTAGTAACCCTCTATGTCAGGCACTGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCAAATAAGCAAGCCTAGTTAGTAACCCTCTATGTCAGGCACTGG  1087

seq1  AGTGGAGCTTTATATAGTCTGTCTAATTGATGCCCTTAAACTTGTGATTA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGCTTTATATAGTCTGTCTAATTGATGCCCTTAAACTTGTGATTA  1137

seq1  TTTTTAAATGAATTC  1165
      |||||||||||||||
seq2  TTTTTAAATGAATTC  1152

seq1: chr14_77133556_77134524
seq2: B6Ng01-166A05.g_67_1033

seq1  GAATTCACAGCTTGCTCTGCTCCTAGTACTAGAACCGTGAGATGGGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCTTGCTCTGCTCCTAGTACTAGAACCGTGAGATGGGCAGG  50

seq1  GATTCCCTCATCCCAGGGGATTAGTGACCCCCAAAGGACAAGTGACCGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCTCATCCCAGGGGATTAGTGACCCCCAAAGGACAAGTGACCGAA  100

seq1  GTAGAGAGAAGCGGCTGCAGAAGGGTTATGTGAAAGGAGATTGGGAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGAGAAGCGGCTGCAGAAGGGTTATGTGAAAGGAGATTGGGAGCCC  150

seq1  ACGAAGACCATGCTGGCCTTGAGAGGAAAGAAAAACTGAAGCATAGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAGACCATGCTGGCCTTGAGAGGAAAGAAAAACTGAAGCATAGATGT  200

seq1  TGGTTTCATAAGAGACCCGTTGGATGGTGGCTATTCATGTCCAAGAGCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCATAAGAGACCCGTTGGATGGTGGCTATTCATGTCCAAGAGCGA  250

seq1  CAAACGCAAAAGTTGGGCCTGGGTGGGAGAGTACACAAGATGTGGTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGCAAAAGTTGGGCCTGGGTGGGAGAGTACACAAGATGTGGTTAAA  300

seq1  CACATCACTAAGGTTCCTTTAAAGCCACTTACTGGATGGACGATGTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCACTAAGGTTCCTTTAAAGCCACTTACTGGATGGACGATGTGTCT  350

seq1  GGCAGGATGGAAGGAAGCTGGGGGATTCAGCAACTGCTCTGTTTTTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGATGGAAGGAAGCTGGGGGATTCAGCAACTGCTCTGTTTTTCCTG  400

seq1  GGAGTATACTTTATGTAGCCTGCCAACTAACAAATCCTTATAGAGCCACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTATACTTTATGTAGCCTGCCAACTAACAAATCCTTATAGAGCCACG  450

seq1  ACTAAGTGTGGGCACTGGGCATCCAAACTCCAGCCCTCATGTCTGCATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTGTGGGCACTGGGCATCCAAACTCCAGCCCTCATGTCTGCATGG  500

seq1  CAAGCCTTTTCCCAGCCATATGTGAACATTCCCCAGGCATGCTCAGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTTTTCCCAGCCATATGTGAACATTCCCCAGGCATGCTCAGCTTT  550

seq1  AGACACAAATGAGACGGACAGCACAAGACCAGGCTCTGTTTCCTCAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAAATGAGACGGACAGCACAAGACCAGGCTCTGTTTCCTCAGCTC  600

seq1  TGTCCCCCACCCACAGGGCTTTAGTCCTTTTTTAGTCACCTGGGCCGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCCACCCACAGGGCTTTAGTCCTTTTTTAGTCACCTGGGCCGTGC  650

seq1  TCCTATATCTGAGAATTCCTAGGCTGCATCCCCTCAAGTTCTGTGGCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATATCTGAGAATTCCTAGGCTGCATCCCCTCAAGTTCTGTGGCCAG  700

seq1  TTTAACTGTTCAGCTGTGGGTCACAGCACCGATGTCAGCCGTCTGTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTGTTCAGCTGTGGGTCACAGCACCGATGTCAGCCGTCTGTTCTC  750

seq1  TTAGGGTCCCACAGAGGTGGTCAGATGAGAATCTACTTACTAATAAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTCCCACAGAGGTGGTCAGATGAGAATCTACTTACTAATAAATCA  800

seq1  AGTTGTAAGCAACAGAACAGTTCCTTCTTTAGATCACACACCAACCACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAAGCAACAGAACAGTTCCTTCTTTAGATCACACACCAACCACAA  850

seq1  AATTGCATAGAGATGAGGCTGTGACGACTCCACCCTGCCCTGTCTTTGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCATAGAGATGAGGCTGTGACGACTCCACCCTGCCCTGTCTTTGCT  900

seq1  TTTAGAGTATCATCTCCTGGAGAATACAGTCTTAGGGAGTGTGTGTGTGT  950
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  TTTAGAGTATCATCTCCTGGAG-ATACAGTCTTA-GGAGTGTGTGTGTGT  948

seq1  GTGTGTGTGTGTGTGTGTG  969
      ||||||||||||||||| |
seq2  GTGTGTGTGTGTGTGTGAG  967