BAC Information

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BAC

Clone NameB6Ng01-168I19
Chromosome14 (Build37)X (Build37)
Map Location 90,187,521 - 90,187,77956,484,209 - 56,485,287
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG328451, LOC100043336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168I19.bB6Ng01-168I19.g
ACCDH959759DH959760
length9771,075
definitionDH959759|Mus musculus domesticus DNA, BAC clone: B6Ng01-168I19, 5' end.DH959760|Mus musculus domesticus DNA, BAC clone: B6Ng01-168I19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(90,187,521 - 90,187,779)(56,484,209 - 56,485,287)
sequence
gaattctatcagaccttcaaagatggcctaatgccaatactcttcaaact
attccataaaacaaaaacagaaggaacactacccaatccgtactatgaag
ccacaattatgtttatacctaaaccacacaaagtccaaacatagaaagag
aacttcagaccaatttcccttatgaacatctatgcaaaaatactcaatga
aattcttgcaaaccaaatccaagaacacaacaaaatgatcattaaccatg
atcaactaggctttattccaggaatgcagggatggttcagtatacagaaa
tccatcagttgaatccactacataaacaaacctaaaggaaaaaaaaaaaa
cacatgatcatttcattatatgttgtcaaagcatacatcggaattcaaca
tcccttcatgttaaaagtcttggaaagaacaggaattcaaggcccatacc
taaacatagtaaaagcaatatacagcaaaccagtagccaacatcaaagta
aatggagagaaacttaaagcaatatcactaaaatcagggactagacaagg
ctacccattctctccctatctattgatatagtacttgaagttctagacaa
caaaaagaggtcaaagggatacaaattagaaaggaaaaagtcaaaatatc
actattttcagatgaacttgcttctttctttttttatgcttagtcatttt
ttggatattttatttatttacatttcaaatcttatcccctttcccagacc
ccccggaaacccctataccatgccccctcctcctgcttctatgagagtaa
acccccacccactcccacatctctacccatgcaatcccctacactgggca
tctagccttcacaggaccaagggcatcttctcccattgatacctgagaag
accatcctctgctacatatatggctagagctatgggttcctccatgtata
ttctttggttgttggtttagacactgg
gaattcactgcagctttaaaagagtgtgctcaccatcattgcaccatgta
ctagggaagggttcatgaagctccacactccactgagggattataggcag
atcaagtgtactggaggcagaagtattactttcttcaatgtacctgctga
gaagcagtccatgttctataaactaagccccacataatgcatacaaacaa
ctgtcattaaactcaatgagcacttgttgagaaaacaaattcagtaggag
agggacagggagaggggagagaaatggtgcaatgaaaatagcaaagatca
ctatatatatatatatatatatatatatatatatatatatatatatatat
atgactttctcaacagaaacttaaaaataaaagactcattcagacctaag
tcagtatagttcttcataagaaaaaaaatctccttcatcattttttggtg
ttttccatcaatactctctaccctttttgatccacatcataaagttaagc
aaacagaggaagtgattctgtattgcaaacaattctgcattccttctatt
tcactatcttatgaacacactgctaaagataaattctgaggcaccttcat
ggtatcatggacagtggaagaccttagcagcaacttatgtgtttgagtgg
atttttacagctcataataaaataaaagaatgcagaattgaccatcaaaa
gagtactttctttttaatccaatgtagtaacctgcaagaaaatcccatgt
ggaggctgattgtcttggtaaagtaatgaatctattgttcatcctgcatt
ttaaatttccattaaggaataaaagcactcaagagatagatcttattgtg
tgacatattctctgaatgtcacttagtactaagacaaacatacccttaac
accaatgtaaaactcagtgttttccaattctgagatgaaagaaatactaa
tgcagccattaagagggaacagattctacggattgctatactcctgtctg
ctctttaaagtggcatttatgtggcctaattgggaaacctgtgtccgtta
tttttgaatagtcaggaaacgtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90187521_90187779
seq2: B6Ng01-168I19.b_714_961

seq1  TTCTTTCTTTTTTTATTTTT----ATTTTTTGCTATTTTTTTATTTATTT  46
      ||||||||||||||||  ||    ||||||||    | ||||||||||||
seq2  TTCTTTCTTTTTTTATGCTTAGTCATTTTTTG--GATATTTTATTTATTT  48

seq1  ACATTTCAAATGTTATCCTCTTTCCCAGTTTCCCCTCCACAATAACCCTA  96
      ||||||||||| |||||| |||||||||    ||| ||  || | |||||
seq2  ACATTTCAAATCTTATCCCCTTTCCCAG---ACCCCCCGGAA-ACCCCTA  94

seq1  TCCCCTCATTTCCCCACTTGTCTCTATGAGGGTGTTTGCCCACACACACA  146
      | || |     | || | ||  |||||||  | ||   ||| ||| ||| 
seq2  TACCATGCCCCCTCCTCCTGCTTCTATGA--GAGTAAACCCCCACCCACT  142

seq1  CCCACATATGCCTCAGCAGCATAGCATTCCCCTATCCTGGGTCATCAAGC  196
      |||||||    |||  |  ||| ||| |||||||  ||||| |||| |||
seq2  CCCACAT----CTCTAC-CCAT-GCAATCCCCTACACTGGG-CATCTAGC  185

seq1  CTACACAGAATCAAGGGGCTCCCTACTCAGTGATCCCAAATAAGTCTATC  246
      || ||||| | ||||||  ||    | || |||| ||  | ||| | |||
seq2  CTTCACAGGACCAAGGGCATCTTCTCCCATTGATACCTGAGAAGACCATC  235

seq1  CTCTGCTACATAT  259
      |||||||||||||
seq2  CTCTGCTACATAT  248

seq1: chrX_56484209_56485287
seq2: B6Ng01-168I19.g_67_1141

seq1  GAATTCACTGCAGCTTTAAAAGAGTGTGCTCACCATCATTGCACCATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCAGCTTTAAAAGAGTGTGCTCACCATCATTGCACCATGTA  50

seq1  CTAGGGAAGGGTTCATGAAGCTCCACACTCCACTGAGGGATTATAGGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGAAGGGTTCATGAAGCTCCACACTCCACTGAGGGATTATAGGCAG  100

seq1  ATCAAGTGTACTGGAGGCAGAAGTATTACTTTCTTCAATGTACCTGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTGTACTGGAGGCAGAAGTATTACTTTCTTCAATGTACCTGCTGA  150

seq1  GAAGCAGTCCATGTTCTATAAACTAAGCCCCACATAATGCATACAAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGTCCATGTTCTATAAACTAAGCCCCACATAATGCATACAAACAA  200

seq1  CTGTCATTAAACTCAATGAGCACTTGTTGAGAAAACAAATTCAGTAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATTAAACTCAATGAGCACTTGTTGAGAAAACAAATTCAGTAGGAG  250

seq1  AGGGACAGGGAGAGGGGAGAGAAATGGTGCAATGAAAATAGCAAAGATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGGGAGAGGGGAGAGAAATGGTGCAATGAAAATAGCAAAGATCA  300

seq1  CTATATATATATATATATATATATATATATATATATATATATATATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATATATATATATATATATATATATATATATATATATATATATATAT  350

seq1  ATGACTTTCTCAACAGAAACTTAAAAATAAAAGACTCATTCAGACCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTTCTCAACAGAAACTTAAAAATAAAAGACTCATTCAGACCTAAG  400

seq1  TCAGTATAGTTCTTCATAAGAAAAAAAATCTCCTTCATCATTTTTTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATAGTTCTTCATAAGAAAAAAAATCTCCTTCATCATTTTTTGGTG  450

seq1  TTTTCCATCAATACTCTCTACCCTTTTTGATCCACATCATAAAGTTAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATCAATACTCTCTACCCTTTTTGATCCACATCATAAAGTTAAGC  500

seq1  AAACAGAGGAAGTGATTCTGTATTGCAAACAATTCTGCATTCCTTCTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGGAAGTGATTCTGTATTGCAAACAATTCTGCATTCCTTCTATT  550

seq1  TCACTATCTTATGAACACACTGCTAAAGATAAATTCTGAGGCACCTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATCTTATGAACACACTGCTAAAGATAAATTCTGAGGCACCTTCAT  600

seq1  GGTATCATGGACAGTGGAAGACCTTAGCAGCAACTTATGTGTTTGAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCATGGACAGTGGAAGACCTTAGCAGCAACTTATGTGTTTGAGTGG  650

seq1  ATTTTTACAGCTCATAATAAAATAAAAGAATGCAGAATTGACCATCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTACAGCTCATAATAAAATAAAAGAATGCAGAATTGACCATCAAAA  700

seq1  GAGTACTTTCTTTTTAATCCAATGTAGTAACCTGCAAGAAAATCCCATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTTTCTTTTTAATCCAATGTAGTAACCTGCAAGAAAATCCCATGT  750

seq1  GGAGGCTGATTGTCTTGGTAAAGTAATGAATCTATTGTTCATCCTGCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTGATTGTCTTGGTAAAGTAATGAATCTATTGTTCATCCTGCATT  800

seq1  TTAAATTTCCATTAAGGAATAAAAGCACTCAAGAGATAGATCTTATTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTCCATTAAGGAATAAAAGCACTCAAGAGATAGATCTTATTGTG  850

seq1  TGACATATTCTCTGAATGTCACTTAGTACTAAGACAAACATACCCTTAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATATTCTCTGAATGTCACTTAGTACTAAGACAAACATACCCTTAAC  900

seq1  ACCAATGTAAAAACTCAGTGTTTTCCAATTCTGAGATGAAAGAAATACTA  950
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGT-AAAACTCAGTGTTTTCCAATTCTGAGATGAAAGAAATACTA  949

seq1  ATGCAGCCATTAAGAGGGAACAGAATTCTACGGATTTGCTATACTCCTGT  1000
      ||||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  ATGCAGCCATTAAGAGGGAACAG-ATTCTACGGA-TTGCTATACTCCTGT  997

seq1  CTGCTCTCTAAAGTGGCA-TCATGTGGTCTTAATTGGGAAACTTGTGTCA  1049
      ||||||| |||||||||| | |||||| | |||||||||||| |||||| 
seq2  CTGCTCTTTAAAGTGGCATTTATGTGG-CCTAATTGGGAAACCTGTGTCC  1046

seq1  GTTATTTTTGATAAGTCAGGAAAACGTAGG  1079
      |||||||||||  ||||||| |||||||||
seq2  GTTATTTTTGAATAGTCAGG-AAACGTAGG  1075