BAC Information

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BAC

Clone NameB6Ng01-169M06
Chromosome14 (Build37)
Map Location 95,892,731 - 96,021,052
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043783, LOC677613, LOC100043784, LOC382931
Downstream gene4921530L21Rik, Klhl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169M06.bB6Ng01-169M06.g
ACCDH960653DH960654
length1,1861,046
definitionDH960653|Mus musculus domesticus DNA, BAC clone: B6Ng01-169M06, 5' end.DH960654|Mus musculus domesticus DNA, BAC clone: B6Ng01-169M06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,892,731 - 95,893,923)(96,019,999 - 96,021,052)
sequence
gaattctttctcagatggatttatagccatttacgtgtctcctaccatgt
ttaacagattatgcattctaactcgaatgcctatgtttgggtcttttgtt
ttatttagatttttcccacattattttgtgtttatattactgccaacaac
tgtgaattactttgaggaaagaacgtggtgatcgtctctcctcctatgct
tccatgtgtttatgacattggccggtaattaggtgaatagccatggaatt
aattaaattctctttagcccatttaaaaaattctacaagagatgggcaaa
atattcagagcatagcatgtcctcagaatgttcataatgtcgactcttag
aacacagcagaaaagaattcatctctcatctatatgttgtaaaatttaaa
ttatgaatgcttaccttgtaatagggataacctgatgttgtcatagagtc
cctgaaatataaatttacacttttaattttaaaatatcaggacataataa
ccagaaattaaactaacatcacacatgagggattttatttaatacatttc
ttttaaatttacatatctgagatgtcttaaatggtggctccatatttcct
acttatttctgttagtaattccaagggcttgtcaagttccctccactccc
ctgaggattcatgtcatggattactatttacatttctattaatcatgcct
tccattcggtttgcatgcaacaaacttaaaacacactcaaaaatctgccc
tacttactagaatgctgttgaattcctacacgtctcatagttttgcactg
atacacacaaagcttcaaagctggtctaggtcaatttattaaaaaatgaa
cagagatcaactcacttgtgtgtctgactgtcaaacagcctgcacatgac
tcagtaagacaggtcaatcttcctggatattcatttgcccttgagccctt
tctcttcatctgtcagtcttttctcatggaaataagtcccattcattttt
aattagtgatattgcttcgctcactgacgtcgtctaacactttgtctgac
tacatagtagctcagagaccctctgtattcagttatatttttttaaatct
tcaagcattgtccagggaataaaaagatactacgttctcaatgtccagct
ctattccaattttctgtgcagcaactaaagtgaatt
gaattcctgtaaaacctgagcacaagcatcacacgtgcccacacatcaaa
cacacacacaagctcacacacagagtgaaacaacataaaatatactttgg
gagaatataattaccaaaccttctattacatggtacatcaattctacaga
gatatttgtctctgttaaatacagcatttctaaatttacatttcttagta
ttgctcttattcaactaattttaagaaatgaataaaatgattttctccta
cctacctttcttctaagaaatgtgtgtaattattttaggtttacttaaaa
tatcttacctgataaatactaaactattatagtataatcctgctgtaatt
tgggttttgtaatcagggttttgttttttcctttctttatcctacttaac
aaagatttatacactgaatataaaaatagtgttttcaaacttccaattaa
ttattatttattgtattttcaacaatgcagctaatgtagccccgtataga
aaaaatattaatgttataaaaacattcggtgtaaaggagacatcttaggt
tacttatatttagcatacattaaatcttttcttgatctagaaagtctctt
atatatggactgtggattctttcattctctgtatatacagtccatccttc
agttattaatgtgacaaggagaaaaaaatacttgattttgcaaaggctgt
gcgatagttcctctctgtctgactgaatctggtgaagtgtaagccagatt
ttacacctttatcgtggttttaatctgcttggggtcattttgcttcagct
tgggacttttaaaaggaaggtaaaattactcttcatgatgaatgaatgaa
tcagggaattgtttactaatattgaattatatattagtttttaactcaca
ggaacacatacagtaatttattggactattccattaaccatgagtgtgtt
tctactatgtcgtagaacgtatatgtcctgatgactttatttatttcgta
agcagaaaaaaattcaattctggagtacgttcctcagagcatgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_95892731_95893923
seq2: B6Ng01-169M06.b_46_1231

seq1  GAATTCTTTCTCAGATGGATTTATAGCCATTTACGTGTCTCCTACCATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCAGATGGATTTATAGCCATTTACGTGTCTCCTACCATGT  50

seq1  TTAACAGATTATGCATTCTAACTCGAATGCCTATGTTTGGGTCTTTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGATTATGCATTCTAACTCGAATGCCTATGTTTGGGTCTTTTGTT  100

seq1  TTATTTAGATTTTTCCCACATTATTTTGTGTTTATATTACTGCCAACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGATTTTTCCCACATTATTTTGTGTTTATATTACTGCCAACAAC  150

seq1  TGTGAATTACTTTGAGGAAAGAACGTGGTGATCGTCTCTCCTCCTATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATTACTTTGAGGAAAGAACGTGGTGATCGTCTCTCCTCCTATGCT  200

seq1  TCCATGTGTTTATGACATTGGCCGGTAATTAGGTGAATAGCCATGGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTGTTTATGACATTGGCCGGTAATTAGGTGAATAGCCATGGAATT  250

seq1  AATTAAATTCTCTTTAGCCCATTTAAAAAATTCTACAAGAGATGGGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATTCTCTTTAGCCCATTTAAAAAATTCTACAAGAGATGGGCAAA  300

seq1  ATATTCAGAGCATAGCATGTCCTCAGAATGTTCATAATGTCGACTCTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAGAGCATAGCATGTCCTCAGAATGTTCATAATGTCGACTCTTAG  350

seq1  AACACAGCAGAAAAGAATTCATCTCTCATCTATATGTTGTAAAATTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGCAGAAAAGAATTCATCTCTCATCTATATGTTGTAAAATTTAAA  400

seq1  TTATGAATGCTTACCTTGTAATAGGGATAACCTGATGTTGTCATAGAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAATGCTTACCTTGTAATAGGGATAACCTGATGTTGTCATAGAGTC  450

seq1  CCTGAAATATAAATTTACACTTTTAATTTTAAAATATCAGGACATAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAATATAAATTTACACTTTTAATTTTAAAATATCAGGACATAATAA  500

seq1  CCAGAAATTAAACTAACATCACACATGAGGGATTTTATTTAATACATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATTAAACTAACATCACACATGAGGGATTTTATTTAATACATTTC  550

seq1  TTTTAAATTTACATATCTGAGATGTCTTAAATGGTGGCTCCATATTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTTACATATCTGAGATGTCTTAAATGGTGGCTCCATATTTCCT  600

seq1  ACTTATTTCTGTTAGTAATTCCAAGGGCTTGTCAAGTTCCCTCCACTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTCTGTTAGTAATTCCAAGGGCTTGTCAAGTTCCCTCCACTCCC  650

seq1  CTGAGGATTCATGTCATGGATTACTATTTACATTTCTATTAATCATGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGATTCATGTCATGGATTACTATTTACATTTCTATTAATCATGCCT  700

seq1  TCCATTCGGTTTGCATGCAACAAACTTAAAACACACTCAAAAATCTGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCGGTTTGCATGCAACAAACTTAAAACACACTCAAAAATCTGCCC  750

seq1  TACTTACTAGAATGCTGTTGAATTCCTACACGTCTCATAGTTTTGCACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACTAGAATGCTGTTGAATTCCTACACGTCTCATAGTTTTGCACTG  800

seq1  ATACACACAAAGCTTCAAAGCTGGTCTAGGTCAATTTATTAAAAAATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACAAAGCTTCAAAGCTGGTCTAGGTCAATTTATTAAAAAATGAA  850

seq1  CAGAGATCAACTCACTTGTGTGTCTGACTGTCAAACAGCCTGCACATGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCAACTCACTTGTGTGTCTGACTGTCAAACAGCCTGCACATGAC  900

seq1  TCAGTAAGACAGGTCAATCTTCCTGGATATTCATTTGCCCTTGAGCCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAGACAGGTCAATCTTCCTGGATATTCATTTGCCCTTGAGCCCTT  950

seq1  TCTCTTCATCTGTCAGTCTTTTCTCAATGGAAATAAGTCCCATTCATTTT  1000
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTCTTCATCTGTCAGTCTTTTCTC-ATGGAAATAAGTCCCATTCATTTT  999

seq1  TAATTAGTTGATATTGCTTCGCTCACTGACGGTCGTCTAACACTTTGTCT  1050
      ||||||| |||||||||||||||||||||| |||||||||||||||||||
seq2  TAATTAG-TGATATTGCTTCGCTCACTGAC-GTCGTCTAACACTTTGTCT  1047

seq1  GACTACATAGTAGGCTCAGGAGACCCTTCTGTATTCAG-TATA-TTTTTT  1098
      |||||||||||| ||||| ||||||| ||||||||||| |||| ||||||
seq2  GACTACATAGTA-GCTCA-GAGACCC-TCTGTATTCAGTTATATTTTTTT  1094

seq1  AAATCTTTCAAAGCATTGTCCAGGGGGATAAAAAGTACCTACGTTCTCCA  1148
      |||||||   |||||||||||| ||| ||||||||   |||||||||| |
seq2  AAATCTT--CAAGCATTGTCCA-GGGAATAAAAAGATACTACGTTCTCAA  1141

seq1  TGGTCCAGCTC-ATTCCATATTTCTGTGCAGCAACTAAAGTGAATT  1193
      | ||||||||| ||||||  ||||||||||||||||||||||||||
seq2  T-GTCCAGCTCTATTCCAATTTTCTGTGCAGCAACTAAAGTGAATT  1186

seq1: chr14_96019999_96021052
seq2: B6Ng01-169M06.g_68_1113 (reverse)

seq1  TTACATGCTCTGAGGGAACGTACTCCAGAATTGGAATTTTTTTTCTGCTT  50
      ||||||||||||| |||||||||||||||||||  | |||||||||||||
seq2  TTACATGCTCTGA-GGAACGTACTCCAGAATTG--AATTTTTTTCTGCTT  47

seq1  ACGAAATAAATAAAGTTCAATCAGGACAATATTACGTTTCTACGACATAG  100
      ||||||||||||||||   |||||||| ||| |||| |||||||||||||
seq2  ACGAAATAAATAAAGT--CATCAGGAC-ATA-TACG-TTCTACGACATAG  92

seq1  TAGAAACACACTCATGGTTAATGGAATAGTCCAATAAATTACTGTATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACACACTCATGGTTAATGGAATAGTCCAATAAATTACTGTATGTG  142

seq1  TTCCTGTGAGTTAAAAACTAATATATAATTCAATATTAGTAAACAATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTGAGTTAAAAACTAATATATAATTCAATATTAGTAAACAATTCC  192

seq1  CTGATTCATTCATTCATCATGAAGAGTAATTTTACCTTCCTTTTAAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCATTCATTCATCATGAAGAGTAATTTTACCTTCCTTTTAAAAGT  242

seq1  CCCAAGCTGAAGCAAAATGACCCCAAGCAGATTAAAACCACGATAAAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGCTGAAGCAAAATGACCCCAAGCAGATTAAAACCACGATAAAGGT  292

seq1  GTAAAATCTGGCTTACACTTCACCAGATTCAGTCAGACAGAGAGGAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATCTGGCTTACACTTCACCAGATTCAGTCAGACAGAGAGGAACTA  342

seq1  TCGCACAGCCTTTGCAAAATCAAGTATTTTTTTCTCCTTGTCACATTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCACAGCCTTTGCAAAATCAAGTATTTTTTTCTCCTTGTCACATTAAT  392

seq1  AACTGAAGGATGGACTGTATATACAGAGAATGAAAGAATCCACAGTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGGATGGACTGTATATACAGAGAATGAAAGAATCCACAGTCCAT  442

seq1  ATATAAGAGACTTTCTAGATCAAGAAAAGATTTAATGTATGCTAAATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGAGACTTTCTAGATCAAGAAAAGATTTAATGTATGCTAAATATA  492

seq1  AGTAACCTAAGATGTCTCCTTTACACCGAATGTTTTTATAACATTAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACCTAAGATGTCTCCTTTACACCGAATGTTTTTATAACATTAATAT  542

seq1  TTTTTCTATACGGGGCTACATTAGCTGCATTGTTGAAAATACAATAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTATACGGGGCTACATTAGCTGCATTGTTGAAAATACAATAAATA  592

seq1  ATAATTAATTGGAAGTTTGAAAACACTATTTTTATATTCAGTGTATAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAATTGGAAGTTTGAAAACACTATTTTTATATTCAGTGTATAAAT  642

seq1  CTTTGTTAAGTAGGATAAAGAAAGGAAAAAACAAAACCCTGATTACAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTAAGTAGGATAAAGAAAGGAAAAAACAAAACCCTGATTACAAAA  692

seq1  CCCAAATTACAGCAGGATTATACTATAATAGTTTAGTATTTATCAGGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATTACAGCAGGATTATACTATAATAGTTTAGTATTTATCAGGTAA  742

seq1  GATATTTTAAGTAAACCTAAAATAATTACACACATTTCTTAGAAGAAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTAAGTAAACCTAAAATAATTACACACATTTCTTAGAAGAAAGG  792

seq1  TAGGTAGGAGAAAATCATTTTATTCATTTCTTAAAATTAGTTGAATAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAGGAGAAAATCATTTTATTCATTTCTTAAAATTAGTTGAATAAGA  842

seq1  GCAATACTAAGAAATGTAAATTTAGAAATGCTGTATTTAACAGAGACAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATACTAAGAAATGTAAATTTAGAAATGCTGTATTTAACAGAGACAAA  892

seq1  TATCTCTGTAGAATTGATGTACCATGTAATAGAAGGTTTGGTAATTATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTGTAGAATTGATGTACCATGTAATAGAAGGTTTGGTAATTATAT  942

seq1  TCTCCCAAAGTATATTTTATGTTGTTTCACTCTGTGTGTGAGCTTGTGTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAAAGTATATTTTATGTTGTTTCACTCTGTGTGTGAGCTTGTGTG  992

seq1  TGTGTTTGATGTGTGGGCACGTGTGATGCTTGTGCTCAGGTTTTACAGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGATGTGTGGGCACGTGTGATGCTTGTGCTCAGGTTTTACAGGA  1042

seq1  ATTC  1054
      ||||
seq2  ATTC  1046