BAC Information

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BAC

Clone NameB6Ng01-171E14
Chromosome14 (Build37)
Map Location 83,089,620 - 83,157,938
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773, LOC100043279
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171E14.bB6Ng01-171E14.g
ACCGA000213GA000214
length9851,107
definitionB6Ng01-171E14.b B6Ng01-171E14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,157,396 - 83,157,938)(83,089,620 - 83,090,725)
sequence
gaattcaaaacgctatatgctaaatacaaatctaaacattttctttccag
tgtgcctctaaaacatatggagaaaaatgctgaatgatgaccaatggaac
tggtaattacagatttcggtgttaaaaaaaaaaaaaaagttgagatgcta
tttatttattcagacactaccacactttttcatacctaacctagacaata
taaactgccacggcactccggtcgagttagcctgtcaggcagggatgcct
aaaagctgctcatgaagcaaaaagagtttcacagaactcgctcctggagt
ctggtgtgctctctaaattttccattcccgagttagtctagtggatggat
ccatgtgctctctttattataagtgccttttaagattgaattctgacata
gctaaagccttccgccagtgttccaacagtcctaggacatccttgagcta
gacagtgacattcagaatagcttctggtattacactatcaataaaagcca
agtcgctcccatatacaggaatttacaatagtataggaaatagatcgggc
tgtggttttagagtattgcattattcattaaatggttagctagaatggaa
ctccctagttagaaccatgacttgggtgtgaaagcccttgccttaggaaa
gtaaagacttcacacctggcttctaagactatagctgagttacacccata
cacacgcatttacaatggcctaaggggaaggtggactatacaatagacta
aaagaggaactatggcaagggcgctaggcttctaagattagtgaatctta
ggtggagcccttgatgatcctagtagttatcaatgaattctatcccaggt
ggttcccattagaccttttgtgtttgcattcctctgttttatgtaagaat
tccggttacctcatttgtaccttacgatatgtcacccaactttcctattg
tcttctgcataaaaggtctgatgcttgatttgaaa

gaattctattcatacaattttgggttaatgctttgcaacttagtgttttc
taaaattgttacaaaggtggggttttattatgttgtttgaagacggcaat
tttatactattttctcttcctattttgccaatttatatgaacgaaatgca
tcctgatataaaaaatatttataactgaactctgttacatgcttttctta
tattttctcaatattaactcaaaaatttttagaaaggcatatttagaaca
acagaccaaatgcattaactaacagtattaagctgccattttatgtgtcg
aataagagcatccatgctcattttctgctgttttggacagaatttctcat
tgttctgccagaaagaatcgaaatgctggtttctgtttaatactttccag
tagtttactttgttaaagagcaaaagtatttccagacattgccacatatc
cttttgggaacaatgttttttcttatctaagcatcattgtgttaagtcta
tatttgcatttaatgtaaattaataaattgaatacatgtaatagtataaa
actgaattatcaatagtcataattccctcatacaaaataatctccattaa
ctttattagaacaaaaattgatgggtaaaagactaatatttttttctccc
tattgtggacaaaaccataaatatataaaatcacacatagttttgacaga
cttgagaaatctaagtacaaaaccataattgtctgtaaaggtcaagtccc
atttttgccaaatgctagtgtctattttaaacattgtatttcatgatgat
acttcacatcatttgaagtcatattccatctgtagcaatgcagtatctaa
atgtcaggtaaaattttccaattcatcacatatttagattatttctggat
atagaaatagcccaattggcatgggaaaaatcacattatttcattgttaa
accaattatgggtcagctggatagcagaaattactaggcttaaggagtga
ttgcatactattttcagctgcttcattacaatctacagagatccagtttc
ttggagtgtaactatcactacctgtgacagcagaaatacctcagagtcat
ttattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83157396_83157938
seq2: B6Ng01-171E14.b_41_583 (reverse)

seq1  TCTATTTCCTATACTATTGTAAATTCCTGTATATGGGAGCGACTTGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCCTATACTATTGTAAATTCCTGTATATGGGAGCGACTTGGCTT  50

seq1  TTATTGATAGTGTAATACCAGAAGCTATTCTGAATGTCACTGTCTAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGATAGTGTAATACCAGAAGCTATTCTGAATGTCACTGTCTAGCTC  100

seq1  AAGGATGTCCTAGGACTGTTGGAACACTGGCGGAAGGCTTTAGCTATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGTCCTAGGACTGTTGGAACACTGGCGGAAGGCTTTAGCTATGTC  150

seq1  AGAATTCAATCTTAAAAGGCACTTATAATAAAGAGAGCACATGGATCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCAATCTTAAAAGGCACTTATAATAAAGAGAGCACATGGATCCAT  200

seq1  CCACTAGACTAACTCGGGAATGGAAAATTTAGAGAGCACACCAGACTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAGACTAACTCGGGAATGGAAAATTTAGAGAGCACACCAGACTCCA  250

seq1  GGAGCGAGTTCTGTGAAACTCTTTTTGCTTCATGAGCAGCTTTTAGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCGAGTTCTGTGAAACTCTTTTTGCTTCATGAGCAGCTTTTAGGCAT  300

seq1  CCCTGCCTGACAGGCTAACTCGACCGGAGTGCCGTGGCAGTTTATATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCTGACAGGCTAACTCGACCGGAGTGCCGTGGCAGTTTATATTGT  350

seq1  CTAGGTTAGGTATGAAAAAGTGTGGTAGTGTCTGAATAAATAAATAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTAGGTATGAAAAAGTGTGGTAGTGTCTGAATAAATAAATAGCAT  400

seq1  CTCAACTTTTTTTTTTTTTTTAACACCGAAATCTGTAATTACCAGTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACTTTTTTTTTTTTTTTAACACCGAAATCTGTAATTACCAGTTCCA  450

seq1  TTGGTCATCATTCAGCATTTTTCTCCATATGTTTTAGAGGCACACTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATCATTCAGCATTTTTCTCCATATGTTTTAGAGGCACACTGGAA  500

seq1  AGAAAATGTTTAGATTTGTATTTAGCATATAGCGTTTTGAATT  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGTTTAGATTTGTATTTAGCATATAGCGTTTTGAATT  543


seq1: chr14_83089620_83090725
seq2: B6Ng01-171E14.g_65_1171

seq1  GAATTCTATTCATACAATTTTGGGTTAATGCTTTGCAACTTAGTGTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCATACAATTTTGGGTTAATGCTTTGCAACTTAGTGTTTTC  50

seq1  TAAAATTGTTACAAAGGTGGGGTTTTATTATGTTGTTTGAAGACGGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGTTACAAAGGTGGGGTTTTATTATGTTGTTTGAAGACGGCAAT  100

seq1  TTTATACTATTTTCTCTTCCTATTTTGCCAATTTATATGAACGAAATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTATTTTCTCTTCCTATTTTGCCAATTTATATGAACGAAATGCA  150

seq1  TCCTGATATAAAAAATATTTATAACTGAACTCTGTTACATGCTTTTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATATAAAAAATATTTATAACTGAACTCTGTTACATGCTTTTCTTA  200

seq1  TATTTTCTCAATATTAACTCAAAAATTTTTAGAAAGGCATATTTAGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTCAATATTAACTCAAAAATTTTTAGAAAGGCATATTTAGAACA  250

seq1  ACAGACCAAATGCATTAACTAACAGTATTAAGCTGCCATTTTATGTGTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCAAATGCATTAACTAACAGTATTAAGCTGCCATTTTATGTGTCG  300

seq1  AATAAGAGCATCCATGCTCATTTTCTGCTGTTTTGGACAGAATTTCTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAGCATCCATGCTCATTTTCTGCTGTTTTGGACAGAATTTCTCAT  350

seq1  TGTTCTGCCAGAAAGAATCGAAATGCTGGTTTCTGTTTAATACTTTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGCCAGAAAGAATCGAAATGCTGGTTTCTGTTTAATACTTTCCAG  400

seq1  TAGTTTACTTTGTTAAAGAGCAAAAGTATTTCCAGACATTGCCACATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTACTTTGTTAAAGAGCAAAAGTATTTCCAGACATTGCCACATATC  450

seq1  CTTTTGGGAACAATGTTTTTTCTTATCTAAGCATCATTGTGTTAAGTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGGAACAATGTTTTTTCTTATCTAAGCATCATTGTGTTAAGTCTA  500

seq1  TATTTGCATTTAATGTAAATTAATAAATTGAATACATGTAATAGTATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCATTTAATGTAAATTAATAAATTGAATACATGTAATAGTATAAA  550

seq1  ACTGAATTATCAATAGTCATAATTCCCTCATACAAAATAATCTCCATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATTATCAATAGTCATAATTCCCTCATACAAAATAATCTCCATTAA  600

seq1  CTTTATTAGAACAAAAATTGATGGGTAAAAGACTAATATTTTTTTCTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTAGAACAAAAATTGATGGGTAAAAGACTAATATTTTTTTCTCCC  650

seq1  TATTGTGGACAAAACCATAAATATATAAAATCACACATAGTTTTGACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGACAAAACCATAAATATATAAAATCACACATAGTTTTGACAGA  700

seq1  CTTGAGAAATCTAAGTACAAAACCATAATTGTCTGTAAAGGTCAAGTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAAATCTAAGTACAAAACCATAATTGTCTGTAAAGGTCAAGTCCC  750

seq1  ATTTTTGCCAAATGCTAGTGTCTATTTTAAACATTGTATTTCATGATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGCCAAATGCTAGTGTCTATTTTAAACATTGTATTTCATGATGAT  800

seq1  ACTTCACATCATTTGAAGTCATATTCCATCTGTAGCAATGCAGTATCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACATCATTTGAAGTCATATTCCATCTGTAGCAATGCAGTATCTAA  850

seq1  ATGTCAGGGTAAAATTTTCCAATTCATCACATATTTAGA-TATTTCTGGA  899
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  ATGTCA-GGTAAAATTTTCCAATTCATCACATATTTAGATTATTTCTGGA  899

seq1  TATAGAAATAG-CCAATTGGCATGGGAAAAATCACATTATTTCATTGTTA  948
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAATAGCCCAATTGGCATGGGAAAAATCACATTATTTCATTGTTA  949

seq1  AACCAA-TAT-GGTCAGCTGGATAGCAGAAATTACTAGGC-TAAGGAGTG  995
      |||||| ||| ||||||||||||||||||||||||||||| |||||||||
seq2  AACCAATTATGGGTCAGCTGGATAGCAGAAATTACTAGGCTTAAGGAGTG  999

seq1  ATTGCATTACTATTTTCAGCTGCTTCATACCAATCCTACAGAGATTCAGT  1045
      |||||| |||||||||||||||||||||  |||| |||||||||| ||||
seq2  ATTGCA-TACTATTTTCAGCTGCTTCATTACAAT-CTACAGAGATCCAGT  1047

seq1  TTCTT-GAGTGTAAACTATCACTA-CTGTGAACCAAGCAG-AATACCTCA  1092
      ||||| |||||| ||||||||||| ||||||    ||||| |||||||||
seq2  TTCTTGGAGTGT-AACTATCACTACCTGTGA---CAGCAGAAATACCTCA  1093

seq1  GAGTCATTTATTCT  1106
      ||||||||||||||
seq2  GAGTCATTTATTCT  1107


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