BAC Information

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BAC

Clone NameB6Ng01-171N18
Chromosome14 (Build37)
Map Location 108,147,301 - 108,148,416
singlet/doubletsinglet
Overlap geneLOC668752, EG668754
Upstream genenone
Downstream geneLOC668757, EG668761
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171N18.bB6Ng01-171N18.g
ACCGA000631GA000632
length1,1131,085
definitionB6Ng01-171N18.b B6Ng01-171N18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcagatcaactttttgggcctcatcatatctgagagaagaag
tgatgaaggacacaatctggctaataagttgattaaggttagtatatgtc
aaggtttctttgacagatgtcaaagattgtctcattttctgctatgaagg
tacaaacagagtgctccagggaggcatgactggtaaggatggaattgtag
tgctcaaccacagctatggaaacctgggggaggggagctgggtaaacgga
gagctacattttggatttctttctgtagtcaacagagagtcgctccatca
gcgggaggtaaacccagacccagttacccagttatagctgtggaaaacca
agaagccttgaagacccatgtgctggtcagcagcttgagaattctgtcca
agacaaggtcaataatctctttgcaatggtgtacagaccacaggcatagt
tattggcagcatcttctttgcttgttatgagctactcagggtggaagaac
tggctgtaggtaccagtatgaatgtcatcaatacgtttgggttgcagatc
tatgaacactgttggggcacatgcttaccagctcctgtctcactgaaggt
gttgaaacagtcagctcctatttcaatgatcttgacacttggtatctggt
catcaagctggatgccatgttccaggcagtagagctcccagcaggcattg
ctgatctggacacaagcctggccaaaatggatggagatgcaatcatgcat
tatatctatgggttatacagctgaggatgacagaagcagaagccaggtcc
cgtttattgttccaacaactaaagagtcaaggtaattaacacaatgaagt
caactgcaacaaatactaatcaaagtctttcaggggacgaagtcacagga
ataaaacttaaagcaacaataaggtgatggagaagaagaaacagctggat
tactgtacattaaagggttgaataaagcttatatgccttagatccttttt
atatgggattagccaacacctaatggaaatctagagttacaaaatctgaa
tgctataagatagatttatataaaacacctgaacatatttccacacaggt
tgaaacaatcttg

gaattcttttcagtttttagctatttccagtaaagatcctatgaatatag
tggagtatgtgtccctgtggtatggtagagcccaagtgcaatacagctgg
gtcattaggcttctatgaacatagtggagcatatgctgctgtggtatggt
ggctcatcttttgggtacataacccaaactaactatacatcttaatcttc
tattacaactgggtctttaggtaaaacaattccaaaatttcctgagaaaa
ctcaaaattgatttccagagtgattaagtttgtactctcacaagcagtgg
aggaatgtcacccttgctccatatcctggtcatcatgtgctgttgcttgg
atttttgacttagccattcagatgggtaaaagatagaatctcaggtgatt
acttttttctgtctctgaaggggaattgaagcattctcactctgtccctt
ctgtttactaatcttcttgagttctgtgtattgtattctaggtattctgt
acttttttggttaatatgctcttagtagtgagtacatgctatgcatttcc
ttttggatctgagttatgtcactcaggatattttctatttccatccattt
gactgcaaaactcatgatatcctcattcttaatagctgaatagtattcca
ttctctaaataagctgcattttttttccatccattcttccattgttggac
atctgggatgtttccagcttctggctatctaagataagtctgtgtgagga
gcgggtgtggcagcagtcccaagatggcgcccgggactgccactaagtct
tatgacttgcacctgacttcctcatacacctgaaaatagccaagaccatc
atgagagctgcgcaggtgccaccatgatgctggcggtataaacagtccat
atttggttgagaacatgccttctgccgccctgattgcctgaagcctgcat
gcctggtgaagtgacatgccctgccatgagtggatggggggctgagagta
tataagcagactccttgggtaccggaatccgtagcagcataatgtgttcc
tgcattaaagctgttagaagaaattcctgaccggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_108147301_108148416
seq2: B6Ng01-171N18.b_52_1164 (reverse)

seq1  CAAGATTTGTTTTCAAACACTGTGTGAATATGTTTTCAGTTGTTTTTTAT  50
      |||||||   ||||||   ||||||| | || | ||||| |||||| |||
seq2  CAAGATT--GTTTCAA--CCTGTGTGGAAATATGTTCAGGTGTTTTATAT  46

seq1  ATAAAATCTATC-TATAGCACTCAGATTTTTTGTAACTCTAGATTT-CAT  98
         ||||||||| ||||||| |||||  |||||||||||||||||| |||
seq2  ---AAATCTATCTTATAGCATTCAGA--TTTTGTAACTCTAGATTTCCAT  91

seq1  TAAGTTGTTGCTAAT-CCATAT-AAAAGGATCTAAGACATATTAAAGCTT  146
      || ||  | |||||| |||||| ||||||||||||| |||||  ||||||
seq2  TAGGTGTTGGCTAATCCCATATAAAAAGGATCTAAGGCATAT--AAGCTT  139

seq1  TA-TCAACCCTTTAATGTACAGTAAT-CAGCTGTTTC-TCTTCTCCATCA  193
      || ||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  TATTCAACCCTTTAATGTACAGTAATCCAGCTGTTTCTTCTTCTCCATCA  189

seq1  CCTTATTGTTGCTTTAAGTTTTATTCCTGTGAC-TCGTCCCCTGAAAGAA  242
      ||||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  CCTTATTGTTGCTTTAAGTTTTATTCCTGTGACTTCGTCCCCTGAAAG-A  238

seq1  CTTTGATTAGTATTTGTTGCAGTTGACTTCATTGTGTTAATTACCTTGAC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATTAGTATTTGTTGCAGTTGACTTCATTGTGTTAATTACCTTGAC  288

seq1  TC-TTAGTTGTTGGAACAATAAACGGGACCTGGCTTCTGCTTCTGTCATC  341
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGTTGTTGGAACAATAAACGGGACCTGGCTTCTGCTTCTGTCATC  338

seq1  CTCAGCTGTATAACCCATAGATATAATGCATGATTGCATCTCCATCCATT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGTATAACCCATAGATATAATGCATGATTGCATCTCCATCCATT  388

seq1  TTGGCCAGGCTTGTGTCCAGATCAGCAATGCCTGCTGGGAGCTCTACTGC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCAGGCTTGTGTCCAGATCAGCAATGCCTGCTGGGAGCTCTACTGC  438

seq1  CTGGAACATGGCATCCAGCTTGATGACCAGATACCAAGTGTCAAGATCAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACATGGCATCCAGCTTGATGACCAGATACCAAGTGTCAAGATCAT  488

seq1  TGAAATAGGAGCTGACTGTTTCAACACCTTCAGTGAGACAGGAGCTGGTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAGGAGCTGACTGTTTCAACACCTTCAGTGAGACAGGAGCTGGTA  538

seq1  AGCATGTGCCCCAACAGTGTTCATAGATCTGCAACCCAAACGTATTGATG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTGCCCCAACAGTGTTCATAGATCTGCAACCCAAACGTATTGATG  588

seq1  ACATTCATACTGGTACCTACAGCCAGTTCTTCCACCCTGAGTAGCTCATA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATACTGGTACCTACAGCCAGTTCTTCCACCCTGAGTAGCTCATA  638

seq1  ACAAGCAAAGAAGATGCTGCCAATAACTATGCCTGTGGTCTGTACACCAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAAAGAAGATGCTGCCAATAACTATGCCTGTGGTCTGTACACCAT  688

seq1  TGCAAAGAGATTATTGACCTTGTCTTGGACAGAATTCTCAAGCTGCTGAC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGAGATTATTGACCTTGTCTTGGACAGAATTCTCAAGCTGCTGAC  738

seq1  CAGCACATGGGTCTTCAAGGCTTCTTGGTTTTCCACAGCTATAACTGGGT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACATGGGTCTTCAAGGCTTCTTGGTTTTCCACAGCTATAACTGGGT  788

seq1  AACTGGGTCTGGGTTTACCTCCCGCTGATGGAGCGACTCTCTGTTGACTA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGTCTGGGTTTACCTCCCGCTGATGGAGCGACTCTCTGTTGACTA  838

seq1  CAGAAAGAAATCCAAAATGTAGCTCTCCGTTTACCCAGCTCCCCTCCCCC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAAATCCAAAATGTAGCTCTCCGTTTACCCAGCTCCCCTCCCCC  888

seq1  AGGTTTCCATAGCTGTGGTTGAGCACTACAATTCCATCCTTACCAGTCAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCCATAGCTGTGGTTGAGCACTACAATTCCATCCTTACCAGTCAT  938

seq1  GCCTCCCTGGAGCACTCTGTTTGTACCTTCATAGCAGAAAATGAGACAAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCTGGAGCACTCTGTTTGTACCTTCATAGCAGAAAATGAGACAAT  988

seq1  CTTTGACATCTGTCAAAGAAACCTTGACATATACTAACCTTAATCAACTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACATCTGTCAAAGAAACCTTGACATATACTAACCTTAATCAACTT  1038

seq1  ATTAGCCAGATTGTGTCCTTCATCACTTCTTCTCTCAGATATGATGAGGC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCCAGATTGTGTCCTTCATCACTTCTTCTCTCAGATATGATGAGGC  1088

seq1  CCAAAAAGTTGATCTGACAGAATTC  1116
      |||||||||||||||||||||||||
seq2  CCAAAAAGTTGATCTGACAGAATTC  1113


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