BAC Information

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BAC

Clone NameB6Ng01-172C15
Chromosome14 (Build37)
Map Location 5,665,570 - 5,666,713
singlet/doubletsinglet
Overlap geneLOC100041195
Upstream geneEG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706
Downstream geneLOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287, LOC100041299, LOC666637, EG622640, LOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172C15.bB6Ng01-172C15.g
ACCGA000854GA000855
length1,1351,034
definitionB6Ng01-172C15.b B6Ng01-172C15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccatgacctcctcattctgggtaattctccctgaaatgtggat
tatatagtttggccaaattcataggactaggccaaagatcaagagtcctt
gttctgaaagaaaaaaaaaaaggagaaatgtcctcatagtttctgtatac
ccacacctgtgtcataaactactgagagtttagagaccttgtctgtccct
ccaggcctatgcgggagctcaaacaactagaactctaaccgcctggacac
ccagcctctggagacctttggacaagatagcaagattaataagcttagat
gatcctagtacataggaggtagaaggtaacatactgtgagcttggatagt
tcagaatccatcctggattcaggtgacccttgaagcctgtgttcttggga
ctctttgctcttggggccaggcccaaccaaagatcaaatccttactatga
aaaattgaaagtggagactaagcaggtaatgttggacctgcagagcttac
agaatgtgtacactgaggcctcagagacatttgaattcctggcaaagaca
aaggctgctataggtaactgtctgtcttgcttgggagcacatgagctgta
gaattgccatctctgattttgatcctgcacaggagactctcgagctctgg
ttcttgctttctgccacttcacacaggagcctttagatttttctgttgta
aacctgtgggttgaaacactttttggggtaaaaaaaaaggtcaaaggacc
cttttcacagaggttgtgtatcagacaatcctttatctcagacacttcta
ttatggcttataacagtacaaaaatttatagtacccaagtagcaatgaaa
ataatctaaagtttgggaggtcactgcattaaagcatccacagcatttgg
taaattgagaaaccctggtcttgacagaagactatttgtatcatgtgagg
tcttcttgacccccggggctgagtcaggatctatagagagctagttacca
gcagacccatgtatagcaagtattccccttgttcctccttccaatcatag
gtgccttgccaatctctgaatgtttcccattagatgaacaggtaggacac
tgtagtccacttcttcttttaggaacatgggatcc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacactagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactactccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaatatgccccaactggtaagaaggacacatgctccactat
gttcatagcaatagccagaagctggaaagaaccaagatgcccctcaacag
aggaatggatacagaatatgtggtacatctacacaatggagtactactca
gctattaaaaagaatgaatttatgaaattcctagccaaatggatggacct
ggagggcatcatcctgagtgaggtaacacattcacaaaggaactcacaca
atatgtactcactgataagtggatattagcccaaaacctaggatacccaa
gatataagatacaatttcctaaacacatgaaaactcaagataaattgaaa
gactgaagtgtggacactatgcccctctttagaaagtggggaacaaaaac
acccttggaaggagttacagagacaaagtttggagctgagatgaaagaat
ggaccatgttagagactgccatatccagggatccaccccattaatcagca
tcccaaacgctgacaccatttgcatacacttagcaaagattttatcgaag
ggactccagaatgtagctgtcttctttgtgagactattgccggggcctag
caaaacccaaaattagatccctctcagtcagcctaatggatgaattacaa
gggctccccaatgggagtatctagaataaagtatcccaagagtcttaggg
gattctgccacccccatttggttggatcaaacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_5665570_5666713
seq2: B6Ng01-172C15.b_44_1178

seq1  GAATTCACCATGACCTCCTCATTCTGGGTAATTCTCCCTGAAATGTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATGACCTCCTCATTCTGGGTAATTCTCCCTGAAATGTGGAT  50

seq1  TATATAGTTTGGCCAAATTCATAGGACTAGGCCAAAGATCAAGAGTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTTTGGCCAAATTCATAGGACTAGGCCAAAGATCAAGAGTCCTT  100

seq1  GTTCTGAAAGAAAAAAAAAAAGGAGAAATGTCCTCATAGTTTCTGTATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAAAGAAAAAAAAAAAGGAGAAATGTCCTCATAGTTTCTGTATAC  150

seq1  CCACACCTGTGTCATAAACTACTGAGAGTTTAGAGACCTTGTCTGTCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCTGTGTCATAAACTACTGAGAGTTTAGAGACCTTGTCTGTCCCT  200

seq1  CCAGGCCTATGCGGGAGCTCAAACAACTAGAACTCTAACCGCCTGGACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTATGCGGGAGCTCAAACAACTAGAACTCTAACCGCCTGGACAC  250

seq1  CCAGCCTCTGGAGACCTTTGGACAAGATAGCAAGATTAATAAGCTTAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCTGGAGACCTTTGGACAAGATAGCAAGATTAATAAGCTTAGAT  300

seq1  GATCCTAGTACATAGGAGGTAGAAGGTAACATACTGTGAGCTTGGATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTAGTACATAGGAGGTAGAAGGTAACATACTGTGAGCTTGGATAGT  350

seq1  TCAGAATCCATCCTGGATTCAGGTGACCCTTGAAGCCTGTGTTCTTGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATCCATCCTGGATTCAGGTGACCCTTGAAGCCTGTGTTCTTGGGA  400

seq1  CTCTTTGCTCTTGGGGCCAGGCCCAACCAAAGATCAAATCCTTACTATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGCTCTTGGGGCCAGGCCCAACCAAAGATCAAATCCTTACTATGA  450

seq1  AAAATTGAAAGTGGAGACTAAGCAGGTAATGTTGGACCTGCAGAGCTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGAAAGTGGAGACTAAGCAGGTAATGTTGGACCTGCAGAGCTTAC  500

seq1  AGAATGTGTACACTGAGGCCTCAGAGACATTTGAATTCCTGGCAAAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGTACACTGAGGCCTCAGAGACATTTGAATTCCTGGCAAAGACA  550

seq1  AAGGCTGCTATAGGTAACTGTCTGTCTTGCTTGGGAGCACATGAGCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCTATAGGTAACTGTCTGTCTTGCTTGGGAGCACATGAGCTGTA  600

seq1  GAATTGCCATCTCTGATTTTGATCCTGCACAGGAGACTCTCGAGCTCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGCCATCTCTGATTTTGATCCTGCACAGGAGACTCTCGAGCTCTGG  650

seq1  TTCTTGCTTTCTGCCACTTCACACAGGAGCCTTTAGATTTTTCTGTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCTTTCTGCCACTTCACACAGGAGCCTTTAGATTTTTCTGTTGTA  700

seq1  AACCTGTGGGTTGAAACACTTTTTGGGGTAAAAAAAAAGGTCAAAGGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTGGGTTGAAACACTTTTTGGGGTAAAAAAAAAGGTCAAAGGACC  750

seq1  C-TTTCACAGAGGTTGTGTATCAGACAATCCTTTATCTCAGACACTTCTA  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCACAGAGGTTGTGTATCAGACAATCCTTTATCTCAGACACTTCTA  800

seq1  TTATGGCTTATAACAGTACAAAAA-TTATAGTACCCAAGTAGCAATGAAA  848
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTATGGCTTATAACAGTACAAAAATTTATAGTACCCAAGTAGCAATGAAA  850

seq1  ATAATCTTAAGTTTGGGAGGTCACTGCATTAAAGCATCCACAGCATTTGG  898
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTAAAGTTTGGGAGGTCACTGCATTAAAGCATCCACAGCATTTGG  900

seq1  TAAATTGAGAAACCCTGGTCTTGACAGAAGAACTATTTGTATCATGTGAG  948
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAAATTGAGAAACCCTGGTCTTGACAGAAG-ACTATTTGTATCATGTGAG  949

seq1  GTCTTCTTGACCCCCGGGGCTGAGTCAGGATCTATAGAGAGCTAGTTACC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTTGACCCCCGGGGCTGAGTCAGGATCTATAGAGAGCTAGTTACC  999

seq1  AGCAGACCCATGTATAGCAAGTATTCCCCTTGTTTCTCCTTTCCAATTCA  1048
      |||||||||||||||||||||||||||||||||| |||| |||||| |||
seq2  AGCAGACCCATGTATAGCAAGTATTCCCCTTGTTCCTCC-TTCCAA-TCA  1047

seq1  TA-GTGCCTTTGCCCATTCCTTCGTGATGTTTCTCCATTAGGATGGACAG  1097
      || ||||| ||||| ||    ||   ||||||| |||||| |||| ||||
seq2  TAGGTGCC-TTGCCAAT---CTCTGAATGTTTC-CCATTA-GATGAACAG  1091

seq1  GTAGGGACAACTGTAGTCCACTTCTTCTTTTTAGGAAACAT-GGATCC  1144
      ||| |||| |||||||||||||||||| ||||||| ||||| ||||||
seq2  GTA-GGAC-ACTGTAGTCCACTTCTTC-TTTTAGG-AACATGGGATCC  1135