BAC Information

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BAC

Clone NameB6Ng01-172M09
Chromosome14 (Build37)
Map Location 90,912,210 - 91,053,606
singlet/doubletdoublet
Overlap genenone
Upstream geneEG328451, LOC100043336
Downstream geneEG639558
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172M09.bB6Ng01-172M09.g
ACCGA001302GA001303
length986533
definitionB6Ng01-172M09.b B6Ng01-172M09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,912,210 - 90,912,941)(91,053,069 - 91,053,606)
sequence
gaattcttagaagatccttgccatgtctgagtgcccaggggtttgcgaac
cagagcttcggttccagtcagcaatgtttctcacccagagaaacaaaggt
tagggccccatctgatgctgcattctgtcttccctgagtggtaaatcagt
gtgccctgtgagcctggtactcaagtggcaaggaaggaaggtggtcttgc
tttgttttatattcctgagaggcaaccctgcagatattctcaacttctat
ccatttccctaaaacatttatctttgtttttaatagacgagtagtattcc
attgtgtagatgtaatatattatctttttatttatttattttattaggta
tttatttcatttacatttccaatgctatcccaaaagtcccccacatgctc
ccccacccactcccccacttacccacacccacttcttggccctggtattc
ccctgtattgaggcatataaattttgcacaaccaagggggctctccttcc
actgatggccgactaggcaaacttttgatacatatgcagctagagacatg
agctccatgaaatactggctagttcatgctgttgttccacctgtagggtt
gcagatcccccccagcttcttgggtactttctctagctcctccattgggt
gcccggtgacccatccaatagctgactgtgagaatccacttctgtgtttg
ctaggccccagcatagtctcacaagagacagctatatctgggtcctttca
gcaaaattttgctagtgtatgcaatggtgtcagcatttggaagctgatta
tgggatggatccccggatatggccatctctagatggtccatcctgtagtc
tcagctccaaactttgtctctgtaactccttccatgggtgtttgttccca
attctacgaaggggcaaagtgtccacactttggtgtacgttcttcttgag
cttcatgtgtttcacaaattgtgtcttatatcttgg

atcatttgggcaggcaggggaagcctatggaaaagttaggagaagcattg
aaggagctgaaggggatggtagctcccaaagaatgtgccacaaagcaaag
tgcaaacacaggctggtatgagcccaagcatgtatgtagcaatgggctgc
cttgttgggcgccagtggggaaagatgcatctaatcctatagagacttga
tgcccagttttggggattgccagaggagacatcctctcacaggcaaaggg
gagggggattgggtaagaactcagcaagataattttaaaaagtaaaatac
cttgttactaaagtattttatgaatgaaacactgtaatttgaggctttgt
tttattcccgtgatggcttaacaaagtataaactcttctcttctttattg
atgtgaattatatataatcactatctaagacttgaagatttacctttatc
cttatttttaaagattcaaaaaaaaaaaaaaactcttaactattttgaat
tgcactacaccattttcaatgactgaataaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90912210_90912941
seq2: B6Ng01-172M09.b_36_767

seq1  GAATTCTTAGAAGATCCTTGCCATGTCTGAGTGCCCAGGGGTTTGCGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGAAGATCCTTGCCATGTCTGAGTGCCCAGGGGTTTGCGAAC  50

seq1  CAGAGCTTCGGTTCCAGTCAGCAATGTTTCTCACCCAGAGAAACAAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTTCGGTTCCAGTCAGCAATGTTTCTCACCCAGAGAAACAAAGGT  100

seq1  TAGGGCCCCATCTGATGCTGCATTCTGTCTTCCCTGAGTGGTAAATCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCCCCATCTGATGCTGCATTCTGTCTTCCCTGAGTGGTAAATCAGT  150

seq1  GTGCCCTGTGAGCCTGGTACTCAAGTGGCAAGGAAGGAAGGTGGTCTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCTGTGAGCCTGGTACTCAAGTGGCAAGGAAGGAAGGTGGTCTTGC  200

seq1  TTTGTTTTATATTCCTGAGAGGCAACCCTGCAGATATTCTCAACTTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTATATTCCTGAGAGGCAACCCTGCAGATATTCTCAACTTCTAT  250

seq1  CCATTTCCCTAAAACATTTATCTTTGTTTTTAATAGACGAGTAGTATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCCTAAAACATTTATCTTTGTTTTTAATAGACGAGTAGTATTCC  300

seq1  ATTGTGTAGATGTAATATATTATCTTTTTATTTATTTATTTTATTAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTAGATGTAATATATTATCTTTTTATTTATTTATTTTATTAGGTA  350

seq1  TTTATTTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCCACATGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCCACATGCTC  400

seq1  CCCCACCCACTCCCCCACTTACCCACACCCACTTCTTGGCCCTGGTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCACTCCCCCACTTACCCACACCCACTTCTTGGCCCTGGTATTC  450

seq1  CCCTGTATTGAGGCATATAAATTTTGCACAACCAAGGGGGCTCTCCTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTATTGAGGCATATAAATTTTGCACAACCAAGGGGGCTCTCCTTCC  500

seq1  ACTGATGGCCGACTAGGCAAACTTTTGATACATATGCAGCTAGAGACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGGCCGACTAGGCAAACTTTTGATACATATGCAGCTAGAGACATG  550

seq1  AGCTCCATGAAATACTGGCTAGTTCATGCTGTTGTTCCACCTGTAGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCATGAAATACTGGCTAGTTCATGCTGTTGTTCCACCTGTAGGGTT  600

seq1  GCAGATCCCCCCCAGCTTCTTGGGTACTTTCTCTAGCTCCTCCATTGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATCCCCCCCAGCTTCTTGGGTACTTTCTCTAGCTCCTCCATTGGGT  650

seq1  GCCCGGTGACCCATCCAATAGCTGACTGTGAGAATCCACTTCTGTGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGTGACCCATCCAATAGCTGACTGTGAGAATCCACTTCTGTGTTTG  700

seq1  CTAGGCCCCAGCATAGTCTCACAAGAGACAGC  732
      ||||||||||||||||||||||||||||||||
seq2  CTAGGCCCCAGCATAGTCTCACAAGAGACAGC  732


seq1: chr14_91053069_91053606
seq2: B6Ng01-172M09.g_63_601 (reverse)

seq1  AATTTATTCAGTCATTG-AAATGGTGTAGTGCAATTCAAAATAGTTAAGA  49
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTTTATTCAGTCATTGAAAATGGTGTAGTGCAATTCAAAATAGTTAAGA  50

seq1  GTTTTTTTTTTTTTTTGAATCTTTAAAAATAAGGATAAAGGTAAATCTTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTTTTTTGAATCTTTAAAAATAAGGATAAAGGTAAATCTTC  100

seq1  AAGTCTTAGATAGTGATTATATATAATTCACATCAATAAAGAAGAGAAGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTAGATAGTGATTATATATAATTCACATCAATAAAGAAGAGAAGA  150

seq1  GTTTATACTTTGTTAAGCCATCACGGGAATAAAACAAAGCCTCAAATTAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATACTTTGTTAAGCCATCACGGGAATAAAACAAAGCCTCAAATTAC  200

seq1  AGTGTTTCATTCATAAAATACTTTAGTAACAAGGTATTTTACTTTTTAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTCATTCATAAAATACTTTAGTAACAAGGTATTTTACTTTTTAAA  250

seq1  ATTATCTTGCTGAGTTCTTACCCAATCCCCCTCCCCTTTGCCTGTGAGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTGCTGAGTTCTTACCCAATCCCCCTCCCCTTTGCCTGTGAGAG  300

seq1  GATGTCTCCTCTGGCAATCCCCAAAACTGGGCATCAAGTCTCTATAGGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTCCTCTGGCAATCCCCAAAACTGGGCATCAAGTCTCTATAGGAT  350

seq1  TAGATGCATCTTTCCCCACTGGCGCCCAACAAGGCAGCCCATTGCTACAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCATCTTTCCCCACTGGCGCCCAACAAGGCAGCCCATTGCTACAT  400

seq1  ACATGCTTGGGCTCATACCAGCCTGTGTTTGCACTTTGCTTTGTGGCACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTTGGGCTCATACCAGCCTGTGTTTGCACTTTGCTTTGTGGCACA  450

seq1  TTCTTTGGGAGCTACCATCCCCTTCAGCTCCTTCAATGCTTCTCCTAACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGGAGCTACCATCCCCTTCAGCTCCTTCAATGCTTCTCCTAACT  500

seq1  TTTCCATAGGCTTCCCCTGCCTGCCCAAATGATGAATTC  538
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATAGGCTTCCCCTGCCTGCCCAAATGATGAATTC  539


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