BAC Information

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BAC

Clone NameB6Ng01-173I09
Chromosome14 (Build37)
Map Location 109,087,634 - 109,088,781
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668752, EG668754, LOC668757
Downstream geneEG668761, Slitrk1, LOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173I09.bB6Ng01-173I09.g
ACCGA001848GA001849
length1,1261,187
definitionB6Ng01-173I09.b B6Ng01-173I09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctataattctctctcattcacagttgactataccagtattggttt
gcaaaaacacaacactttaaaaagatttaatgctctcacaaaaaaaaaaa
aaaaaaaaaaaaaaatcttttctttacctgccttcaagtcttaaagacac
ttcttctagcactaaaaagatataacaccctgggggctgtttgacagata
aatagaacaactgatagagcggggaacttcaacgtaatgtctagaaaaaa
attagttattgtaaatgtaagagtctactcttcttaaaaggcccccattg
gaacagtagttcacagagtaaaaactaaaggcacaagtaaaggtaatcga
aggtaaatctaatgaaactcattttggtaaagacatggaacaaagcccat
tagattgtctaaattacatttgctttctctgcagtcattcctataatcat
tacctaaagctaatgctaacctagtggagtcccaccccctcaaaggaaaa
aataaaagaaaaggcagacagaaaaaagaaagaaacaaagaaacaaagag
acaaacaaacaaacaaaacaccttctcattacatactgtacttcaaatag
aaaacccttagtgtcctgaagtttgaagtgttaaaaatttgacttctcaa
ttaccccaatttccttcaacacttaaatcaatttctaaagacaatttagg
catctgacacgatacatgtacattgcttttcttatttcaagcaatttcta
taatcacttgtttctttccatcactgctacaaactggatggcttcattga
tctgttttccattctgcacattgagaattcatgaaactttgtgcagtgga
tgatactttgatctgcaagcactgaatctctttgttattgtaaactatgg
cattctttttaaggaaatgacctctattcactacatatctgctatctagt
tgagggatttgaaccatgacatattgtctgcccacttgtagacaaagaaa
tataagattcgttgcatccctccttcatctaatgctgtgaagttctatgt
ctatgaagcctcatgtcagaaatttatgtctgggatttctgctctgaagg
tctgtgaaaaggacatatagaaaaga
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaaat
gttcagcatccttaatcatcagggaaatgcaaattaaaacaaccctgagc
ttctacctcacaccagtctgagtggctaagatcaaaaattcaggtgacag
cagatgctggcaaggatgtggagaaagaggaacactcctccattgtgggt
gggattgcaagctagtacaaccactctggaaatatgcctggcagtttctc
agaaaattggaaatagtactactggaggatcttgcaatacctctcctggg
catatatccagaagatattccaactggtaaggacacatgctctactatgt
tcatagcagccttatttataatagccagaaggtggaaaaacccagatgcc
cctcaacataggaatggatacagaaaatgtggtacatttacacaatgcag
tactactcagctattaaaaagaatgaatttatgaaattcctaggcaaacg
gatagaactggagggtatcatcctgagtgaggcaatccaatcacaaaaga
actcacatgatatgtactcactgataagtcgatattagccctgagactta
gtatacccaagatataagatacaatttgcaaaaaagaaaaaagaaaaaaa
aagagaaacgcaagaagaacgaagaccaaagtgtggtcactttgcccctt
cttagatttagaaacaaaacacccatggaaagagttacagagacaaagtt
tggagctgagactaaaggagggactatccaggtactgctgccccagaggt
ccatcccataaatcagcctccaaaatgcagacacaattgcattacgcctg
caagatttttctgaaaggtccctgaaatagctgtctcttgtgaggctatg
cagtacctggcaaacacaggcccccaatggagaagctagagaaagtacca
aggagctaaaaggtcctccaacccttatagttggaacagccattattgaa
caaaccagtacccccagaagcctcatgtcttcttgctgcatacgttagcc
cgaagaatggtctagttggccatcaattgtgtatgagaggctcgttggtc
ttgccacctttaattgcctcagtaatgggaaacccaaagccatagcataa
gtacgtgggtggctatactggagttggagccacaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_109087634_109088781
seq2: B6Ng01-173I09.b_31_1156 (reverse)

seq1  TCTTTTCTATATTGGCTCCTTTTTCCACAGAAACTTCCAAGAGCAGGAAA  50
      ||||||||||||    |||||||  ||||| | ||||  |||||||  ||
seq2  TCTTTTCTATAT---GTCCTTTT--CACAG-ACCTTC--AGAGCAG--AA  40

seq1  TTCCCAGACATAAAATATTCTGACCATGA-GCTTCATTAGGACATAGAAC  99
       |||||||||||||   |||||| ||||| |||||||   ||||||||||
seq2  ATCCCAGACATAAA--TTTCTGA-CATGAGGCTTCAT--AGACATAGAAC  85

seq1  TTCCAACAGCAATTAGGAATGAAAGGAAGGGATGCAACGAATC-TATATT  148
      |||  ||||| |||||  |||||  | |||||||||||||||| ||||||
seq2  TTC--ACAGC-ATTAG--ATGAA--GGAGGGATGCAACGAATCTTATATT  128

seq1  TCTTTGTCTAACAAGTGGGCAGACAATATGTCATGGTTCAAATCCTTCAA  198
      ||||||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  TCTTTGTCT-ACAAGTGGGCAGACAATATGTCATGGTTCAAATCCCTCAA  177

seq1  CTAGATAGCAGATATGTAGTGAATAGAGGTCATTTCCTTAAAAAGAATGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATAGCAGATATGTAGTGAATAGAGGTCATTTCCTTAAAAAGAATGC  227

seq1  CAATAGTTTACAATAACAAAGAGATTCAGTGCTTGCAGATCAAAGTATCA  298
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-ATAGTTTACAATAACAAAGAGATTCAGTGCTTGCAGATCAAAGTATCA  276

seq1  TCCACTGCACAAAGTTTCATGAATTCTCAATGTGCAGAATGGAAAACAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGCACAAAGTTTCATGAATTCTCAATGTGCAGAATGGAAAACAGA  326

seq1  TCAATGAAGCCATCCAGTTTGTAGCAGTGATGGAAAGAAACAAGTGATTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAAGCCATCCAGTTTGTAGCAGTGATGGAAAGAAACAAGTGATTA  376

seq1  TAGAAATTGCTTGAAATAAGAAAAGCAATGTACATGTATCGTGTCAGATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTGCTTGAAATAAGAAAAGCAATGTACATGTATCGTGTCAGATG  426

seq1  CCTAAATTGTCTTTAGAAATTGATTTAAGTGTTGAAGGAAATTGGGGTAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATTGTCTTTAGAAATTGATTTAAGTGTTGAAGGAAATTGGGGTAA  476

seq1  TTGAGAAGTCAAATTTTTAACACTTCAAACTTCAGGACACTAAGGGTTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAGTCAAATTTTTAACACTTCAAACTTCAGGACACTAAGGGTTTT  526

seq1  CTATTTGAAGTACAGTATGTAATGAGAAGGTGTTTTGTTTGTTTGTTTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGAAGTACAGTATGTAATGAGAAGGTGTTTTGTTTGTTTGTTTGT  576

seq1  CTCTTTGTTTCTTTGTTTCTTTCTTTTTTCTGTCTGCCTTTTCTTTTATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGTTTCTTTGTTTCTTTCTTTTTTCTGTCTGCCTTTTCTTTTATT  626

seq1  TTTTCCTTTGAGGGGGTGGGACTCCACTAGGTTAGCATTAGCTTTAGGTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTGAGGGGGTGGGACTCCACTAGGTTAGCATTAGCTTTAGGTA  676

seq1  ATGATTATAGGAATGACTGCAGAGAAAGCAAATGTAATTTAGACAATCTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTATAGGAATGACTGCAGAGAAAGCAAATGTAATTTAGACAATCTA  726

seq1  ATGGGCTTTGTTCCATGTCTTTACCAAAATGAGTTTCATTAGATTTACCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTTTGTTCCATGTCTTTACCAAAATGAGTTTCATTAGATTTACCT  776

seq1  TCGATTACCTTTACTTGTGCCTTTAGTTTTTACTCTGTGAACTACTGTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATTACCTTTACTTGTGCCTTTAGTTTTTACTCTGTGAACTACTGTTC  826

seq1  CAATGGGGGCCTTTTAAGAAGAGTAGACTCTTACATTTACAATAACTAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGGGCCTTTTAAGAAGAGTAGACTCTTACATTTACAATAACTAAT  876

seq1  TTTTTTCTAGACATTACGTTGAAGTTCCCCGCTCTATCAGTTGTTCTATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTAGACATTACGTTGAAGTTCCCCGCTCTATCAGTTGTTCTATT  926

seq1  TATCTGTCAAACAGCCCCCAGGGTGTTATATCTTTTTAGTGCTAGAAGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTCAAACAGCCCCCAGGGTGTTATATCTTTTTAGTGCTAGAAGAA  976

seq1  GTGTCTTTAAGACTTGAAGGCAGGTAAAGAAAAGATTTTTTTTTTTTTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTTAAGACTTGAAGGCAGGTAAAGAAAAGATTTTTTTTTTTTTTT  1026

seq1  TTTTTTTTTTTGTGAGAGCATTAAATCTTTTTAAAGTGTTGTGTTTTTGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTGTGAGAGCATTAAATCTTTTTAAAGTGTTGTGTTTTTGC  1076

seq1  AAACCAATACTGGTATAGTCAACTGTGAATGAGAGAGAATTATAGAATTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAATACTGGTATAGTCAACTGTGAATGAGAGAGAATTATAGAATTC  1126