BAC Information

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BAC

Clone NameB6Ng01-173L05
Chromosome14 (Build37)
Map Location 79,855,329 - 80,045,132
singlet/doubletdoublet
Overlap geneWbp4, Elf1, LOC668560, Sugt1, Lect1
Upstream geneLOC219180, Akap11, Dgkh, LOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879
Downstream genePcdh8, EG629734, Olfm4, LOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173L05.bB6Ng01-173L05.g
ACCGA001977GA001978
length1471,016
definitionB6Ng01-173L05.b B6Ng01-173L05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,044,986 - 80,045,132)(79,855,329 - 79,856,336)
sequence
tccctgtcttcctggctcttgggagccccctccactggcctgagcgtggt
gggactcatgtagcttgggatgtgtgtaggctgagtcttggtaattagca
tgagagatacaagagaaggaaaatgacgaggtgggggtgggggtggg
gaattcaggacctctggaggagcagtcagtgctcttaaacgctgagctat
ctctccagcccaagaaatcgtattttcgaactcaaattttcagggttctt
ttccacagtcttaaggactgttctgacggtctcagcatttatcattttac
caagacattaatcacacccacatatcccaaactcctgctatctcattatc
atagagttgttgaccttaattaggacattccttgaaggaagaatgtgaaa
atatatgcccacagctctgttccaggggtgggaaccatgttattccaacc
cttacatggccatgccagacttgggggaaaaatatttgcatattgtatat
atatttgtagtatagatatgtgtatatataaatagcaacagcaaaagaaa
acctgtttgtaaattaattttgaaatacaaaatgtgtatttgcaaaacga
tcaattttcatctaaaaggatattcaaatattgtttccaattacctgtaa
tatttttccttatttatttatttattcactgtatagcctggtcacagcct
tcctcagtcactcatccctccattcccttttcttcagatatggggagcct
cccctatgggcaccaacccatcttcgtacattaagcctcagcagtactaa
gggcatcctctcccactgagaccatacgaagcagcccagctatgggaaag
agatccaaaggcaagcagcagagttagagatagactccacactaattgtt
aggggcccaaatgaagaacaaactgcacatcagctacatctgtgtagggg
gcctaggggcagcctctgcatgctatttggttggtggaccaatctctgtg
ttcctccattggtccaagttagtttactctgtaggtcttcttgtgatggc
tttgatcctctggcgctctcaattccttcccccttactcttcgcaggact
ccctaagctctgccttgtttagctgtgggcctctgcagtgttttattagc
ggctggataaatctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80044986_80045132
seq2: B6Ng01-173L05.b_44_190 (reverse)

seq1  CCCACCCCCACCCCCACCTCGTCATTTTCCTTCTCTTGTATCTCTCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCACCCCCACCTCGTCATTTTCCTTCTCTTGTATCTCTCATGC  50

seq1  TAATTACCAAGACTCAGCCTACACACATCCCAAGCTACATGAGTCCCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACCAAGACTCAGCCTACACACATCCCAAGCTACATGAGTCCCACC  100

seq1  ACGCTCAGGCCAGTGGAGGGGGCTCCCAAGAGCCAGGAAGACAGGGA  147
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCAGGCCAGTGGAGGGGGCTCCCAAGAGCCAGGAAGACAGGGA  147

seq1: chr14_79855329_79856336
seq2: B6Ng01-173L05.g_67_1074

seq1  GAATTCAGGACCTCTGGAGGAGCAGTCAGTGCTCTTAAACGCTGAGCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCTCTGGAGGAGCAGTCAGTGCTCTTAAACGCTGAGCTAT  50

seq1  CTCTCCAGCCCAAGAAATCGTATTTTCGAACTCAAATTTTCAGGGTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGCCCAAGAAATCGTATTTTCGAACTCAAATTTTCAGGGTTCTT  100

seq1  TTCCACAGTCTTAAGGACTGTTCTGACGGTCTCAGCATTTATCATTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAGTCTTAAGGACTGTTCTGACGGTCTCAGCATTTATCATTTTAC  150

seq1  CAAGACATTAATCACACCCACATATCCCAAACTCCTGCTATCTCATTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACATTAATCACACCCACATATCCCAAACTCCTGCTATCTCATTATC  200

seq1  ATAGAGTTGTTGACCTTAATTAGGACATTCCTTGAAGGAAGAATGTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTTGTTGACCTTAATTAGGACATTCCTTGAAGGAAGAATGTGAAA  250

seq1  ATATATGCCCACAGCTCTGTTCCAGGGGTGGGAACCATGTTATTCCAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGCCCACAGCTCTGTTCCAGGGGTGGGAACCATGTTATTCCAACC  300

seq1  CTTACATGGCCATGCCAGACTTGGGGGAAAAATATTTGCATATTGTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATGGCCATGCCAGACTTGGGGGAAAAATATTTGCATATTGTATAT  350

seq1  ATATTTGTAGTATAGATATGTGTATATATAAATAGCAACAGCAAAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTAGTATAGATATGTGTATATATAAATAGCAACAGCAAAAGAAA  400

seq1  ACCTGTTTGTAAATTAATTTTGAAATACAAAATGTGTATTTGCAAAACGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTTGTAAATTAATTTTGAAATACAAAATGTGTATTTGCAAAACGA  450

seq1  TCAATTTTCATCTAAAAGGATATTCAAATATTGTTTCCAATTACCTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTCATCTAAAAGGATATTCAAATATTGTTTCCAATTACCTGTAA  500

seq1  TATTTTTCCTTATTTATTTATTTATTCACTGTATAGCCTGGTCACAGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCCTTATTTATTTATTTATTCACTGTATAGCCTGGTCACAGCCT  550

seq1  TCCTCAGTCACTCATCCCTCCATTCCCTTTTCTTCAGATATGGGGAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGTCACTCATCCCTCCATTCCCTTTTCTTCAGATATGGGGAGCCT  600

seq1  CCCCTATGGGCACCAACCCATCTTCGTACATTAAGCCTCAGCAGTACTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTATGGGCACCAACCCATCTTCGTACATTAAGCCTCAGCAGTACTAA  650

seq1  GGGCATCCTCTCCCACTGAGACCATACGAAGCAGCCCAGCTATGGGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCCTCTCCCACTGAGACCATACGAAGCAGCCCAGCTATGGGAAAG  700

seq1  AGATCCAAAGGCAAGCAGCAGAGTTAGAGATAGACTCCACACTAATTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCAAAGGCAAGCAGCAGAGTTAGAGATAGACTCCACACTAATTGTT  750

seq1  AGGGGCCCAAATGAAGAACAAACTGCACATCAGCTACATCTGTGTAGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCCCAAATGAAGAACAAACTGCACATCAGCTACATCTGTGTAGGGG  800

seq1  GCCTAGGGGCAGCCTCTGCATGCTATTTGGTTGGTGGACCAATCTCTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGGGGCAGCCTCTGCATGCTATTTGGTTGGTGGACCAATCTCTGTG  850

seq1  TTCCTCCATTGGTCCAAGTTAGTTTACTCTGTAGGTCTTCTTGTGATGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCATTGGTCCAAGTTAGTTTACTCTGTAGGTCTTCTTGTGATGGC  900

seq1  TTTGATCCTCTGGCGCTCTCAA-TCCTTCCCCC-TACTCTTCGCAGGACT  948
      |||||||||||||||||||||| |||||||||| ||||||||||||||||
seq2  TTTGATCCTCTGGCGCTCTCAATTCCTTCCCCCTTACTCTTCGCAGGACT  950

seq1  CCCTAAGCTCTGCCTTGTTTAGCTGTGGGCCTCTGCAGTTGTTTTTATTA  998
      |||||||||||||||||||||||||||||||||||||||   ||||||||
seq2  CCCTAAGCTCTGCCTTGTTTAGCTGTGGGCCTCTGCAGT--GTTTTATTA  998

seq1  GCGGCTGGAT  1008
      ||||||||||
seq2  GCGGCTGGAT  1008