BAC Information

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BAC

Clone NameB6Ng01-173N14
Chromosome14 (Build37)
Map Location 9,468,384 - 9,469,503
singlet/doubletsinglet
Overlap gene4930452B06Rik
Upstream geneLOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005
Downstream geneLOC100041948, Fhit
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173N14.bB6Ng01-173N14.g
ACCGA002087GA002088
length1,1091,188
definitionB6Ng01-173N14.b B6Ng01-173N14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaataccaaagtggctacagcaagtatggggaacagagtaatctc
aggaggcagagctagctaggatcagccccagaaaagcccatgatgccccg
tgacaatcaactctgtagtgagcttggatggagctcagaatgcccaagac
caacttctataacttaaaatagagattccaatcattgtttaaattaaagc
agatacccagctactttaaacagaatttgaatgtgaccaagacttgcaat
gtcattttcagttttatctatccagctttaaagagatgattgaactatac
ctgtggatctcaaccttttggtgaaacactggctcctgtactcatcctaa
acatataaacatgctcatcttaatatgtatgtaagatttgaaagtggaga
gttacatggctgcttctgaagtaacagaagtaatacagccccatttcaaa
atcattaccacatcattttaaacattcttttacctagctctgaaacgtta
tttctattaaaggaaccctaagtgtgaccattaccatctcaccacctttg
gaccacctttgtcttcacacttttcctcctccctgctgcccgagcataca
acataaacaaaccgaaagcagcaaaaggagttcaaagatttagagataac
aacaggagtctgccatctacagattgctgtggattaggtactatgttatc
tgtctgtaagtaacacatggttcaactagcgctgctgcaatctattgtaa
tatcttggcagtatcttttacaaataggatcaaaaaattcaaagtctaat
gatagcctcatcagaatgcattatgcctgggctctccaatatctcatgtt
ctggttagagttggggctggctgtagaggcacagaagtaagatgaccact
gtgacataaatgccataaggttccagagatgctatcataagatgcactca
actaatgttctaagtatctcaatcttatatgttcaaatgcccattatagg
gctagagacagatcatcagtttagaggtgggtactgctctgtagaggacc
catgttcaattcccagtactgtgtctgatgctcacactgcctgtactcag
tctggagac
gaattcttggaagtccggacacgggaagtcctttcgttatgcaattggct
tatgagaatgctaatgcaatttgccgagctgcgattcaaccgcataaggg
aacgacagatttggcgggatatgtccgcctttgcgcagacatcgggcctt
cctgcgagaccttgcagggaacccacgcgcaggcaatgttctcaaggaaa
cgagggaaaaatgtatgctttaagtgtggaggtttagatcattttagaat
tgattgtcctcagaacaagggtgccgaggttagacaaacaggccgtggcc
caggaatatgtccccggtgtggaaagggccgccactgggcgaaagattgt
aagcataaaacgagggttttgagccgcccggtgccgggaaacgaggaaag
gggtcagccccaggccccgagttactcaaagaagacagcttatggggcta
taaatctgctgcccagccaacaagatcagttcttgagcttgtcaggtcaa
acccaggaaatgcaagactggacctctgttccactgtccatgtagcatta
accccagaagtgggagtccaaactctgcctaccggagtttttggaccact
acctgtaggaacctgtggttttctcttaggacgaagcagttctattgtag
aaggcctgcagatttatccaggtgttataagtaatgattatgagggagaa
attaaaatcatagccgcttgccctcgtggtgctataactatacccgctaa
tcagaaaattgctcaacttactttgatccctttgcgctggtcactatcta
aattctttgaaaatgaagaaggacagaataactttgactcccttggcgta
aattggtgaaatctatcactaatcagagacctaaccttaaattgattctt
gatggaaaaagctttgaaggattaatagataccggggccgatgtaacgat
atttagagggcaggactggccctcaaactggcccctgtctgtttccttga
ctcacctcaaggaattggttatgccagtaacccaacgtagttccaaattg
ctacctggagagatgagatgaaaatcagaatattcagcgtatggttatgc
aattgccctgtacctgtgggatgagacctgtgttctacgattggcgtatc
ttgtgacgtgatctctaaggagaaatgtgtgaacctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_9468384_9469503
seq2: B6Ng01-173N14.b_45_1153

seq1  GAATTCAATACCAAAGTGGCTACAGCAAGTATGGGGAACAGAGTAATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACCAAAGTGGCTACAGCAAGTATGGGGAACAGAGTAATCTC  50

seq1  AGGAGGCAGAGCTAGCTAGGATCAGCCCCAGAAAAGCCCATGATGCCCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCAGAGCTAGCTAGGATCAGCCCCAGAAAAGCCCATGATGCCCCG  100

seq1  TGACAATCAACTCTGTAGTGAGCTTGGATGGAGCTCAGAATGCCCAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATCAACTCTGTAGTGAGCTTGGATGGAGCTCAGAATGCCCAAGAC  150

seq1  CAACTTCTATAACTTAAAATAGAGATTCCAATCATTGTTTAAATTAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCTATAACTTAAAATAGAGATTCCAATCATTGTTTAAATTAAAGC  200

seq1  AGATACCCAGCTACTTTAAACAGAATTTGAATGTGACCAAGACTTGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCCAGCTACTTTAAACAGAATTTGAATGTGACCAAGACTTGCAAT  250

seq1  GTCATTTTCAGTTTTATCTATCCAGCTTTAAAGAGATGATTGAACTATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTCAGTTTTATCTATCCAGCTTTAAAGAGATGATTGAACTATAC  300

seq1  CTGTGGATCTCAACCTTTTGGTGAAACACTGGCTCCTGTACTCATCCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGATCTCAACCTTTTGGTGAAACACTGGCTCCTGTACTCATCCTAA  350

seq1  ACATATAAACATGCTCATCTTAATATGTATGTAAGATTTGAAAGTGGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAACATGCTCATCTTAATATGTATGTAAGATTTGAAAGTGGAGA  400

seq1  GTTACATGGCTGCTTCTGAAGTAACAGAAGTAATACAGCCCCATTTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATGGCTGCTTCTGAAGTAACAGAAGTAATACAGCCCCATTTCAAA  450

seq1  ATCATTACCACATCATTTTAAACATTCTTTTACCTAGCTCTGAAACGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTACCACATCATTTTAAACATTCTTTTACCTAGCTCTGAAACGTTA  500

seq1  TTTCTATTAAAGGAACCCTAAGTGTGACCATTACCATCTCACCACCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTAAAGGAACCCTAAGTGTGACCATTACCATCTCACCACCTTTG  550

seq1  GACCACCTTTGTCTTCACACTTTTCCTCCTCCCTGCTGCCCGAGCATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACCTTTGTCTTCACACTTTTCCTCCTCCCTGCTGCCCGAGCATACA  600

seq1  ACATAAACAAACCGAAAGCAGCAAAAGGAGTTCAAAGATTTAGAGATAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACAAACCGAAAGCAGCAAAAGGAGTTCAAAGATTTAGAGATAAC  650

seq1  AACAGGAGTCTGCCATCTACAGATTGCTGTGGATTAGGTACTATGTTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAGTCTGCCATCTACAGATTGCTGTGGATTAGGTACTATGTTATC  700

seq1  TGTCTGTAAGTAACACATGGTTCAACTAGCGCTGCTGCAATCTATTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTAAGTAACACATGGTTCAACTAGCGCTGCTGCAATCTATTGTAA  750

seq1  TATCTTGGCAGTATCTTTTACAAATAGGATCAAAAAATTCAAAGTCTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGGCAGTATCTTTTACAAATAGGATCAAAAAATTCAAAGTCTAAT  800

seq1  GATAGCCTCATCAGAATGCATTATGCCTGGGCTCTCCAATATCTCATGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCTCATCAGAATGCATTATGCCTGGGCTCTCCAATATCTCATGTT  850

seq1  CTGGTTAGAGTTGGGGCTGGCTGTAGAGGCACAGAAGTAAGATGACCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTAGAGTTGGGGCTGGCTGTAGAGGCACAGAAGTAAGATGACCACT  900

seq1  GTGACATAAATGCCATAAAGGTTCCAGAGATGCTATCATAAGATGCACTC  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGACATAAATGCCAT-AAGGTTCCAGAGATGCTATCATAAGATGCACTC  949

seq1  AACTAAATGTTCTAAGTATCTCAATC-TATATGTTCAAATGCCCATTATT  999
      |||| ||||||||||||||||||||| |||||||||||||||||||||| 
seq2  AACT-AATGTTCTAAGTATCTCAATCTTATATGTTCAAATGCCCATTAT-  997

seq1  AGGGGCTAGAGACAGATCATCAGTTAAGA-GTGGGTACTGCTCTTGTAGA  1048
        ||||||||||||||||||||||| ||| ||||||||||||| ||||||
seq2  -AGGGCTAGAGACAGATCATCAGTTTAGAGGTGGGTACTGCTC-TGTAGA  1045

seq1  GGACCCATGTTCAATTCCCAGTACCTGTGTCTGATGGCTCACCAACTGCC  1098
      ||||||||||||||||||||||| ||||||||||| ||||||  ||||||
seq2  GGACCCATGTTCAATTCCCAGTA-CTGTGTCTGAT-GCTCAC--ACTGCC  1091

seq1  TGTAACTCCAGTTCCTGGAGAC  1120
      ||| ||| ||||  ||||||||
seq2  TGT-ACT-CAGT--CTGGAGAC  1109