BAC Information

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BAC

Clone NameB6Ng01-174A14
Chromosome14 (Build37)
Map Location 9,891,969 - 9,892,815
singlet/doubletsinglet
Overlap geneLOC100041948
Upstream geneRpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
Downstream geneFhit, LOC100042415
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174A14.bB6Ng01-174A14.g
ACCGA002224GA002225
length798849
definitionB6Ng01-174A14.b B6Ng01-174A14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctaagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatatgatttaggataggtaaaaatcctttcctaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcataagctttgcagtttca
tgaggtcccttttgtcaattcttgatcttacagcacaagccactgctgtt
ctattcaggaatttttcctctgtgcccatatcttcgaggtctttacccac
tttctcttctataagtttcagtgtctctggttttaagtgaagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcaattccc
attcttctacataataacaaccagttgtgccagcaccatttgttgaaaat
cctgtctttcttccactggatggttttagctctcttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctctttgattgg
tctacttgtctgtcgctatacgagtaccatgaagtgtttatcagaattgc
tctgtagtacaactttaggtaaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggtttttttgtttattccaga
tgaatctgccgattgccctttctaatttcgttgaagaattgagtttggaa
ttttgaatgggggattgcattggaatctgtatattgcttttggccaga
gaattctaggagagcacacagcatattagctttagccctgacgttgataa
atcgcctgggctctgcggaatgcgaaaggatattgtagggagaaatgcta
tactgtctgtgatagcactttgaggtctccagagaaaggcatctatttaa
atgtggcaaaagccaaggattgaagagaatcccaggatctcgaggctctt
gatgcagctccaccacgtggccagtggtgggagatggtggtctgtgtgtc
actgccgggagaatgtcctcctgcagacagcaggatatgctgttggccat
ctggtctataagtggtcattgtatctactctattcttaagcaaagccacc
atagccagctttttaacactaaactccccctaaaagcatccttactaggg
tggattttttttatctgatcatgatcatgataaagggtaggttttgctta
ccagtttacatttatatctgaatgtagctaaccccatcttttaatgctca
agaaccctctatgtgttacggaaattatggaggaaatttcttatgagccc
agatagcaatgatagcaattgtcctaactcatgaccttgaatttctctaa
aatcctatatattcatcttgctgagtacatagaagaatccaataattaca
gttgtataggaagtaaaagtggggtctcaccaacctcctacctcctgagg
ttgcctatttccattctttctgctgggtcctcagagcttcagttcttttc
ctcccacccaatcaggttcccctctccacccacatccttccaggtacctc
ccttccccgccccccttgtggtgctttcttctctctcccaagtggaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_9891969_9892815
seq2: B6Ng01-174A14.g_72_920 (reverse)

seq1  AGTTCCACTTGGGAGAGAGAAGAAAGCAACCACAA-GGGGGCGGGG-AGG  48
      ||||||||||||||||||||||||||| ||||||| |||||||||| |||
seq2  AGTTCCACTTGGGAGAGAGAAGAAAGC-ACCACAAGGGGGGCGGGGAAGG  49

seq1  GAGGTACCTGGGAGGATGTGGGTGGAGAGGGGAACCTGATTGGGTGGGAG  98
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAGGTACCTGGAAGGATGTGGGTGGAGAGGGGAACCTGATTGGGTGGGAG  99

seq1  GAAAAGAACTGAAGCTCTGAGGA-CCAGCAGAAAGAATGGAAATAGGCAA  147
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAAAAGAACTGAAGCTCTGAGGACCCAGCAGAAAGAATGGAAATAGGCAA  149

seq1  CCTCAGGAGGTAGGAGGTTGGTGAGACCCCACTTTTACTTCCTATACAAC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGAGGTAGGAGGTTGGTGAGACCCCACTTTTACTTCCTATACAAC  199

seq1  TGTAATTATTGGATTCTTCTATGTACTCAGCAAGATGAATATATAGGATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTATTGGATTCTTCTATGTACTCAGCAAGATGAATATATAGGATT  249

seq1  TTAGAGAAATTCAAGGTCATGAGTTAGGACAATTGCTATCATTGCTATCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAAATTCAAGGTCATGAGTTAGGACAATTGCTATCATTGCTATCT  299

seq1  GGGCTCATAAGAAATTTCCTCCATAATTTCCGTAACACATAGAGGGTTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCATAAGAAATTTCCTCCATAATTTCCGTAACACATAGAGGGTTCT  349

seq1  TGAGCATTAAAAGATGGGGTTAGCTACATTCAGATATAAATGTAAACTGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATTAAAAGATGGGGTTAGCTACATTCAGATATAAATGTAAACTGG  399

seq1  TAAGCAAAACCTACCCTTTATCATGATCATGATCAGATAAAAAAAATCCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAAAACCTACCCTTTATCATGATCATGATCAGATAAAAAAAATCCA  449

seq1  CCCTAGTAAGGATGCTTTTAGGGGGAGTTTAGTGTTAAAAAGCTGGCTAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGTAAGGATGCTTTTAGGGGGAGTTTAGTGTTAAAAAGCTGGCTAT  499

seq1  GGTGGCTTTGCTTAAGAATAGAGTAGATACAATGACCACTTATAGACCAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTTTGCTTAAGAATAGAGTAGATACAATGACCACTTATAGACCAG  549

seq1  ATGGCCAACAGCATATCCTGCTGTCTGCAGGAGGACATTCTCCCGGCAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCAACAGCATATCCTGCTGTCTGCAGGAGGACATTCTCCCGGCAGT  599

seq1  GACACACAGACCACCATCTCCCACCACTGGCCACGTGGTGGAGCTGCATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACAGACCACCATCTCCCACCACTGGCCACGTGGTGGAGCTGCATC  649

seq1  AAGAGCCTCGAGATCCTGGGATTCTCTTCAATCCTTGGCTTTTGCCACAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCTCGAGATCCTGGGATTCTCTTCAATCCTTGGCTTTTGCCACAT  699

seq1  TTAAATAGATGCCTTTCTCTGGAGACCTCAAAGTGCTATCACAGACAGTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAGATGCCTTTCTCTGGAGACCTCAAAGTGCTATCACAGACAGTA  749

seq1  TAGCATTTCTCCCTACAATATCCTTTCGCATTCCGCAGAGCCCAGGCGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTCTCCCTACAATATCCTTTCGCATTCCGCAGAGCCCAGGCGAT  799

seq1  TTATCAACGTCAGGGCTAAAGCTAATATGCTGTGTGCTCTCCTAGAATTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAACGTCAGGGCTAAAGCTAATATGCTGTGTGCTCTCCTAGAATTC  849