BAC Information

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BAC

Clone NameB6Ng01-174B01
Chromosome14 (Build37)
Map Location 11,004,119 - 11,150,146
singlet/doubletdoublet
Overlap geneFhit
Upstream geneLOC100041948, LOC100042415
Downstream geneLOC100041974, LOC667030, EG382843, LOC100042427
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174B01.bB6Ng01-174B01.g
ACCGA002246GA002247
length1,1511,082
definitionB6Ng01-174B01.b B6Ng01-174B01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,149,019 - 11,150,146)(11,004,119 - 11,005,181)
sequence
gaattccaagggcaggccagtcattcagtcagacaataattttgttccgg
ctacaagtgctattccctttgctggtgttggagctcaggtggtcaatcat
ttggccagtcttcaaaatgttctaggatcagtccacggtaccaagaaagc
taggcctattagcacattgctataataccagcacttggggggtcgaggga
ggagggtcagatgttcaaagccatatttgactacagagcgaagtcaatgt
gtggagtgtgtgaaatcctgtctcaaaatgccaaaaaagatacaacaata
gcagtagcaaaagcaacaacaaaagcatttaaatattaaatcatctggcc
aataccataagtgaatgttataatacaagagtgttggtctgagcggtagt
ataatgttgatgatgttatttcttaatcatggtattatagcaaaacaagt
tgtgaaagccagggttttcataaaggagagagcctctattttagagtcat
tggaaactattgcagctctgaagctgatagccctctgaactactggcttc
atgcgaggggttgaaaatttgtggaagtgatacaaagagctcttagattg
gtcaagtgcatcaaaacccttttatagatataatcccacaatgctcagta
aaagcttggcaccatcacagcatgactattatctgtccttgacagagata
agtgcagaaagcagaaacaaatgccagatgagactttgccgaaatacaga
ggagaacttatgttgctcaagagacaatgggtgaagagaataaaacataa
tataataataataataaaatataatatgttttagctaatgttgtttgtaa
aataatataaaccgaactacagtgggaagaagatagttcacagtggatta
tagagcgcagttctcccaattgcatagtaaacgaagagaggctatgttaa
gatctagtttacttagagtgagattgcattaaaatatgatggtgtactat
gtgtagaaactgcagaagccagaagtcagaaaatttgggttttcttatct
ttaaacctcctgttagcgtcttttcttttcctgagaaataagacaagtta
atgtttgatcagaaaatggctacattttttagcctgccagtaaggggtgc
t
gaattcactagaaggtaaaagcactgcaaattacattttagaaagcaatt
tcagccatatgttctaccttgaaaccaccaattccctttgaaccaatgtt
cattacaaactcttttcaacatctgcctaagagcaacacagcaccatgtt
ttcaagagctcaaaagggaatctaagctacacaataaagcacaaggggtt
gggggagggtcattaacaactgtcattgttaaagggaaatgctggtcagt
tttatgcattaaaacagcccatgcaaaacatatttgactaaataagataa
atagcagagctgatcttccatgaccaagtgtactttagagatgccgaaat
gcatctgacacattgaaatatgaagtcatcaaattttacagctggaaaag
cctcaccagatgaatcattctgacctctccagagaagaccaggcttcaag
aggtttgaagaatgggaccaaggtcagaggaaagctggtaccagagcttg
gccgcagtgtggatttaatttcattattccacacttttggtttctaaata
cctacaagcttgaatgcatcattaaatgagcacaatcaaaggttgttcct
aaagaaacaattgcacaagtaaatcagttttagtgaggggcaaacagcaa
catagaacatgcacagggcagggtctaaaggctcatgggaagattgccac
ttaatgttgcagccataagttttcaaaacatttctccttggttttctctt
ttgtcgtatggaggattctttagatccctctgcacagttagggtgtagca
gtaacagatgggatgatgtttttgtcagttcctcatacaagcaaaaataa
aaggcaggtgtttcattcagaagatgaactcctatctacttgcctcctcc
atacagagcccaagtcttttctaatttaccatgattttctccattggact
ccagaaactattggggtctactttgacaaactacagctataagtaaggga
ttggaccgcccaatctgctcctaacatatcacccctatttggatagactt
ctggaaattggtctccaaatggtttactctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_11149019_11150146
seq2: B6Ng01-174B01.b_23_1173 (reverse)

seq1  AGCA-CCCTTACT-GCA-GCT-AAAAATGTAGCCATTTTCTGATCAAACA  46
      |||| |||||||| ||| ||| ||||||||||||||||||||||||||||
seq2  AGCACCCCTTACTGGCAGGCTAAAAAATGTAGCCATTTTCTGATCAAACA  50

seq1  TT-ACTTGTCTTATTTCTCAG--AAAG-AAAGA-GCT-ACA-GAGGTTT-  88
      || ||||||||||||||||||  |||| ||||| ||| ||| ||||||| 
seq2  TTAACTTGTCTTATTTCTCAGGAAAAGAAAAGACGCTAACAGGAGGTTTA  100

seq1  AAGATA--GAAACCTA---TTTCTGACTTCT-GCTTCTGCAG-TTCTACA  131
      ||||||   ||||| |   |||||||||||| |||||||||| |||||||
seq2  AAGATAAGAAAACCCAAATTTTCTGACTTCTGGCTTCTGCAGTTTCTACA  150

seq1  CATAGTACA-CATCATA-TTTAATGC-ATCTCACTCCTAAGTAAACTAGA  178
      ||||||||| ||||||| |||||||| |||||||| ||||||||||||||
seq2  CATAGTACACCATCATATTTTAATGCAATCTCACT-CTAAGTAAACTAGA  199

seq1  TCTT-ACATAGCCTCTCTTCGTTTACTATGCATTGGGGAGAACTGCGCTC  227
      |||| ||||||||||||||||||||||||||| | |||||||||||||||
seq2  TCTTAACATAGCCTCTCTTCGTTTACTATGCAATTGGGAGAACTGCGCTC  249

seq1  TAT-ATCCACTGTGAACTATCTTCTT-CCACTGTAGTTCGGTTTTATATT  275
      ||| |||||||||||||||||||||| |||||||||||||| ||||||||
seq2  TATAATCCACTGTGAACTATCTTCTTCCCACTGTAGTTCGG-TTTATATT  298

seq1  ATTTTACAAACAACATTAGCTAAAACATATTATATTTTATTATTATTATT  325
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACAAACAACATTAGCTAAAACATATTATATTTTATTATTATTATT  348

seq1  ATATTATGTTTTATTCTCTTCACCCATTGTCTCTTGAGCAACATAAGTTC  375
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATGTTTTATTCTCTTCACCCATTGTCTCTTGAGCAACATAAGTTC  398

seq1  TCCTCTGTATTTCGGCAAAGTCTCATCTGGCATTTGTTTCTGCTTTCTGC  425
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTATTTCGGCAAAGTCTCATCTGGCATTTGTTTCTGCTTTCTGC  448

seq1  ACTTATCTCTGTCAAGGACAGATAATAGTCATGCTGTGATGGTGCCAAGC  475
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATCTCTGTCAAGGACAGATAATAGTCATGCTGTGATGGTGCCAAGC  498

seq1  TTTTACTGAGCATTGTGGGATTATATCTATAAAAGGGTTTTGATGCACTT  525
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTGAGCATTGTGGGATTATATCTATAAAAGGGTTTTGATGCACTT  548

seq1  GACCAATCTAAGAGCTCTTTGTATCACTTCCACAAATTTTCAACCCCTCG  575
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATCTAAGAGCTCTTTGTATCACTTCCACAAATTTTCAACCCCTCG  598

seq1  CATGAAGCCAGTAGTTCAGAGGGCTATCAGCTTCAGAGCTGCAATAGTTT  625
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGCCAGTAGTTCAGAGGGCTATCAGCTTCAGAGCTGCAATAGTTT  648

seq1  CCAATGACTCTAAAATAGAGGCTCTCTCCTTTATGAAAACCCTGGCTTTC  675
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGACTCTAAAATAGAGGCTCTCTCCTTTATGAAAACCCTGGCTTTC  698

seq1  ACAACTTGTTTTGCTATAATACCATGATTAAGAAATAACATCATCAACAT  725
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGTTTTGCTATAATACCATGATTAAGAAATAACATCATCAACAT  748

seq1  TATACTACCGCTCAGACCAACACTCTTGTATTATAACATTCACTTATGGT  775
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTACCGCTCAGACCAACACTCTTGTATTATAACATTCACTTATGGT  798

seq1  ATTGGCCAGATGATTTAATATTTAAATGCTTTTGTTGTTGCTTTTGCTAC  825
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCAGATGATTTAATATTTAAATGCTTTTGTTGTTGCTTTTGCTAC  848

seq1  TGCTATTGTTGTATCTTTTTTGGCATTTTGAGACAGGATTTCACACACTC  875
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTGTTGTATCTTTTTTGGCATTTTGAGACAGGATTTCACACACTC  898

seq1  CACACATTGACTTCGCTCTGTAGTCAAATATGGCTTTGAACATCTGACCC  925
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATTGACTTCGCTCTGTAGTCAAATATGGCTTTGAACATCTGACCC  948

seq1  TCCTCCCTCGACCCCCCAAGTGCTGGTATTATAGCAATGTGCTAATAGGC  975
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTCGACCCCCCAAGTGCTGGTATTATAGCAATGTGCTAATAGGC  998

seq1  CTAGCTTTCTTGGTACCGTGGACTGATCCTAGAACATTTTGAAGACTGGC  1025
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTTTCTTGGTACCGTGGACTGATCCTAGAACATTTTGAAGACTGGC  1048

seq1  CAAATGATTGACCACCTGAGCTCCAACACCAGCAAAGGGAATAGCACTTG  1075
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGATTGACCACCTGAGCTCCAACACCAGCAAAGGGAATAGCACTTG  1098

seq1  TAGCCGGAATAAAATTATTGTCTGACTGAATGACTGGCCTGCCCTTGGAA  1125
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCGGAACAAAATTATTGTCTGACTGAATGACTGGCCTGCCCTTGGAA  1148

seq1  TTC  1128
      |||
seq2  TTC  1151

seq1: chr14_11004119_11005181
seq2: B6Ng01-174B01.g_67_1148

seq1  GAATTCACTAGAAGGTAAAAGCACTGCAAATTACATTTTAGAAAGCAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAGAAGGTAAAAGCACTGCAAATTACATTTTAGAAAGCAATT  50

seq1  TCAGCCATATGTTCTACCTTGAAACCACCAATTCCCTTTGAACCAATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCATATGTTCTACCTTGAAACCACCAATTCCCTTTGAACCAATGTT  100

seq1  CATTACAAACTCTTTTCAACATCTGCCTAAGAGCAACACAGCACCATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAAACTCTTTTCAACATCTGCCTAAGAGCAACACAGCACCATGTT  150

seq1  TTCAAGAGCTCAAAAGGGAATCTAAGCTACACAATAAAGCACAAGGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAGCTCAAAAGGGAATCTAAGCTACACAATAAAGCACAAGGGGTT  200

seq1  GGGGGAGGGTCATTAACAACTGTCATTGTTAAAGGGAAATGCTGGTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGGGTCATTAACAACTGTCATTGTTAAAGGGAAATGCTGGTCAGT  250

seq1  TTTATGCATTAAAACAGCCCATGCAAAACATATTTGACTAAATAAGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCATTAAAACAGCCCATGCAAAACATATTTGACTAAATAAGATAA  300

seq1  ATAGCAGAGCTGATCTTCCATGACCAAGTGTACTTTAGAGATGCCGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGAGCTGATCTTCCATGACCAAGTGTACTTTAGAGATGCCGAAAT  350

seq1  GCATCTGACACATTGAAATATGAAGTCATCAAATTTTACAGCTGGAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGACACATTGAAATATGAAGTCATCAAATTTTACAGCTGGAAAAG  400

seq1  CCTCACCAGATGAATCATTCTGACCTCTCCAGAGAAGACCAGGCTTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCAGATGAATCATTCTGACCTCTCCAGAGAAGACCAGGCTTCAAG  450

seq1  AGGTTTGAAGAATGGGACCAAGGTCAGAGGAAAGCTGGTACCAGAGCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGAAGAATGGGACCAAGGTCAGAGGAAAGCTGGTACCAGAGCTTG  500

seq1  GCCGCAGTGTGGATTTAATTTCATTATTCCACACTTTTGGTTTCTAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCAGTGTGGATTTAATTTCATTATTCCACACTTTTGGTTTCTAAATA  550

seq1  CCTACAAGCTTGAATGCATCATTAAATGAGCACAATCAAAGGTTGTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAAGCTTGAATGCATCATTAAATGAGCACAATCAAAGGTTGTTCCT  600

seq1  AAAGAAACAATTGCACAAGTAAATCAGTTTTAGTGAGGGGCAAACAGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACAATTGCACAAGTAAATCAGTTTTAGTGAGGGGCAAACAGCAA  650

seq1  CATAGAACATGCACAGGGCAGGGTCTAAAGGCTCATGGGAAGATTGCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAACATGCACAGGGCAGGGTCTAAAGGCTCATGGGAAGATTGCCAC  700

seq1  TTAATGTTGCAGCCATAAG-TTTCAAAACATTTCTCCTTGGTTTTCTCTT  749
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTAATGTTGCAGCCATAAGTTTTCAAAACATTTCTCCTTGGTTTTCTCTT  750

seq1  TTGTCGTATGGAGGATTC-TTAGATCCCTCTGCACAGTTAGGGTGTAGCA  798
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTGTCGTATGGAGGATTCTTTAGATCCCTCTGCACAGTTAGGGTGTAGCA  800

seq1  GTAACAGATGGGATGATG-TTTTGTCAGTTCCTCATACAAGCAAAAATAA  847
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTAACAGATGGGATGATGTTTTTGTCAGTTCCTCATACAAGCAAAAATAA  850

seq1  AAGGCAGGTGTTTCA-TCAGAAGATGAACTCCTATCTACCTGCCTCCTCC  896
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  AAGGCAGGTGTTTCATTCAGAAGATGAACTCCTATCTACTTGCCTCCTCC  900

seq1  A-ACAGAGCCC-AGTCTTTCCTAATTTACCATGATTTTCTCCATT-GACT  943
      | ||||||||| ||||||| ||||||||||||||||||||||||| ||||
seq2  ATACAGAGCCCAAGTCTTTTCTAATTTACCATGATTTTCTCCATTGGACT  950

seq1  -CAGAAACTAT--GGGTCTACTTGTACAAACTACAGCTATA---GAAGGA  987
       ||||||||||  ||||||||||  ||||||||||||||||    | |||
seq2  CCAGAAACTATTGGGGTCTACTTTGACAAACTACAGCTATAAGTAAGGGA  1000

seq1  TTTGAACGCCC-ATCTGCTCCT-ACATATCAACCCTATT--GATAGACTT  1033
      || || ||||| |||||||||| |||||||| |||||||  |||||||||
seq2  TTGGACCGCCCAATCTGCTCCTAACATATCACCCCTATTTGGATAGACTT  1050

seq1  CTGG--AGTTGTCTCCAAAATGTTTACTCTAT  1063
      ||||  | | |||||||||  |||||||||||
seq2  CTGGAAATTGGTCTCCAAATGGTTTACTCTAT  1082