BAC Information

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BAC

Clone NameB6Ng01-174M04
Chromosome14 (Build37)
Map Location 26,875,842 - 27,110,210
singlet/doubletdoublet
Overlap geneLOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527
Upstream geneLOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175
Downstream geneLOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174M04.bB6Ng01-174M04.g
ACCGA002747GA002748
length318927
definitionB6Ng01-174M04.b B6Ng01-174M04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,109,893 - 27,110,210)(26,875,842 - 26,876,762)
sequence
ctgcacattatcctgaattcagtttttctttcttttcttttcttttcttt
tcttttcttttcttttctttcctctttctttctttctttctttcttcctt
cctttctttctttcttttttttttttttttttggtttttcgagccagggt
ttctctgggcaaccctgactgtcctggaactcactctgtagaccaggctg
ggctcgaactcagaaatccacctgcctctgcctcccgagtgctgggatta
aaagcatgtgtcaccactgcccagctcagatttgcttctctatcttacca
gccagaaaattacattcc
gaattctttggggccatcctcctcacagtgaggactggaggttccgaaca
ctgtatggacatgcagaggagagtcctgggcatccttacttctaccccag
gagtctcagagctactaatatgaacttggactagtgtcttagactcagtc
acatcagcctagtcatcccaaactgcatgtctgacctagcctctcttcct
cattctgaaggtttaactcctaatgtgagaaaccagaatcatcattggag
tcacctacaaagtcccaggggacagtgcacagtggtcactcagtactcaa
gtcaagttggtacttactttcctgctggatgccatttcaaagaggcatct
caaagggctctttgttgtgggaaactctgctaattaaggtcaaagtctac
cattgattggatagccttctggggcttggcaagtaatgggggaatccctt
tattatcggggcttctccttctctgaccttgtctagggaattctaagccc
acacatatgcctctaccagaggaatgccacatagcctcaattagattaca
ggatcaatttcctttctcctgattaagacctattcagctagctcctatga
ttcctgaaatactttcccatgctaatgaggcattttagtaccctaagcct
ttcagtctgccaacactgtataagccttgactcaccctacataaaggtga
tctgcatcctgatgggtggtccagatgtggtcactggcccatacacactc
agcccccaacccatcatctctgctcccttttcctgcatgaatcgtatcag
ctgacaattcacaaaagtagggagaaccacactttgtttctaagcagtgg
aataattttcttaaaagagaattgggatagtggagtctacttcagacatg
actttcgtagaaaaatcacatttcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_27109893_27110210
seq2: B6Ng01-174M04.b_39_356 (reverse)

seq1  GGAATGTAATTTTCTGGCTGGTAAGATAGAGAAGCAAATCTGAGCTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTAATTTTCTGGCTGGTAAGATAGAGAAGCAAATCTGAGCTGGGC  50

seq1  AGTGGTGACACATGCTTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGACACATGCTTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTG  100

seq1  GATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAG  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GATTTCTGAGTTCGAGCCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAG  150

seq1  TCAGGGTTGCACAGAGAAACCCTGGCTCGAAAAACCAAAAAAAAAAAAAA  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTTGCCCAGAGAAACCCTGGCTCGAAAAACCAAAAAAAAAAAAAA  200

seq1  AAAAGAAAGAAAGAAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGAAAGAAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAGGAA  250

seq1  AGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAACTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAACTGA  300

seq1  ATTCAGGATAATGTGCAG  318
      ||||||||||||||||||
seq2  ATTCAGGATAATGTGCAG  318

seq1: chr14_26875842_26876762
seq2: B6Ng01-174M04.g_69_995

seq1  GAATTCTTTGGGGCCATCCTCCTCACAGTGAGGACTGGAGGTTCCGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGGGCCATCCTCCTCACAGTGAGGACTGGAGGTTCCGAACA  50

seq1  CTGTATGGACATGCAGAGGAGAGTCCTGGGCATCCTTACTTCTACCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGGACATGCAGAGGAGAGTCCTGGGCATCCTTACTTCTACCCCAG  100

seq1  GAGTCTCAGAGCTACTAATATGAACTTGGACTAGTGTCTTAGACTCAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCAGAGCTACTAATATGAACTTGGACTAGTGTCTTAGACTCAGTC  150

seq1  ACATCAGCCTAGTCATCCCAAACTGCATGTCTGACCTAGCCTCTCTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGCCTAGTCATCCCAAACTGCATGTCTGACCTAGCCTCTCTTCCT  200

seq1  CATTCTGAAGGTTTAACTCCTAATGTGAGAAACCAGAATCATCATTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGAAGGTTTAACTCCTAATGTGAGAAACCAGAATCATCATTGGAG  250

seq1  TCACCTACAAAGTCCCAGGGGACAGTGCACAGTGGTCACTCAGTACTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTACAAAGTCCCAGGGGACAGTGCACAGTGGTCACTCAGTACTCAA  300

seq1  GTCAAGTTGGTACTTACTTTCCTGCTGGATGCCATTTCAAAGAGGCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTTGGTACTTACTTTCCTGCTGGATGCCATTTCAAAGAGGCATCT  350

seq1  CAAAGGGCTCTTTGTTGTGGGAAACTCTGCTAATTAAGGTCAAAGTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGCTCTTTGTTGTGGGAAACTCTGCTAATTAAGGTCAAAGTCTAC  400

seq1  CATTGATTGGATAGCCTTCTGGGGCTTGGCAAGTAATGGGGGAATCCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTGGATAGCCTTCTGGGGCTTGGCAAGTAATGGGGGAATCCCTT  450

seq1  TATTATCGGGGCTTCTCCTTCTCTGACCTTGTCTAGGGAATTCTAAGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCGGGGCTTCTCCTTCTCTGACCTTGTCTAGGGAATTCTAAGCCC  500

seq1  ACACATATGCCTCTACCAGAGGAATGCCACATAGCCTCAATTAGATTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATGCCTCTACCAGAGGAATGCCACATAGCCTCAATTAGATTACA  550

seq1  GGATCAATTTCCTTTCTCCTGATTAAGACCTATTCAGCTAGCTCCTATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAATTTCCTTTCTCCTGATTAAGACCTATTCAGCTAGCTCCTATGA  600

seq1  TTCCTGAAATACTTTCCCATGCTAATGAGGCATTTTAGTACCCTAAGCC-  649
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTCCTGAAATACTTTCCCATGCTAATGAGGCATTTTAGTACCCTAAGCCT  650

seq1  TTCAGTCTGCCAACACTGTATAAGCCTTGACTCACCCTACATAAAGGTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCTGCCAACACTGTATAAGCCTTGACTCACCCTACATAAAGGTGA  700

seq1  TCTGCATCCTGATGGGTGGTCCAGATGTGGTCACTGG-CCATACACACTC  748
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTGCATCCTGATGGGTGGTCCAGATGTGGTCACTGGCCCATACACACTC  750

seq1  AGCCCCCAACCCATCATCTCTGCTCCCTTTTCCTGCATGAATCGTATCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCAACCCATCATCTCTGCTCCCTTTTCCTGCATGAATCGTATCAG  800

seq1  CTGACAATCCACAAAAGTAGGGAGAACCACACTTTG-TTCTAAGCAGTGG  847
      |||||||| ||||||||||||||||||||||||||| |||||||||||||
seq2  CTGACAATTCACAAAAGTAGGGAGAACCACACTTTGTTTCTAAGCAGTGG  850

seq1  AATAATTTTCATAAAAG-GAATT-GGATAGTGGAGTCTACTTCAGACATG  895
      |||||||||| |||||| ||||| ||||||||||||||||||||||||||
seq2  AATAATTTTCTTAAAAGAGAATTGGGATAGTGGAGTCTACTTCAGACATG  900

seq1  ACTTTCGTAGAAAAA-CACATTTCACT  921
      ||||||||||||||| |||||||||||
seq2  ACTTTCGTAGAAAAATCACATTTCACT  927