BAC Information

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BAC

Clone NameB6Ng01-175J12
Chromosome14 (Build37)
Map Location 82,291,225 - 82,292,372
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175J12.bB6Ng01-175J12.g
ACCGA003357GA003358
length1,1401,194
definitionB6Ng01-175J12.b B6Ng01-175J12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaaaaatcttctgtaccaagaaatgttttactgctagattta
catatttgtgataagtcaaattcgtgaggtcaaaaggatttgagtcccta
gtactacatacaaactctgttatatttgatagaaaaagacttacatttaa
tatttcttacaatagtaagtcaatcaaacacatgtaatggacccctgaac
acacacaaaagtatgagtccataaaagtgaaagtattgagaataattaaa
atacagaaagaaaaaataaattgtaagaggttgtgacattttttcagtat
tgtgctgttcttcaagaaaccaggatgattggtgcttttgatttttacaa
agagaataataaatgcacatgcaaaatatggaagtttcttaagtaaaaat
tacaaaaaatttacatttcaaatttcatcagtagttattgcctgggtatg
tcttataaaaaatgaatggctctatgtctccttttagaacaaaatatgct
cacattttttctacaatctgaaactacaggaaataactttttttaaatgc
aacacttgtcacaatgtattaaattgcactattttatacttaagtaggtt
aaccttcacatacccagtttgaccacaaataaatataactacagtttaag
aattcttcatgtttgtacgttataagttgaaaatggggcacatattgcag
ttgtaaatgtgcattaaaaggaaacaaatattcactgggtacatttttaa
aaaatagaaattgctttttaaaaatctgtattgtattttctagggtgaaa
aaactggaaatttggcaaacatgttgtatgatgtctaattgacttcataa
ctaagttttcaaatgtttaatatgagtctttatttgaggtcaaataaaat
tactggctcacaattttcttgggaaaccttcagaaatgatttgatctcat
atgcattttgtatgataaaaagtgaggaaactataattttgaactgagca
ttgaacattaggacaaattgaacatttaggactaatccaagagtgaagtc
ggtcattagagtgcctcattataattaacagaaggcatcagacaaaataa
ccaacaggaactaaacctaccacagaaccaaggttgccag

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcataatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtatgaaggacacatgctcctctat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaccacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattgggatggatcacatggtccca
atgaaggagctagaagaaagtaccaaagaagctaaagggatctgcaaccc
tataggtggaacacatatgaactaaccagtaccccggagctcttgactct
agctgcaatatgcatcaaaagatgactagtcgcatcacttgtaagaagga
gccaattgaacgcaacttatatgccaagtaaggaacgctgtccataaagc
atgtggggtgtgaataacggcgctagcatacgtgccttactact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82291225_82292372
seq2: B6Ng01-175J12.b_47_1186

seq1  GAATTCAGTAAAAATCTTCTGTACCAAGAAATGTTTTACTGCTAGATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAAAATCTTCTGTACCAAGAAATGTTTTACTGCTAGATTTA  50

seq1  CATATTTGTGATAAGTCAAATTCGTGAGGTCAAAAGGATTTGAGTCCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTGTGATAAGTCAAATTCGTGAGGTCAAAAGGATTTGAGTCCCTA  100

seq1  GTACTACATACAAACTCTGTTATATTTGATAGAAAAAGACTTACATTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACATACAAACTCTGTTATATTTGATAGAAAAAGACTTACATTTAA  150

seq1  TATTTCTTACAATAGTAAGTCAATCAAACACATGTAATGGACCCCTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTACAATAGTAAGTCAATCAAACACATGTAATGGACCCCTGAAC  200

seq1  ACACACAAAAGTATGAGTCCATAAAAGTGAAAGTATTGAGAATAATTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAAAAGTATGAGTCCATAAAAGTGAAAGTATTGAGAATAATTAAA  250

seq1  ATACAGAAAGAAAAAATAAATTGTAAGAGGTTGTGACATTTTTTCAGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAAAGAAAAAATAAATTGTAAGAGGTTGTGACATTTTTTCAGTAT  300

seq1  TGTGCTGTTCTTCAAGAAACCAGGATGATTGGTGCTTTTGATTTTTACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGTTCTTCAAGAAACCAGGATGATTGGTGCTTTTGATTTTTACAA  350

seq1  AGAGAATAATAAATGCACATGCAAAATATGGAAGTTTCTTAAGTAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATAATAAATGCACATGCAAAATATGGAAGTTTCTTAAGTAAAAAT  400

seq1  TACAAAAAATTTACATTTCAAATTTCATCAGTAGTTATTGCCTGGGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAAATTTACATTTCAAATTTCATCAGTAGTTATTGCCTGGGTATG  450

seq1  TCTTATAAAAAATGAATGGCTCTATGTCTCCTTTTAGAACAAAATATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAAAAAATGAATGGCTCTATGTCTCCTTTTAGAACAAAATATGCT  500

seq1  CACATTTTTTCTACAATCTGAAACTACAGGAAATAACTTTTTTTAAATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTTTCTACAATCTGAAACTACAGGAAATAACTTTTTTTAAATGC  550

seq1  AACACTTGTCACAATGTATTAAATTGCACTATTTTATACTTAAGTAGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTGTCACAATGTATTAAATTGCACTATTTTATACTTAAGTAGGTT  600

seq1  AACCTTCACATACCCAGTTTGACCACAAATAAATATAACTACAGTTTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCACATACCCAGTTTGACCACAAATAAATATAACTACAGTTTAAG  650

seq1  AATTCTTCATGTTTGTACGTTATAAGTTGAAAATGGGGCACATATTGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTCATGTTTGTACGTTATAAGTTGAAAATGGGGCACATATTGCAG  700

seq1  TTGTAAATGTGCATTAAAAGGAAACAAATATTCACTGGGTACATTTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAATGTGCATTAAAAGGAAACAAATATTCACTGGGTACATTTTTAA  750

seq1  AAAATAGAAATTGCTTTTTAAAAATCTGTATTGTATTTTCTAGGGTGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAAATTGCTTTTTAAAAATCTGTATTGTATTTTCTAGGGTGAAA  800

seq1  AAACTGGAAATTTGGCAAACATGTTGTATGATGTCTAATTGACTTCATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAAATTTGGCAAACATGTTGTATGATGTCTAATTGACTTCATAA  850

seq1  CTAAGTTTTCAAATGTTTAATATGAGTCTTTATTTGAGGTCAAATAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTTTCAAATGTTTAATATGAGTCTTTATTTGAGGTCAAATAAAAT  900

seq1  TACTGGCTCACAA-TTTCTT-GGAAACCTTCAGAAATGATTTGATCTCAT  948
      ||||||||||||| |||||| |||||||||||||||||||||||||||||
seq2  TACTGGCTCACAATTTTCTTGGGAAACCTTCAGAAATGATTTGATCTCAT  950

seq1  ATGCATTTTGTATGAT-AAAAGTGAGGAAACTATAATTTTGAACTGAGCA  997
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATGCATTTTGTATGATAAAAAGTGAGGAAACTATAATTTTGAACTGAGCA  1000

seq1  TTTGAACATTAGGACAAATTTGAACA-TTAGGACTAATCCAAGAGTGAAG  1046
       ||||||||||||||||| ||||||| |||||||||||||||||||||||
seq2  -TTGAACATTAGGACAAA-TTGAACATTTAGGACTAATCCAAGAGTGAAG  1048

seq1  TCGGTCATTAAGAGTGCCTCATAATAAATAACAGAAGCAATCAAAGAACA  1096
      ||||||||| |||||||||||| |||| |||||||||  ||||    |||
seq2  TCGGTCATT-AGAGTGCCTCATTATAATTAACAGAAGGCATCA---GACA  1094

seq1  AAAATAAACAAACAGGAACAAAAACCCAAACCAACAGAACCCAGGTTGCC  1146
      |||   ||| ||||||||| |||  || |  | |||||||| ||||||||
seq2  AAA--TAACCAACAGGAACTAAA--CCTA--CCACAGAACCAAGGTTGCC  1138

seq1  AG  1148
      ||
seq2  AG  1140


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