BAC Information

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BAC

Clone NameB6Ng01-178E16
Chromosome14 (Build37)
Map Location 81,727,951 - 81,729,161
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC672828
Downstream geneLOC639207
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178E16.bB6Ng01-178E16.g
ACCGA005326GA005327
length8211,200
definitionB6Ng01-178E16.b B6Ng01-178E16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacatcaaaccagatacactgaatttaatagaagattaaattgg
aaatagctttgaatgcattggtgcaggagacaatggctcggggtctaaaa
tcaaaaaatgataaatgggaccacaggacactgtcaataggacaaaaggg
cagggtacatattgggaaacgatcttccctaaccctacacctgacagagg
gccaatatacaaaatatatgaagaactcaagaagttagattccaaaaaaa
ttgaataaataaataaataaataaataaataaaatggggtatagagtcaa
attgagaaccttaaacagattaatctcaaatgcatgagaagcatttaaag
taatgtgcaacatccttcatcatcaggaaaatgtaaatcaaaacaaccca
gagatttctccttataacaatcagactggctaagatgaacatgctcaaga
atatgtgaaaaaagggaacactactggtgagattcaaacttgtaaaacca
ctctcagaatcaatctggtagcttctccaaaaattggaaagaattttgtc
tgaagatgtagctatacagctcctagagcgtatacccagaagatcctcca
ccataccacaaggatacattctccattatgttcatcacagctttttttgc
aatagctacacactcaatcaaacatagatgtccgtcaactgaacaaggtg
atggatacaaaaaaaaaatgtggtacatttactgaatgaaatactgaaag
aaaaaaggatagaaagaaagaagagcaaaggaaaggagaggagaggagag
gagaggagaggagaggagagg

gaattctcagcttgtggagtttatgctttccgcaaagagataatggatct
tgaattaactctactgaaagaagcatggggaagaagagtttacaagagtg
aagcatatttgaaggaaggacaggtagaggagaaatgggataaaagcctg
catcttaccactggagaagaaagcagtgtgttttagctcaagctttgatg
ggattgccaagccaaattttccatcttttcataaagaacattggattata
ggcattatttttcatgcagtggaactcttgttttaaacgagtataggatg
tacaatgtatatattaaatatggcattacagctaataggaaatacaaaaa
ttaaaataacagcttactttgtattaatccatccatgactctttcaggtc
agtgtaaagaccaatatcttgttgcaggcttctgttttgttgctgcagta
aggggcagaggcccaactctagtactccctatgccagctcacacaactga
ctgaagaaattccctttccccttggagatctcaattcagagaaaaaggat
tcatggcttcaagggaaaatgagtttcagatcttgccaatatgaagcaaa
agtgtattttctaaaagcagagcaaaagggactcagaaaaaagaaaatat
atctggtggcaagagtgagggcttctcaagggagagtctttacaatgaac
atataggatctctgctaatgtctctaaaggctcctaagaccagcctccta
tgtgcagttttaagcattgctaagggatgaagtttacaacaaggttaaaa
gtaaagacgtttttcttctacaaacaaaattgtacggtagatttatgtga
gttattgcttagattaatagagagaagggagtcattgatactgaaaggct
gtctattatctttgacttttagtaaacctgatttatttgctgtctttgac
tagatgtctttgtaaatcccattgtcagtgagaaattttgcctggtgcca
gaatttccttactggcagcagtcagcagagtccttcttcatgtttgctgt
tgcattttttttcttcttataatccacttattcattgctcttaggtctat
cttgttttcttccagtttgaacttgaggatcagactaagctatggagata
gaactgggtgttaatcttctggactcctccaatgaggcctgcgtggataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_81727951_81729161
seq2: B6Ng01-178E16.g_66_1265

seq1  GAATTCTCAGCTTGTGGAGTTTATGCTTTCCGCAAAGAGATAATGGATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCTTGTGGAGTTTATGCTTTCCGCAAAGAGATAATGGATCT  50

seq1  TGAATTAACTCTACTGAAAGAAGCATGGGGAAGAAGAGTTTACAAGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAACTCTACTGAAAGAAGCATGGGGAAGAAGAGTTTACAAGAGTG  100

seq1  AAGCATATTTGAAGGAAGGACAGGTAGAGGAGAAATGGGATAAAAGCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATATTTGAAGGAAGGACAGGTAGAGGAGAAATGGGATAAAAGCCTG  150

seq1  CATCTTACCACTGGAGAAGAAAGCAGTGTGTTTTAGCTCAAGCTTTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTACCACTGGAGAAGAAAGCAGTGTGTTTTAGCTCAAGCTTTGATG  200

seq1  GGATTGCCAAGCCAAATTTTCCATCTTTTCATAAAGAACATTGGATTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCCAAGCCAAATTTTCCATCTTTTCATAAAGAACATTGGATTATA  250

seq1  GGCATTATTTTTCATGCAGTGGAACTCTTGTTTTAAACGAGTATAGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTATTTTTCATGCAGTGGAACTCTTGTTTTAAACGAGTATAGGATG  300

seq1  TACAATGTATATATTAAATATGGCATTACAGCTAATAGGAAATACAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGTATATATTAAATATGGCATTACAGCTAATAGGAAATACAAAAA  350

seq1  TTAAAATAACAGCTTACTTTGTATTAATCCATCCATGACTCTTTCAGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAACAGCTTACTTTGTATTAATCCATCCATGACTCTTTCAGGTC  400

seq1  AGTGTAAAGACCAATATCTTGTTGCAGGCTTCTGTTTTGTTGCTGCAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAAAGACCAATATCTTGTTGCAGGCTTCTGTTTTGTTGCTGCAGTA  450

seq1  AGGGGCAGAGGCCCAACTCTAGTACTCCCTATGCCAGCTCACACAACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCAGAGGCCCAACTCTAGTACTCCCTATGCCAGCTCACACAACTGA  500

seq1  CTGAAGAAATTCCCTTTCCCCTTGGAGATCTCAATTCAGAGAAAAAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAAATTCCCTTTCCCCTTGGAGATCTCAATTCAGAGAAAAAGGAT  550

seq1  TCATGGCTTCAAGGGAAAATGAGTTTCAGATCTTGCCAATATGAAGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCTTCAAGGGAAAATGAGTTTCAGATCTTGCCAATATGAAGCAAA  600

seq1  AGTGTATTTTCTAAAAGCAGAGCAAAAGGGACTCAGAAAAAAGAAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATTTTCTAAAAGCAGAGCAAAAGGGACTCAGAAAAAAGAAAATAT  650

seq1  ATCTGGTGGCAAGAGTGAGGGCTTCTCAAGGGAGAGTCTTTACAATGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTGGCAAGAGTGAGGGCTTCTCAAGGGAGAGTCTTTACAATGAAC  700

seq1  ATATAGGATCTCTGCTAATGTCTCTAAAGGCTCCTAAGACCAGCCTCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGATCTCTGCTAATGTCTCTAAAGGCTCCTAAGACCAGCCTCCTA  750

seq1  TGTGCAGTTTTAAGCATTGCTAAGGGATGAAGTTTACAACAAGGTTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGTTTTAAGCATTGCTAAGGGATGAAGTTTACAACAAGGTTAAAA  800

seq1  GTAAAGACGTTTTTCTTCTACAAACAAAATTGTACGGTAGATTTATGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGACGTTTTTCTTCTACAAACAAAATTGTACGGTAGATTTATGTGA  850

seq1  GTTATTGCTTAGATTAATAGAGAGAAGGGAGTCATTGATACTG-AAGGCT  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTTATTGCTTAGATTAATAGAGAGAAGGGAGTCATTGATACTGAAAGGCT  900

seq1  GTCTATTATCTTTGACTTTTAGTAAACCTGATTTATTTGCTGTCTTTGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTATCTTTGACTTTTAGTAAACCTGATTTATTTGCTGTCTTTGAC  950

seq1  TAGATGTCTTTGTAAAATCCCATTGTTCAGTGAGAAATTTTGCCTGGTGC  999
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  TAGATGTCTTTGT-AAATCCCATTG-TCAGTGAGAAATTTTGCCTGGTGC  998

seq1  CAGAAATTTCCTTACTGGCAGCAGGTCAGCAAGAGTCCTTCTTCATGTTT  1049
      ||| ||||||||||||||||||| |||||| |||||||||||||||||||
seq2  CAG-AATTTCCTTACTGGCAGCA-GTCAGC-AGAGTCCTTCTTCATGTTT  1045

seq1  TGGCTTGTTTTGCATTTTTTTTCCTTCTTAT-ATCCACTTAATCATTTGC  1098
        ||   | ||||||||||||| |||||||| ||||||||| |||||   
seq2  --GC---TGTTGCATTTTTTTT-CTTCTTATAATCCACTTATTCATT--G  1087

seq1  CTCTTA-GTCTATC-TGTTTTCTTTCAGTTTGACTTTGAAGGAATCAGAC  1146
      |||||| ||||||| ||||||||| ||||||||  ||||  | |||||||
seq2  CTCTTAGGTCTATCTTGTTTTCTTCCAGTTTGAACTTGA--GGATCAGAC  1135

seq1  TAGGTTATGGAGTATAGAACTGTGGTG-TAATCTTCCTGACTCCTCCCAA  1195
      || | ||||||| ||||||||| |||| ||||||||  ||||||| ||||
seq2  TAAGCTATGGAG-ATAGAACTG-GGTGTTAATCTTCTGGACTCCT-CCAA  1182

seq1  TGAGG-CTG-GTGGATAA  1211
      ||||| ||| ||||||||
seq2  TGAGGCCTGCGTGGATAA  1200


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