BAC Information

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BAC

Clone NameB6Ng01-178I22
Chromosome14 (Build37)
Map Location 87,530,151 - 87,531,323
singlet/doubletsinglet
Overlap geneDiap3
Upstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311
Downstream geneEG665324, Tdrd3, LOC100043317, LOC100043780
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178I22.bB6Ng01-178I22.g
ACCGA005513GA005514
length1,163239
definitionB6Ng01-178I22.b B6Ng01-178I22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattcatgatgacaattacaattcatttttaatgaataatttga
cagccagagaaatgaatataaaaaatggagtacatataatctacatccag
aaattcaacgtgacaggttcacttctttataaagggtgaaggtctccaat
taaaaccatgttctaacttcactcagcctcccgtcaaaaggtgttttgct
cttactgataatgttaccttcaataagctttcagtccctttatgcatatg
ctcgtaaggctgcctgagggtcagttttactgtggtgcctagtaaaggct
tagagaatctgaatgcttgcctaactgaggagccaagttactctaggaac
tttataccacttggtttcttcagtcattcaagattaatgtaagctgaaat
ggaatttagatatcccacatgtctgtttccttttatgaaatggtctaggg
gtattgggcaaaggcatgtaaaaactaccaggagttttcaggattggcat
gtctatgccccagccataaccactgggacagtttaggtttaagctggaaa
tgctatcccgaaagttccctatatcccccccctccccattcttaatctgt
gtgcaagcttctagtttcctagaggtaaagtggaaatggccactgtatgt
gggtgttgtgagcattggttggaattattaccacaggttagacagagtgc
ttcccagtgcagatgtggcccctgttagtagttctactggggctgcactt
ttcaggggcacatcaaagtctcggaggcctcattcagcgctgtgaaacgc
agtctgtgtgcaggactgcttatgtgggaggttctctgaggagctctgct
agtgagcattttgattttttactttctccctttgtctcctctcattacgt
ctttcctgccagacacaggttattgtgtccaggaaacttccgctcttcat
tggagagggacacgtatcctgaaatttggccctgaatgcatttttttcct
tttcttcttaatctcggctttagccctgacttgcctcttttccttccgtg
cccatcctgcgtcacatttgctcttactaaacctacttcaccaagtaccc
caggagcctttccttgatccaggtcttcaccttccttgcttctgcagccc
tcatgtatgatga

cattacagatgtttgtgggccatcatgtgtttactgggaactgaactcat
gacctccggaagaacagtcactgttaactgctaagccaagagccaccgac
cagacagcattcaggagctgatctgaggccccctacacatatacaacaga
ggactgcctggtctggcttcagagggagaagacacgcctaaccctcaaga
gacttgaggccccaaggagtggggaggtttgggaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_87530151_87531323
seq2: B6Ng01-178I22.b_41_1203 (reverse)

seq1  TCATCATACATGA-GGCTGCAGGAAGCAAAGAAAGTGAAGGCACCCTGGA  49
      ||||||||||||| ||||||| ||||||| ||| ||||||    ||||||
seq2  TCATCATACATGAGGGCTGCA-GAAGCAAGGAAGGTGAAG---ACCTGGA  46

seq1  TCAAAGAAA-GCTCTGGGGTTACCTTTGTGGAGTAGGGGTTTAGTAAGAA  98
      |||| |||| ||||  ||| || ||| ||| ||||  ||||||||||| |
seq2  TCAAGGAAAGGCTCCTGGGGTA-CTTGGTGAAGTA--GGTTTAGTAAG-A  92

seq1  GCAAATGTTGACGGCAGAATTGGGCACGGAAGGAAAAAGAGGCAAGGTCA  148
      ||||||| |||| |||| | ||||||||||||| ||||||||||| ||||
seq2  GCAAATG-TGAC-GCAGGA-TGGGCACGGAAGG-AAAAGAGGCAA-GTCA  137

seq1  GGGGCTAAAGGCCGAGATTAAGAAGAAAAGG-AAAAAATGCATTCAGGGC  197
       |||||||| ||||||||||||||||||||| ||||||||||||||||| 
seq2  -GGGCTAAA-GCCGAGATTAAGAAGAAAAGGAAAAAAATGCATTCAGGG-  184

seq1  CCAAATTTCAGGATACGTGTCCCTCTCCAATGAAGGGCGGA--GTTCCTG  245
      ||||||||||||||||||||||||||||||||||| |||||   ||||||
seq2  CCAAATTTCAGGATACGTGTCCCTCTCCAATGAAGAGCGGAAGTTTCCTG  234

seq1  GACACAAT-ACCTGTGTCTGGCAGGAAAGACGTAATGAGAGGAGACAAAG  294
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GACACAATAACCTGTGTCTGGCAGGAAAGACGTAATGAGAGGAGACAAAG  284

seq1  GGAGAAAGTAAAAAATCAAAATGCTCACTAGCAGAGCTCCTCAGAGAACC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGTAAAAAATCAAAATGCTCACTAGCAGAGCTCCTCAGAGAACC  334

seq1  TCCCACATAAGCAGTCCTGCACACAGACTGCGTTTCACAGCGCTGAATGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACATAAGCAGTCCTGCACACAGACTGCGTTTCACAGCGCTGAATGA  384

seq1  GGCCTCCGAGACTTTGATGTGCCCCTGAAAAGTGCAGCCCCAGTAGAACT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCCGAGACTTTGATGTGCCCCTGAAAAGTGCAGCCCCAGTAGAACT  434

seq1  ACTAACAGGGGCCACATCTGCACTGGGAAGCACTCTGTCTAACCTGTGGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAGGGGCCACATCTGCACTGGGAAGCACTCTGTCTAACCTGTGGT  484

seq1  AATAATTCCAACCAATGCTCACAACACCCACATACAGTGGCCATTTCCAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTCCAACCAATGCTCACAACACCCACATACAGTGGCCATTTCCAC  534

seq1  TTTACCTCTAGGAAACTAGAAGCTTGCACACAGATTAAGAATGGGGAGGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTCTAGGAAACTAGAAGCTTGCACACAGATTAAGAATGGGGAGGG  584

seq1  GGGGGATATAGGGAACTTTCGGGATAGCATTTCCAGCTTAAACCTAAACT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGATATAGGGAACTTTCGGGATAGCATTTCCAGCTTAAACCTAAACT  634

seq1  GTCCCAGTGGTTATGGCTGGGGCATAGACATGCCAATCCTGAAAACTCCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTGGTTATGGCTGGGGCATAGACATGCCAATCCTGAAAACTCCT  684

seq1  GGTAGTTTTTACATGCCTTTGCCCAATACCCCTAGACCATTTCATAAAAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTTTTACATGCCTTTGCCCAATACCCCTAGACCATTTCATAAAAG  734

seq1  GAAACAGACATGTGGGATATCTAAATTCCATTTCAGCTTACATTAATCTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGACATGTGGGATATCTAAATTCCATTTCAGCTTACATTAATCTT  784

seq1  GAATGACTGAAGAAACCAAGTGGTATAAAGTTCCTAGAGTAACTTGGCTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACTGAAGAAACCAAGTGGTATAAAGTTCCTAGAGTAACTTGGCTC  834

seq1  CTCAGTTAGGCAAGCATTCAGATTCTCTAAGCCTTTACTAGGCACCACAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTAGGCAAGCATTCAGATTCTCTAAGCCTTTACTAGGCACCACAG  884

seq1  TAAAACTGACCCTCAGGCAGCCTTACGAGCATATGCATAAAGGGACTGAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTGACCCTCAGGCAGCCTTACGAGCATATGCATAAAGGGACTGAA  934

seq1  AGCTTATTGAAGGTAACATTATCAGTAAGAGCAAAACACCTTTTGACGGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATTGAAGGTAACATTATCAGTAAGAGCAAAACACCTTTTGACGGG  984

seq1  AGGCTGAGTGAAGTTAGAACATGGTTTTAATTGGAGACCTTCACCCTTTA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGTGAAGTTAGAACATGGTTTTAATTGGAGACCTTCACCCTTTA  1034

seq1  TAAAGAAGTGAACCTGTCACGTTGAATTTCTGGATGTAGATTATATGTAC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGTGAACCTGTCACGTTGAATTTCTGGATGTAGATTATATGTAC  1084

seq1  TCCATTTTTTATATTCATTTCTCTGGCTGTCAAATTATTCATTAAAAATG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTTTATATTCATTTCTCTGGCTGTCAAATTATTCATTAAAAATG  1134

seq1  AATTGTAATTGTCATCATGAATTGAATTC  1173
      |||||||||||||||||||||||||||||
seq2  AATTGTAATTGTCATCATGAATTGAATTC  1163


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