BAC Information

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BAC

Clone NameB6Ng01-179D20
Chromosome14 (Build37)
Map Location 83,452,052 - 83,453,203
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179D20.bB6Ng01-179D20.g
ACCGA006016GA006017
length1,2261,153
definitionB6Ng01-179D20.b B6Ng01-179D20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattctataagaccttcaaagaagagctaataccaataaacttcaaac
tattccacaaaataaaaacagaaagaacactacctgattggttctatgat
accacaattatgcttatactgaaaccatgcagaaaacagactccccccaa
aaaagtacttcagaccaatttcccttatgaatagtcatgcaaaaatactc
aataaaattctcccaatccaaaaccaagaacacttcaaaacaatcatcca
tcatgatcaagtaggcttcatccagggatgcaggaatggttcaatataca
gaaatccattagcatatcccactacataaacaaactaaaaggacaaaacc
acatgatcatttcattagatgctgagaaagtgtttgacaaaattcaacac
ccattcatggtaaatgtcttggaaaatcaggaatttaagacccatatcta
aatgtattaaaagcaatagacagcaaaccagtaaccaacatcaaactaaa
tggagagaaacttgaagcattcccactaaaatcggggactagataacccc
actctctccctacctattcagtatagtactcaaattcgtagccagagcaa
ttagacaaaaaaggaggtcaaaggataaaaattagaaagaagtcaaaatg
tcactatttgcactataggatagttaagtgacccccaaaattctaccata
aaacttctacagctcataaaaaacttcaacaaagtggctgaatataaaat
taactcacacaaattagtaaccttcctctactcaaaggataaacagtgtg
agaaagaaattagagaaagtactcccttcaaaacagtcacaaataatata
aaatagtttggtgtgactataaccaagcaagtgaaagacctgtatgacaa
gaacttcagtctctgaagaaagaaaacaaagaagatctcctaagagggaa
agatctctcatgttcatggattggcaggattaataataggtaaaaatcac
cattcttggccttaaggcaaccctacaggattttaatgcaatatccatca
aaattttcagcctcaatttcatcatagaggttagaaagagcaattttgaa
aaatccatttgggattaacaaataacaagaatgaagaaactatttctcac
aataaaattaccttctgagggtatcacaacctgaacatctagctgcatta
taactctcaaatatggtgattaaaaa

gaattcaacttccttacattctgattactttatgattaatttttaccatc
accaaaatttactgagcaacaacaaaaatcttttcttaacaagactgaaa
gtagtactaatctttagattaaatgtgtaaacataacaaacgtaaatatt
tagagtctagtttgacaacatgcccaataaaatagtacgtcaatattcag
tttccactaccagggataagttttctacatggagtgggactcaagtccag
tcaaatttattgattaccatcaaacaaagataaaacaatattttctgttt
agcatggcttaaatcaacaatataccaaaccaaaatagtgtgtgtgcagg
tgcatatgtgtgtgtgtgtaaacacataatgcaaacaaaatatataactt
aaagtttttaactatagttgggagatatttacacatcatgttaacttctt
gtatgataccaagtgaactgaattctcaaatatgtgctgaaattagtcat
tgtacaatcatgagaatctatatactccactaatttactaagtaaactta
taaatatagttggttagaacaaggtaatttattaaagacctatcaaaata
tgataattataagggatatttttagaaacataatagctatccagatatta
ttatattctgttgaatttgttaaattatatcaattttaagtgtccaatta
tttaaattaatcaatttattattccattatttaataacaattattctgtg
ttccaatgagttaacaaggaacgaacatgtcaacatacttggacacaaga
gtttttgtagagtaaaatgtaaagtttttaaatggaatttattgaaaaat
atatactctttacgaaaatatataggctgagattgggtaaatttaaagat
aatttgtctattcaaaaaatacatgatcagcgaaaacttcagcaaaacag
aaagacttttattgaaataaaccatactgtcttgaaagagccaacactca
gaaaaaatgtctaagccaaggagaacattggagtgatagaaaatgaacat
gcctgtaccaacagtatgcatattttaaaatgagttagaatctgaagcca
agtacctgagaaaacctgggggctactctcaactcagacatacagcccag
agg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83452052_83453203
seq2: B6Ng01-179D20.g_63_1215 (reverse)

seq1  CCTCTGGGTTGTATGGGTCTGAGTGGAGAGTTAGCCCCCAAGGTTTTCTC  50
      |||||||| |||||  |||||||| ||||| |||||||| ||||||||||
seq2  CCTCTGGGCTGTAT--GTCTGAGTTGAGAG-TAGCCCCC-AGGTTTTCTC  46

seq1  AGGGTAC-TGGC-TCAGA-TCT-ACTCATTTT-AAATATGCATTACTGTT  95
      | ||||| |||| ||||| ||| ||||||||| ||||||||| |||||||
seq2  A-GGTACTTGGCTTCAGATTCTAACTCATTTTAAAATATGCA-TACTGTT  94

seq1  GGTACAGGCATTGTTCATTTTCTATCACTCCAATGTTCTCCTTGGCTTAG  145
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGGCA-TGTTCATTTTCTATCACTCCAATGTTCTCCTTGGCTTAG  143

seq1  ACATTTTTTCTGAGTGTTGGCTCTTTC-AGACAGTTATGGTTTATTTCA-  193
      ||||||||||||||||||||||||||| |||||| |||||||||||||| 
seq2  ACATTTTTTCTGAGTGTTGGCTCTTTCAAGACAG-TATGGTTTATTTCAA  192

seq1  -TAAAGTCTTTCTGTTTTGCTGAAGTTTTCGCTGATCATGTATTTTTTGA  242
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTCTTTCTGTTTTGCTGAAGTTTTCGCTGATCATGTATTTTTTGA  242

seq1  ATAGACAAATTATCTTTAAATTTA-CCAATCTCAGCCTATATATTTTCGT  291
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATAGACAAATTATCTTTAAATTTACCCAATCTCAGCCTATATATTTTCGT  292

seq1  AAAGAGTATATATTTTTCAATAAATTCCATTT-AAAACTTTACATTTTTA  340
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  AAAGAGTATATATTTTTCAATAAATTCCATTTAAAAACTTTACA-TTTTA  341

seq1  CTCTACAAAAACTCTTGTGTCCAAGTATGTTGACATGTTCGTTCCTTGTT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAAAAACTCTTGTGTCCAAGTATGTTGACATGTTCGTTCCTTGTT  391

seq1  AACTCATTGGAACACAGAATAATTGTTATTAAATAATGGAATAATAAATT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATTGGAACACAGAATAATTGTTATTAAATAATGGAATAATAAATT  441

seq1  GATTAATTTAAATAATTGGACACTTAAAATTGATATAATTTAACAAATTC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATTTAAATAATTGGACACTTAAAATTGATATAATTTAACAAATTC  491

seq1  AACAGAATATAATAATATCTGGATAGCTATTATGTTTCTAAAAATATCCC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATATAATAATATCTGGATAGCTATTATGTTTCTAAAAATATCCC  541

seq1  TTATAATTATCATATTTTGATAGGTCTTTAATAAATTACCTTGTTCTAAC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTATCATATTTTGATAGGTCTTTAATAAATTACCTTGTTCTAAC  591

seq1  CAACTATATTTATAAGTTTACTTAGTAAATTAGTGGAGTATATAGATTCT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATATTTATAAGTTTACTTAGTAAATTAGTGGAGTATATAGATTCT  641

seq1  CATGATTGTACAATGACTAATTTCAGCACATATTTGAGAATTCAGTTCAC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTGTACAATGACTAATTTCAGCACATATTTGAGAATTCAGTTCAC  691

seq1  TTGGTATCATACAAGAAGTTAACATGATGTGTAAATATCTCCCAACTATA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATCATACAAGAAGTTAACATGATGTGTAAATATCTCCCAACTATA  741

seq1  GTTAAAAACTTTAAGTTATATATTTTGTTTGCATTATGTGTTTACACACA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAACTTTAAGTTATATATTTTGTTTGCATTATGTGTTTACACACA  791

seq1  CACACATATGCACCTGCACACACACTATTTTGGTTTGGTATATTGTTGAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATATGCACCTGCACACACACTATTTTGGTTTGGTATATTGTTGAT  841

seq1  TTAAGCCATGCTAAACAGAAAATATTGTTTTATCTTTGTTTGATGGTAAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCATGCTAAACAGAAAATATTGTTTTATCTTTGTTTGATGGTAAT  891

seq1  CAATAAATTTGACTGGACTTGAGTCCCACTCCATGTAGAAAACTTATCCC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATTTGACTGGACTTGAGTCCCACTCCATGTAGAAAACTTATCCC  941

seq1  TGGTAGTGGAAACTGAATATTGACGTACTATTTTATTGGGCATGTTGTCA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTGGAAACTGAATATTGACGTACTATTTTATTGGGCATGTTGTCA  991

seq1  AACTAGACTCTAAATATTTACGTTTGTTATGTTTACACATTTAATCTAAA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGACTCTAAATATTTACGTTTGTTATGTTTACACATTTAATCTAAA  1041

seq1  GATTAGTACTACTTTCAGTCTTGTTAAGAAAAGATTTTTGTTGTTGCTCA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGTACTACTTTCAGTCTTGTTAAGAAAAGATTTTTGTTGTTGCTCA  1091

seq1  GTAAATTTTGGTGATGGTAAAAATTAATCATAAAGTAATCAGAATGTAAG  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTTTGGTGATGGTAAAAATTAATCATAAAGTAATCAGAATGTAAG  1141

seq1  GAAGTTGAATTC  1152
      ||||||||||||
seq2  GAAGTTGAATTC  1153


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