BAC Information

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BAC

Clone NameB6Ng01-180M11
Chromosome14 (Build37)
Map Location 44,315,555 - 44,315,707
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300
Downstream geneLOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180M11.bB6Ng01-180M11.g
ACCGA007120GA007121
length1,171989
definitionB6Ng01-180M11.b B6Ng01-180M11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatgactatgatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaaaaggaagaatcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctgacggttcctca
gaaaactggacatagtactactggaggatcccacaatacctcttctgggc
atatatccagaagatgttccaactggtaagaaggacacatgctccactat
gttcacagaagccttatttataatagccagaagctggaaaggacccagat
gcccctcaacagaggaatggatacaaaaattgtggtacatttacacaaag
gagtactactcagctattaaaaagaatgaatttatgaaactcctaggcaa
atggttggccctggagggcatcatcgtgagtgaggtaacacaatcacaaa
agaactcaaatgatatgtactcactgatatgtggatattagcccagaaac
ttagtatacccgagatatgagatacaattttcaaaactcatgaaactgaa
gaagaacgaagaccaaagtgtggacactttgccccttcttagaatttgga
acaaaatactcatggaaagagttacagagacaaagtttggagctgagaca
aaaggatggaccatctagagactgccatatccagggatccatcccataat
cagcctccaaacgatgacaccattgcacacaatagcaagagtttgctgaa
aggaccctgatatagctgtctcttgtgagaccaggccagggcctagcaaa
aacataagtggatgttcacagtcagctattgggatggattacagggcccc
aatggaggagctagagaaagtatccaaggagctaaagaaatctgcaccct
atagtgcacacattatgactaccagtaccccggactctgactctagctgc
atatgtatcaaaagattgctagtcgcatccactgggaaggaaggcccatt
gtactgcaccttaatatggcccagttacaggaaatgccatgccaaaagtg
gcaaagggtggctaggggaat
gaattctgctttacaatgataggaagagccgacatcgaaggatcaaaaag
cgatgtcgctatgaacgcttggccaccacaagccagttatccctgtggta
acttttctgacacgtcctgattatagactgtccaaatctatctttggtga
aagtattccatggccactgtgtgctccctgagattcgtgtttactccttc
aggttagtccaaccttgcatagactttgaaggtacagatagaactagagg
ctgctgaacacctcttctaaatgcctgccctttttcaaagaccaagtgac
catgagtgtgtgggttcattgctgggtcttcaattctattctattgatct
ttcttcctgtctctgtaccaacaccgttcagtttttttttaaattttatt
ttatcactattgctttgtaatatagcttgaggtcagagatggtaatttcc
ccagaagttcttttattgctgagaatagtttttgctatcctgtttttttt
ttttgttgttgttgttattcaaaatgaaattgcaaatgctttttctaact
ctatgaaaaactgagttggaattttgatggggattgcgttgaatctgtag
atgaattttggcaagatggccatttttactatattaatcctgccattcca
tgaacatgggagttctttctatcttctgagatcttcttcaattatgttct
tcagacacttgaaggtcttctcatacaaatctttcacatgcttagttaga
gtcacactaagttgttttatattatttgtgtctattgtggcgggtgtcca
ttccctaatttctttctcagcctgtttatcctttgagtagaggaaggcta
ctgatttgtttgattaactttatatccagccactttcctaaagttgttta
tcaagcttaggagttctctagtggaatatttggggttacttaaatatact
attataccatcagcagcagtgatatgttgacttctcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_44315555_44315707
seq2: B6Ng01-180M11.g_187_339

seq1  TTATAGACTGTCCCAATCTATCTCTGGAGAAAGTATTCCATGGCCACTGT  50
      ||||||||||||| ||||||||| ||| ||||||||||||||||||||||
seq2  TTATAGACTGTCCAAATCTATCTTTGGTGAAAGTATTCCATGGCCACTGT  50

seq1  GTGCTCCCTGAGATTCGTGTTTACTCCTTCAGGTTAGTCCAGCCTTGAGT  100
      ||||||||||||||||||||||||||||||||||||||||| |||||  |
seq2  GTGCTCCCTGAGATTCGTGTTTACTCCTTCAGGTTAGTCCAACCTTGCAT  100

seq1  AGACTTTGAAGGTACAGATAGAACCAGAGGCTGATGAACACCTCTTCCAA  150
      |||||||||||||||||||||||| |||||||| ||||||||||||| ||
seq2  AGACTTTGAAGGTACAGATAGAACTAGAGGCTGCTGAACACCTCTTCTAA  150

seq1  ATG  153
      |||
seq2  ATG  153