BAC Information

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BAC

Clone NameB6Ng01-180N05
Chromosome14 (Build37)
Map Location 99,727,344 - 99,728,392
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC635593, LOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5
Downstream geneLOC100043400, LOC100043789, LOC668671, LOC668672, EG546623, Klf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180N05.bB6Ng01-180N05.g
ACCGA007156GA007157
length1,0571,046
definitionB6Ng01-180N05.b B6Ng01-180N05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttaactctgtacgccatttttttaaacttggttattttt
gtttttggaggttagcttcttgagttcttaatatatttggatattagccc
tctatcagatgtggagttgatgaagatttttttttcccaatctgttggtt
gccaatttgtcccattgactgtgtcttttgccttacagaagcttttcagt
ttcatagggccccatttactgattcttgatcttagaagctgaaccattag
agctctgtttaggaaatttcccccagtgccaatgcgtttgaggctctttc
cagctttctcttctatttgattcaatgtatctggttttatgttgagtcct
tgatccacttagacttgagccttgtgcaaggtgattaaaatatagatcta
tttttatttttctacatgcagaccaacaagttagaccagcaaaatttatt
gaaagtgccttctttcttccattgtatgtttttggctgctgtatcaaaat
tcaagtgtccttaagtgagtggttttatttctgggtcttcaattccattc
cattgatcaacgtatctgtctctgtaccaataccatgtggtctctgtagt
aaagcttgaggtcaggtatggtaattcaaccagaagttcttttattgttg
agaattgttttggctatcttgggtttttttgtttttccatgtgaaattga
gatttgcttttgcagtctgtgaagaatcgtgttggaaactcaatggtgat
tgcgttgaatctgtagattgcttttggtaggatggccatttttattatgt
taatcttacccaatccatgagcatggagatccttccatcttctgaggaag
atggaatttcaattccatcaatgaatttcatattcaatttcttttttttt
tttcagggagtggaagttcttgttatacagatctttcacttgcttggtat
gagttacccaagatattttatactaatttgtggaattgtgaagggtgtgt
tcactatttcttctctagcccgtttatctattgtatataaaggtatgcgt
aactcga
gaattcccaatactgttttcagaatagctgcctttgccacctttgacttg
gccacatcctctttggcacagtgcttctgtcaaagccagaattcattttc
tatttgatgggtaggtagcaacagatgatgctctgggaccctttctcatt
gctgagctctgttcttggtcttaatgtgaattatctctttaaaatgtccc
aacaatcctgaaagaaaaatactgctgttcagtgtgtttgctgtttggta
aggtactccttccttccatcactgttcaacactcaggaggcaaaggcagg
ggggatctgtgtaagtttgaggccagcctggtctatagagagcattcctg
aacagttggcagagaaaccctgtctcaaaacaaaacaaaacaaattcttc
aatgagttattaaataactattccaatggaaggtgaaaacacagtctgaa
aataattgaaccaagttattcccagcggcttggaacaacttagtgtcaat
aattcttgcccctgtcacttcttggctttttagattacaccaattcttct
taactagtggatttagtcactagcccgcatggacaggtcctagagagaag
ggacagaaccggaaatgtgcaggacagaaaggacatcgagttcattgtta
tacaagcaagactttgtgaaaatagtccagtgggcagtgaaggctcctga
gacagacatcattcattctgtagccccatgcgaccttatactctctgtgc
aagcaagggtggactttcaatttgtaatcctcctgcctccgccacacaag
tgctgagatttacagggccccaccaccattactagcttatttggggcaac
aaaaaacaaaacaaagctgttatatagaccaagagctctcagtgacatcc
aggggcaagcctctagtggctgaggccaagaatgctgccaaatgtcctac
aggacagggacaggacaaacaccactctgtccaggagagtgccaaggtgg
agggagactattatgaactaggaaagttatatgatgtaaattgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99727344_99728392
seq2: B6Ng01-180N05.g_68_1113 (reverse)

seq1  TTTCCATTTACATCATAATAACTTTCCTATGTCATTAAATAGTCTCCCTC  50
      |||| ||||||||||| ||||||||||||  ||||  |||||||||||||
seq2  TTTCAATTTACATCAT-ATAACTTTCCTAGTTCAT--AATAGTCTCCCTC  47

seq1  CACCTTGGCACTCTCCTGGACCAGAGTGTTGTTTGTCCTGTCCCTGTCCT  100
      |||||||||||||||||||| ||||||| |||||||||||||||||||||
seq2  CACCTTGGCACTCTCCTGGA-CAGAGTGGTGTTTGTCCTGTCCCTGTCCT  96

seq1  GTAGGACATTTGGCAGCATTCTTGGCCTCAGCCACTAGAGGCTTGCCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGACATTTGGCAGCATTCTTGGCCTCAGCCACTAGAGGCTTGCCCCT  146

seq1  GGATGTCACTGAGAGCTCTTGGTCTATATAACAGCTTTGTTTTGTTTTTT  200
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGATGTCACTGAGAGCTCTTGGTCTATATAACAGCTTTGTTTTG-TTTTT  195

seq1  TGTTGCCCCAAATAAGCTAGTAATGGTGGTGGGGCCCTGT-AATCTCAGC  249
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGTTGCCCCAAATAAGCTAGTAATGGTGGTGGGGCCCTGTAAATCTCAGC  245

seq1  ACTTGTGTGGCGGAGGCAGGAGGATTACAAATTG-AAGTCCACCCTTGCT  298
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACTTGTGTGGCGGAGGCAGGAGGATTACAAATTGAAAGTCCACCCTTGCT  295

seq1  TGCACAGAGAGTATAAGGTCGCATGGGGCTACAGAATGAATGATGTCTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGAGAGTATAAGGTCGCATGGGGCTACAGAATGAATGATGTCTGT  345

seq1  CTCAGGAGCCTTCACTGCCCACTGGACTATTTTCACAAAGTCTTGCTTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGCCTTCACTGCCCACTGGACTATTTTCACAAAGTCTTGCTTGT  395

seq1  ATAACAATGAACTCGATGTCCTTTCTGTCCTGCACATTTCCGGTTCTGTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATGAACTCGATGTCCTTTCTGTCCTGCACATTTCCGGTTCTGTC  445

seq1  CCTTCTCTCTAGGACCTGTCCATGCGGGCTAGTGACTAAATCCACTAGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTCTAGGACCTGTCCATGCGGGCTAGTGACTAAATCCACTAGTT  495

seq1  AAGAAGAATTGGTGTAATCTAAAAAGCCAAGAAGTGACAGGGGCAAGAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAATTGGTGTAATCTAAAAAGCCAAGAAGTGACAGGGGCAAGAAT  545

seq1  TATTGACACTAAGTTGTTCCAAGCCGCTGGGAATAACTTGGTTCAATTAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACACTAAGTTGTTCCAAGCCGCTGGGAATAACTTGGTTCAATTAT  595

seq1  TTTCAGACTGTGTTTTCACCTTCCATTGGAATAGTTATTTAATAACTCAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGACTGTGTTTTCACCTTCCATTGGAATAGTTATTTAATAACTCAT  645

seq1  TGAAGAATTTGTTTTGTTTTGTTTTGAGACAGGGTTTCTCTGCCAACTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATTTGTTTTGTTTTGTTTTGAGACAGGGTTTCTCTGCCAACTGT  695

seq1  TCAGGAATGCTCTCTATAGACCAGGCTGGCCTCAAACTTACACAGATCCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAATGCTCTCTATAGACCAGGCTGGCCTCAAACTTACACAGATCCC  745

seq1  CCCTGCCTTTGCCTCCTGAGTGTTGAACAGTGATGGAAGGAAGGAGTACC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCTTTGCCTCCTGAGTGTTGAACAGTGATGGAAGGAAGGAGTACC  795

seq1  TTACCAAACAGCAAACACACTGAACAGCAGTATTTTTCTTTCAGGATTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAAACAGCAAACACACTGAACAGCAGTATTTTTCTTTCAGGATTGT  845

seq1  TGGGACATTTTAAAGAGATAATTCACATTAAGACCAAGAACAGAGCTCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACATTTTAAAGAGATAATTCACATTAAGACCAAGAACAGAGCTCAG  895

seq1  CAATGAGAAAGGGTCCCAGAGCATCATCTGTTGCTACCTACCCATCAAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGAAAGGGTCCCAGAGCATCATCTGTTGCTACCTACCCATCAAAT  945

seq1  AGAAAATGAATTCTGGCTTTGACAGAAGCACTGTGCCAAAGAGGATGTGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGAATTCTGGCTTTGACAGAAGCACTGTGCCAAAGAGGATGTGG  995

seq1  CCAAGTCAAAGGTGGCAAAGGCAGCTATTCTGAAAACAGTATTGGGAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCAAAGGTGGCAAAGGCAGCTATTCTGAAAACAGTATTGGGAATT  1045

seq1  C  1049
      |
seq2  C  1046