BAC Information

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BAC

Clone NameB6Ng01-180P01
Chromosome14 (Build37)
Map Location 41,072,863 - 41,074,033
singlet/doubletsinglet
Overlap genenone
Upstream geneNrg3, LOC100040439
Downstream geneLOC218945, LOC100040470, LOC382876, Sh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd, LOC666093, EG666099
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180P01.bB6Ng01-180P01.g
ACCGA007241GA007242
length1,176771
definitionB6Ng01-180P01.b B6Ng01-180P01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacagtttctcacctggcagaagatcctttccaaaatgcaacta
tcccagtagcctgatctcagaagtcggtgcaagatattgacagataaatg
tcacccagccacctaaatcattttgttttagttgcctgaacaagctaaaa
ccagatctttctccagaactctcggatatcatgaaatccagatgagcaaa
atctgctgtcccttgtgcagagaaactgcaaatgtttgttgctagcacaa
gcaatctttgatggagtgttatgcatcagtaataacaggatagatattga
tactgaagacccaacctcactactgttttcatgtactctataaattgtac
ttactgccatttgatgagtgtttatcattttagacatgcatcctatcttt
tagaaaatggttataaattctttgtaggtcctgtcagattttaatgtagc
taaattatttgtatctaatatacattattttgaaggctgactcatgttta
tttattattgcctttgtcaaacatcatttgaaatgtgttctattcacatg
tattttagtcagaatttggatagcactaaaatgataatttatatctacag
tatttctggaatgtttccattctctttttccctggaaaaaatgatatttg
ctgggctcaaacaagaagaaatgcctgactgggactgtgcactgattggc
tggaacaagtgctctcagacacaggcagcctggctctatggttggctctg
agaagctcatgacacttcttcacatcttatctaagagaagatacaatagg
catggagtaaataataattaaataaataaacaaactttgtgaaacccagg
aattgttaaatatcatgaaaattatttcctatactaattttatagaaatt
ctcttttaaaatatcttgggccaaattaccattgattagaatgttttcag
attcctttacagtttacagactgttaaacttatgttttccattttaatca
atgatgataatttatatattctggaattgctatttatttcatcccaagga
ataaaaacaataatgttgtaagaacattaatgaacatttttgttctcacc
tacaaatgaattctgaattcttaatattatttaattagcaatgttcttaa
tattactggttaagaattgaattcct
gaattctattgactgtgattgcttaacacattaccttagactggatagta
aacacaccaccagggtttctatgctgaaaaagcacattaaaggagatgta
gagactgtagccttgtccatataccagcaactggatacttaagctatttg
agaatttagtgttctgacttcaggagtatggtataccatgtttcttgttt
aaaggcacagtgtgtcaagtagggtggccacaaggtcatgcctgcgtttt
ctcctacactcaagcagcaagtgggaacagattcagagattcgcatctag
gcattacatggaaagaatgtctaactgggaagtctccatcaaaatccctc
atctcagagcttaggaaatctgaaaataaaaaggagttagaaggattatg
agagctagagaggatggaggacaccaggagaactaggctatctgcatcaa
ctaagcaaggaatacatgaactcacagagactgatatagcaagcccaggg
cctacatgaacaccaggtaccctgcaaacatatagctattagcttagtat
ttttacaggacacctgactttgagaatgattcggtttctgacttttgtgc
gtgttcttgggacttttctcctcctgttgggttgcagtgtccaacttcaa
tatgatagattttgtttcatcttactttgtcatgttttgatcttacctct
tagaagcctgttcttcactaatgagagacagaaagggagcatacatgggg
aaaggggatgtggaggatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_41072863_41074033
seq2: B6Ng01-180P01.b_44_1219

seq1  GAATTCAACAGTTTCTCACCTGGCAGAAGATCCTTTCCAAAATGCAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGTTTCTCACCTGGCAGAAGATCCTTTCCAAAATGCAACTA  50

seq1  TCCCAGTAGCCTGATCTCAGAAGTCGGTGCAAGATATTGACAGATAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTAGCCTGATCTCAGAAGTCGGTGCAAGATATTGACAGATAAATG  100

seq1  TCACCCAGCCACCTAAATCATTTTGTTTTAGTTGCCTGAACAAGCTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCAGCCACCTAAATCATTTTGTTTTAGTTGCCTGAACAAGCTAAAA  150

seq1  CCAGATCTTTCTCCAGAACTCTCGGATATCATGAAATCCAGATGAGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCTTTCTCCAGAACTCTCGGATATCATGAAATCCAGATGAGCAAA  200

seq1  ATCTGCTGTCCCTTGTGCAGAGAAACTGCAAATGTTTGTTGCTAGCACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTGTCCCTTGTGCAGAGAAACTGCAAATGTTTGTTGCTAGCACAA  250

seq1  GCAATCTTTGATGGAGTGTTATGCATCAGTAATAACAGGATAGATATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTTTGATGGAGTGTTATGCATCAGTAATAACAGGATAGATATTGA  300

seq1  TACTGAAGACCCAACCTCACTACTGTTTTCATGTACTCTATAAATTGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAGACCCAACCTCACTACTGTTTTCATGTACTCTATAAATTGTAC  350

seq1  TTACTGCCATTTGATGAGTGTTTATCATTTTAGACATGCATCCTATCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCCATTTGATGAGTGTTTATCATTTTAGACATGCATCCTATCTTT  400

seq1  TAGAAAATGGTTATAAATTCTTTGTAGGTCCTGTCAGATTTTAATGTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATGGTTATAAATTCTTTGTAGGTCCTGTCAGATTTTAATGTAGC  450

seq1  TAAATTATTTGTATCTAATATACATTATTTTGAAGGCTGACTCATGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATTTGTATCTAATATACATTATTTTGAAGGCTGACTCATGTTTA  500

seq1  TTTATTATTGCCTTTGTCAAACATCATTTGAAATGTGTTCTATTCACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTGCCTTTGTCAAACATCATTTGAAATGTGTTCTATTCACATG  550

seq1  TATTTTAGTCAGAATTTGGATAGCACTAAAATGATAATTTATATCTACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGTCAGAATTTGGATAGCACTAAAATGATAATTTATATCTACAG  600

seq1  TATTTCTGGAATGTTTCCATTCTCTTTTTCCCTGGAAAAAATGATATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGGAATGTTTCCATTCTCTTTTTCCCTGGAAAAAATGATATTTG  650

seq1  CTGGGCTCAAACAAGAAGAAATGCCTGACTGGGACTGTGCACTGATTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTCAAACAAGAAGAAATGCCTGACTGGGACTGTGCACTGATTGGC  700

seq1  TGGAACAAGTGCTCTCAGACACAGGCAGCCTGGCTCTATGGTTGGCTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACAAGTGCTCTCAGACACAGGCAGCCTGGCTCTATGGTTGGCTCTG  750

seq1  AGAAGCTCATGACACTTCTTCACATCTTATCTAAGAGAAGATACAATAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTCATGACACTTCTTCACATCTTATCTAAGAGAAGATACAATAGG  800

seq1  CATGGAGTAAATAATAATTAAATAAATAAACAAACTTTGTGAAACCCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGTAAATAATAATTAAATAAATAAACAAACTTTGTGAAACCCAGG  850

seq1  AATTGTTAAATATCATGAAAATTATTTCCTATACTAATTTTATAGAAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTAAATATCATGAAAATTATTTCCTATACTAATTTTATAGAAATT  900

seq1  CTCTTTTAAAATATCTTGGGCCAAATTACCATTGATTAGAATGTTTTCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTAAAATATCTTGGGCCAAATTACCATTGATTAGAATGTTTTCAG  950

seq1  ATTCCTTTACAGTTTACAGACTGTTAAACTTATGTTTTCCATTTTAATCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTACAGTTTACAGACTGTTAAACTTATGTTTTCCATTTTAATCA  1000

seq1  ATGATGATAATTTATATATTCTGGAATTGCTATTTATTTCATCCCAA-GA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATGATGATAATTTATATATTCTGGAATTGCTATTTATTTCATCCCAAGGA  1050

seq1  AT-AAAACATAATTGTTGTA--GACATTAAATGACA-TTTTGTTCTCAAC  1095
      || ||||||  | |||||||   |||||||   ||| ||||||||||| |
seq2  ATAAAAACAATAATGTTGTAAGAACATTAATGAACATTTTTGTTCTCACC  1100

seq1  TACAAATG-ATTCTGAATTCTTAATATTATTTAAATTAGGCATGTCCTT-  1143
      |||||||| ||||||||||||||||||||||| ||||||  |||| ||| 
seq2  TACAAATGAATTCTGAATTCTTAATATTATTT-AATTAGCAATGTTCTTA  1149

seq1  ATATTACTGGTTTAAAGAATTG-ATTCCT  1171
      ||||||||||||  |||||||| ||||||
seq2  ATATTACTGGTT--AAGAATTGAATTCCT  1176