BAC Information

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BAC

Clone NameB6Ng01-181H22
Chromosome14 (Build37)
Map Location 15,937,034 - 15,938,157
singlet/doubletsinglet
Overlap genenone
Upstream genePsmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
Downstream geneLrrc3b, LOC667205, 1700062C10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181H22.bB6Ng01-181H22.g
ACCGA007641GA007642
length1,1291,130
definitionB6Ng01-181H22.b B6Ng01-181H22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccattttttaatagggttatttggtt
ctctggagtctaacttattgagttctttgtatatattggatattagccct
ttatcatatgtagggtttgtaaagatctttttccaatctgttggttgctg
tttgtcctattgacagtgttctttgcctcttgcaattttatgaggcccca
tttgtcacttgttgatcttaaagcataagccattggtattctgttcagga
agattccccctgtacccatatgtttgaggctcttccctgctttcttctct
ataaggttcagtgtctctggttttaagtggagatccttgatccacttgta
tttgagctttgtacaaggagataagaataaattcatttgtattcttctac
ctgcggacctccagttgaaccaacaccatttgttgaaaatgtagtctttt
ttcccattcaatggttttagctcctttgtcaaatatcaagtgaccatcgg
tgtgtgggttcatttctgggtcttcacttctattccattgatctacctac
ctgtcactgtaccaataccatgtagtttttatcacaattgctctgtagta
caacttgaggtcagaaatcgtgattctgccagaagatattttatttattt
gagaatagttttcactttcctgggttttttgttattccaaatgaatttgc
aaattcctctttctaactctatgaagaattgagttggaattttgatcagg
attgcattaaatctatagattgctttcagccagatggccatttttactat
attaatcttgtcaatccattagcatgggagattttttccatcttctgaga
tcttcttcatttttttttcagagacttgaaattcttattgtccagatctt
tcacttcctttagttagagtcacaccaaggtatttttattattatttgtg
attattgtgaagggtgtttgtttctctaatttcattctcatcctttttat
ccctttgtgcagaaggaatgcaatgattatttgattattttatattcagc
tactttgctgagtgttatcagctgaagtgtcctgttgacttttgggtcac
tatgatattccatatccactctgcaatat
gaattctgtgacaatctgtgccccactctgctctctttctgccatggggg
gagtatagctagaagtccccagactgcagcccagaagaaaaccaacacca
gaatacatcagcctcaggcttcccatttaccaagcagggatagagacact
ctccaccaactattaagtttggtgaggccaaattcttagcgtggtgatga
ccatagtagcttaacaacggagcagatactgtgtaagttagtctaatcta
aacttaagttctgcatctactgagtgttgccctttgggccagtaacttat
tcattttgataagcctcagtttccctacatgtaaactgtaaataataata
ttccccaatctcccagccttttgggtggtaggttaataggtggactgtgc
ttaataaacatggaatggacacctcatcacaactaaaaactagtagtagg
aaaagccattacaagctagtggctaatgggataatttgttcattttagca
cccattgtgacccttcttcttaagagatcattctgcaaaccttagtggca
ggggagacacacttgaaaatgtggagctgggtgaattaacaagtatctac
tgaggaaggcaatgtcctgtcacagagctaacaggcaacactctcaactg
gaaagagggccagtgctgatggccatgtgtaatagctgattgaagttaca
aagaaaatcccatgtttcttttcttaatctgcacctaattaagtctaacc
taatctaatatagtttaatctaacctttagtcttctagcctttttgatta
ctaaaactactgtctttcaaactctgttttatgctttcttcaggtaccaa
ctgtaattttcagagtcaaaaaattggaaagcttgcttgacagccttaga
aatgctacaagaaataatttgctttaccaaagtagaatccagggagtgtg
gtccaaagcacctactactcaagtgaccctgtaaaaccaagatctgaagc
ctccctgaataagagatattcacacaaaaatatgggagagaaatctaagc
ttgagttcctggggaggaacttcctacttggatgagaaggagcctttcaa
aggttgcctggacaatgccagactcacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_15937034_15938157
seq2: B6Ng01-181H22.g_67_1196 (reverse)

seq1  AATGTGAGTTCTGGGCATTGT-CAAGCAACTTTTTGAAAAGCT-CTTCTC  48
      |||||||| ||| |||||||| || |||||  ||||||| ||| ||||||
seq2  AATGTGAG-TCT-GGCATTGTCCAGGCAAC-CTTTGAAAGGCTCCTTCTC  47

seq1  ATCCAAGTAGG-AGTTCCT-CCCAGG-ACTCAGCTTTAGATTTCTCTTCC  95
      ||||||||||| ||||||| |||||| |||||   ||||||||||||  |
seq2  ATCCAAGTAGGAAGTTCCTCCCCAGGAACTCAAGCTTAGATTTCTCT--C  95

seq1  CCATA-TTTTGTGTGATTATCTCTTA-TCAGGGA-GCCTCAGATCTTGGT  142
      ||||| |||||||||| ||||||||| ||||||| || ||||||||||||
seq2  CCATATTTTTGTGTGAATATCTCTTATTCAGGGAGGCTTCAGATCTTGGT  145

seq1  TTTACAGGGTCACTTGAGTAGTAGGTGCTTTGGACCACACTCCCTGGATT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGGGTCACTTGAGTAGTAGGTGCTTTGGACCACACTCCCTGGATT  195

seq1  CTACTTTGTAAAAGC-AATTATTTCTTGTAGCATTTCTAAGGCTGTCAAG  241
      ||||||||  ||||| ||||||||||||||||||||||||||||||||||
seq2  CTACTTTGGTAAAGCAAATTATTTCTTGTAGCATTTCTAAGGCTGTCAAG  245

seq1  C-AGCTTTCCAA-TTTTTGACTCTGAAAATTACAGTTGGTACCTGAAGAA  289
      | |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTTCCAATTTTTTGACTCTGAAAATTACAGTTGGTACCTGAAGAA  295

seq1  AGCATAAAACAGAGTTTGAAAGACAGTAGTTTTAGTAATCAAAAAGGCTA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAAACAGAGTTTGAAAGACAGTAGTTTTAGTAATCAAAAAGGCTA  345

seq1  GAAGACTAAAGGTTAGATTAAACTATATTAGATTAGGTTAGACTTAATTA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTAAAGGTTAGATTAAACTATATTAGATTAGGTTAGACTTAATTA  395

seq1  GGTGCAGATTAAGAAAAGAAACATGGGATTTTCTTTGTAACTTCAATCAG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGATTAAGAAAAGAAACATGGGATTTTCTTTGTAACTTCAATCAG  445

seq1  CTATTACACATGGCCATCAGCACTGGCCCTCTTTCCAGTTGAGAGTGTTG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACACATGGCCATCAGCACTGGCCCTCTTTCCAGTTGAGAGTGTTG  495

seq1  CCTGTTAGCTCTGTGACAGGACATTGCCTTCCTCAGTAGATACTTGTTAA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTAGCTCTGTGACAGGACATTGCCTTCCTCAGTAGATACTTGTTAA  545

seq1  TTCACCCAGCTCCACATTTTCAAGTGTGTCTCCCCTGCCACTAAGGTTTG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCAGCTCCACATTTTCAAGTGTGTCTCCCCTGCCACTAAGGTTTG  595

seq1  CAGAATGATCTCTTAAGAAGAAGGGTCACAATGGGTGCTAAAATGAACAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGATCTCTTAAGAAGAAGGGTCACAATGGGTGCTAAAATGAACAA  645

seq1  ATTATCCCATTAGCCACTAGCTTGTAATGGCTTTTCCTACTACTAGTTTT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCCATTAGCCACTAGCTTGTAATGGCTTTTCCTACTACTAGTTTT  695

seq1  TAGTTGTGATGAGGTGTCCATTCCATGTTTATTAAGCACAGTCCACCTAT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGTGATGAGGTGTCCATTCCATGTTTATTAAGCACAGTCCACCTAT  745

seq1  TAACCTACCACCCAAAAGGCTGGGAGATTGGGGAATATTATTATTTACAG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTACCACCCAAAAGGCTGGGAGATTGGGGAATATTATTATTTACAG  795

seq1  TTTACATGTAGGGAAACTGAGGCTTATCAAAATGAATAAGTTACTGGCCC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGTAGGGAAACTGAGGCTTATCAAAATGAATAAGTTACTGGCCC  845

seq1  AAAGGGCAACACTCAGTAGATGCAGAACTTAAGTTTAGATTAGACTAACT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCAACACTCAGTAGATGCAGAACTTAAGTTTAGATTAGACTAACT  895

seq1  TACACAGTATCTGCTCCGTTGTTAAGCTACTATGGTCATCACCACGCTAA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTATCTGCTCCGTTGTTAAGCTACTATGGTCATCACCACGCTAA  945

seq1  GAATTTGGCCTCACCAAACTTAATAGTTGGTGGAGAGTGTCTCTATCCCT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGGCCTCACCAAACTTAATAGTTGGTGGAGAGTGTCTCTATCCCT  995

seq1  GCTTGGTAAATGGGAAGCCTGAGGCTGATGTATTCTGGTGTTGGTTTTCT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTAAATGGGAAGCCTGAGGCTGATGTATTCTGGTGTTGGTTTTCT  1045

seq1  TCTGGGCTGCAGTCTGGGGACTTCTAGCTATACTCCCCCCATGGCAGAAA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCTGCAGTCTGGGGACTTCTAGCTATACTCCCCCCATGGCAGAAA  1095

seq1  GAGAGCAGAGTGGGGCACAGATTGTCACAGAATTC  1124
      |||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGAGTGGGGCACAGATTGTCACAGAATTC  1130