BAC Information

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BAC

Clone NameB6Ng01-182D15
Chromosome14 (Build37)
Map Location 124,148,739 - 124,285,771
singlet/doubletdoublet
Overlap geneItgbl1
Upstream genePcca, BC006662, 4930594M22Rik, Tmtc4, Vgcnl1, LOC668700
Downstream geneFgf14, GA_x5J8B7W4W3R-189177-188236
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182D15.bB6Ng01-182D15.g
ACCGA008178GA008179
length1,020919
definitionB6Ng01-182D15.b B6Ng01-182D15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,148,739 - 124,149,749)(124,284,855 - 124,285,771)
sequence
gaattcatgaaattcttaggcaattctggacaatatcatcctgagtgagg
taacctaatctcaaaagaagtcacttgctatgataagtggatattagctc
agaaacttagaatatccaagatacaatttacaaaacacaagaaaatcaag
aagaaggaagaccaacccatggatacttcattcctccctagaataggaga
caaaagactcttggaaggagttacagagacaaagtttggagctaagacga
aaggatggaccattcagagattcccccacttgggggcccatcccataatc
agccaccaaaggcagatactattgcagatgccagcaagattatgctgaaa
ggatcctgatatagctctctcttgtgggtgggttggggagcatggccggg
ggagggtatagggaactttggggatagcatttgaaatgtaaatgaagaaa
attctagcaaaaatgtgctgtgactcaataacccatgccatataaatatc
tcccatggagaataatcacttctgaaagtgcaggaagcttcccaggtcag
caaggtgttccttaaggaagcacatttaattattatatttttatttttaa
aaatcattttaagagttaatttgttttctaaggacttttgtcttcttttc
atgttgctttgtgtcatggattacattatcttttaaattattatctattt
tattttattttttgtatattaatcaaacaaataatggatttattatgatg
ttgtcacacatgtatataatgtagtttgattatatttgcccatgttcccc
tcatttgagagatattaacaatattcaaaactttatgatggagcacagat
ttaatccttagcacttgggttgttggagcagaggcagagcagaggcagag
gctaatgcagatggcagaagcaggcagatctcttgtgaatttccaggctg
gaccgggcacacctcagtgaaccttctgtcaaaaaaaaataatatatatg
aatgcaaataaacaaattgc

gaattcaagactagcttcaccttaatgagttttaatctagcctaggctat
gaaccatgtctcaaaaaacaatcttgataaataactttattttttaaagt
aagttattgttagtctagaaaaacataagaagtaatctttgaaatattct
cataagttattgctaatataccaatatcggcttgctttgtcataggatca
aatagaaataattaacattatcttcatttttttctatttttgtgaatttt
ttagtgatttattttaaaaattaaacacacagaaattaattggagaataa
catccaccttgataataataacaaccatcagtgatttacaaagttaaaga
ttattaataatgaaagcactgtaaaatgtgactatagtatattgtccttc
atacaaagtagtataaatgatggaaacacccacactacttttggcattag
cccacaagttcagagaaaacactgacatacacacacacacacacacacac
acacacatatgcacaccactttgacctaatttcagatttagttttctttt
ttctttacagagtcctgctgccgaatccagaacttaactcatgggacaac
tcccaagagtgtattttccattgaaagattttgaaccagagaagaagcca
tgctgtgaaccaggtcgtggattccctgcaagtgatccttagttcaaaga
gactgatcttgcatggaaccttctagtatcagaaaaaaaaaaaagaaaga
aagaaagtttgacctttccaaagaaagtgcacatcaatttgttattcaat
gccaaatagccctaaaaacacacatacaggtagcactatacaaacttaaa
agtatttatatatatatgtatatgtacgtgtatatgtatatgtgtatgtg
tatgtgtatgtgtgtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_124148739_124149749
seq2: B6Ng01-182D15.b_43_1062

seq1  GAATTCATGAAATTCTTAGGCAATTCTGGACAATATCATCCTGAGTGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAAATTCTTAGGCAATTCTGGACAATATCATCCTGAGTGAGG  50

seq1  TAACCTAATCTCAAAAGAAGTCACTTGCTATGATAAGTGGATATTAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTAATCTCAAAAGAAGTCACTTGCTATGATAAGTGGATATTAGCTC  100

seq1  AGAAACTTAGAATATCCAAGATACAATTTACAAAACACAAGAAAATCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTAGAATATCCAAGATACAATTTACAAAACACAAGAAAATCAAG  150

seq1  AAGAAGGAAGACCAACCCATGGATACTTCATTCCTCCCTAGAATAGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGAAGACCAACCCATGGATACTTCATTCCTCCCTAGAATAGGAGA  200

seq1  CAAAAGACTCTTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTAAGACGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGACTCTTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTAAGACGA  250

seq1  AAGGATGGACCATTCAGAGATTCCCCCACTTGGGGGCCCATCCCATAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGGACCATTCAGAGATTCCCCCACTTGGGGGCCCATCCCATAATC  300

seq1  AGCCACCAAAGGCAGATACTATTGCAGATGCCAGCAAGATTATGCTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCAAAGGCAGATACTATTGCAGATGCCAGCAAGATTATGCTGAAA  350

seq1  GGATCCTGATATAGCTCTCTCTTGTGGGTGGGTTGGGGAGCATGGCCGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCTGATATAGCTCTCTCTTGTGGGTGGGTTGGGGAGCATGGCCGGG  400

seq1  GGAGGGTATAGGGAACTTTGGGGATAGCATTTGAAATGTAAATGAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTATAGGGAACTTTGGGGATAGCATTTGAAATGTAAATGAAGAAA  450

seq1  ATTCTAGCAAAAATGTGCTGTGACTCAATAACCCATGCCATATAAATATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGCAAAAATGTGCTGTGACTCAATAACCCATGCCATATAAATATC  500

seq1  TCCCATGGAGAATAATCACTTCTGAAAGTGCAGGAAGCTTCCCAGGTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGGAGAATAATCACTTCTGAAAGTGCAGGAAGCTTCCCAGGTCAG  550

seq1  CAAGGTGTTCCTTAAGGAAGCACATTTAATTATTATATTTTTATTTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGTTCCTTAAGGAAGCACATTTAATTATTATATTTTTATTTTTAA  600

seq1  AAATCATTTTAAGAGTTAATTTGTTTTCTAAGGACTTTTGTCTTCTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTTTAAGAGTTAATTTGTTTTCTAAGGACTTTTGTCTTCTTTTC  650

seq1  ATGTTGCTTTGTGTCATGGATTACATTATCTTTTAAATTATTATCTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCTTTGTGTCATGGATTACATTATCTTTTAAATTATTATCTATTT  700

seq1  TATTTTATTTTTTGTATATTAATCAAACAAATAATGGATTTATTATGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTTTTGTATATTAATCAAACAAATAATGGATTTATTATGATG  750

seq1  TTGTCACACATGTATATAATGTAGTTTGATTATATTTGCCCATGTTCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACACATGTATATAATGTAGTTTGATTATATTTGCCCATGTTCCCC  800

seq1  TCATTTGAGAGATATTAACAATATTCAAAAC-TTATGATGGAGCACAGAT  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCATTTGAGAGATATTAACAATATTCAAAACTTTATGATGGAGCACAGAT  850

seq1  TTAATCC-TAGCACTTGGG-TGTTGGAGCAGAGGCAGAGGCAGAGGCAGA  897
      ||||||| ||||||||||| |||||||||||||||||| |||||||||||
seq2  TTAATCCTTAGCACTTGGGTTGTTGGAGCAGAGGCAGA-GCAGAGGCAGA  899

seq1  GGCAGAGGCAGA-GGCAGAGGCAGGCAGATCTC-TGTG-AGTTCCAGGCT  944
      |||  | ||||| |||||| ||||||||||||| |||| | |||||||||
seq2  GGCTAATGCAGATGGCAGAAGCAGGCAGATCTCTTGTGAATTTCCAGGCT  949

seq1  GGACAGG--ACACCTCAGTGAACC-TCTGTCAAAAAAAAAT-ATATATAT  990
      |||| ||  ||||||||||||||| |||||||||||||||| ||||||||
seq2  GGACCGGGCACACCTCAGTGAACCTTCTGTCAAAAAAAAATAATATATAT  999

seq1  G-ATGCAAATAAAAACAATTGC  1011
      | ||||||||||| | ||||||
seq2  GAATGCAAATAAACA-AATTGC  1020


seq1: chr14_124284855_124285771
seq2: B6Ng01-182D15.g_62_979 (reverse)

seq1  CACATACACATACACATACACATACACATATACATATACACGTACATATA  50
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATACACATACACATACACATATACATATACACGTACATATA  50

seq1  CATATATATATAAATACTTTTAAGTTTGTATAGTGCTACCTGTATGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATAAATACTTTTAAGTTTGTATAGTGCTACCTGTATGTGTG  100

seq1  TTTTTAGGGCTATTTGGCATTGAATAACAAATTGATGTGCACTTTCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGGGCTATTTGGCATTGAATAACAAATTGATGTGCACTTTCTTTG  150

seq1  GAAAGGTCAAACTTTCTTTCTTTC-TTTTTTTTTTTCTGATACTAGAAGG  199
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAAAGGTCAAACTTTCTTTCTTTCTTTTTTTTTTTTCTGATACTAGAAGG  200

seq1  TTCCATGCAAGATCAGTCTCTTTGAACTAAGGATCACTTGCAGGGAATCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGCAAGATCAGTCTCTTTGAACTAAGGATCACTTGCAGGGAATCC  250

seq1  ACGACCTGGTTCACAGCATGGCTTCTTCTCTGGTTCAAAATCTTTCAATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACCTGGTTCACAGCATGGCTTCTTCTCTGGTTCAAAATCTTTCAATG  300

seq1  GAAAATACACTCTTGGGAGTTGTCCCATGAGTTAAGTTCTGGATTCGGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATACACTCTTGGGAGTTGTCCCATGAGTTAAGTTCTGGATTCGGCA  350

seq1  GCAGGACTCTGTAAAGAAAAAAGAAAACTAAATCTGAAATTAGGTCAAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACTCTGTAAAGAAAAAAGAAAACTAAATCTGAAATTAGGTCAAAG  400

seq1  TGGTGTGCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTCAGTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTCAGTGT  450

seq1  TTTCTCTGAACTTGTGGGCTAATGCCAAAAGTAGTGTGGGTGTTTCCATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGAACTTGTGGGCTAATGCCAAAAGTAGTGTGGGTGTTTCCATC  500

seq1  ATTTATACTACTTTGTATGAAGGACAATATACTATAGTCACATTTTACAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATACTACTTTGTATGAAGGACAATATACTATAGTCACATTTTACAG  550

seq1  TGCTTTCATTATTAATAATCTTTAACTTTGTAAATCACTGATGGTTGTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCATTATTAATAATCTTTAACTTTGTAAATCACTGATGGTTGTTA  600

seq1  TTATTATCAAGGTGGATGTTATTCTCCAATTAATTTCTGTGTGTTTAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATCAAGGTGGATGTTATTCTCCAATTAATTTCTGTGTGTTTAATT  650

seq1  TTTAAAATAAATCACTAAAAAATTCACAAAAATAGAAAAAAATGAAGATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATAAATCACTAAAAAATTCACAAAAATAGAAAAAAATGAAGATA  700

seq1  ATGTTAATTATTTCTATTTGATCCTATGACAAAGCAAGCCGATATTGGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAATTATTTCTATTTGATCCTATGACAAAGCAAGCCGATATTGGTA  750

seq1  TATTAGCAATAACTTATGAGAATATTTCAAAGATTACTTCTTATGTTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCAATAACTTATGAGAATATTTCAAAGATTACTTCTTATGTTTTT  800

seq1  CTAGACTAACAATAACTTACTTTAAAAAATAAAGTTATTTATCAAGATTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACTAACAATAACTTACTTTAAAAAATAAAGTTATTTATCAAGATTG  850

seq1  TTTTTTGAGACATGGTTCATAGCCTAGGCTAGATTAAAACTCATTAAGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAGACATGGTTCATAGCCTAGGCTAGATTAAAACTCATTAAGGT  900

seq1  GAAGCTAGTCTTGAATTC  917
      ||||||||||||||||||
seq2  GAAGCTAGTCTTGAATTC  918


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