BAC Information

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BAC

Clone NameB6Ng01-183H01
Chromosome14 (Build37)
Map Location 89,299,996 - 89,300,633
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043317, LOC100043780, LOC668624, LOC668625, Pcdh20
Downstream geneEG328451
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183H01.bB6Ng01-183H01.g
ACCGA009064GA009065
length1,210888
definitionB6Ng01-183H01.b B6Ng01-183H01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacttgacaaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccaataaa
atcagggacaaaacaaggctgtccactctctccctacctattcaacattg
tacttgaagtcctagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaattcctaggcc
tgataaacagcttcaatgaagtagctggatataaaattaacttaagcaag
tcaatggcctttctgtacacaaaggataaacaggctgagaaaaaaattag
ggaaacaacactcttctcaatagtcacaaataatataaaataccttggcg
tgactctaactaaggaagtgaaagatctgtatgataagaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatagaacgatctcccatg
ctcatggattggcaggatcaatatagtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaactagaaagggcaataggcagattcatctggaataacaaaaaacc
taggatagaaaaaactctcctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagttatactacagagcaattgtgattaaaaactgc
atggtactggtatagtgacagacaagtaaaccaatggaatagaattgaag
acccagagatgaacccacacacctatggtcactttgatctttgacaggga
gctaaaaccatccagtggaaaaaaagacagcatttttcaaaaaatgttgc
tggcacaactggccggttattcatgtagaagaatgggaaattgatccatt
tctatctcccttttcctaaggtcaattctaagtggattaaggaacttcca
cattaaacccagagaacactgaaacgttatagaaggaagaaaaaataggg
aaaaaccttccaagatattggtacaaagaaagtaccttgaatagacgcca
attgcctggcttagaattcgagaatcattaaattgggaacctctcattaa
aattggctca
gaattctataaagtctttaatttcttgctttctttcttccagaaccaagt
tatcattgagtagagaattcagtttctatgagtatgtgggctttcttttg
tattatttttattaaagaccagccttagtccctggttatctgatacaatg
catggggttatttcagtctgccatatctgttaggacttattttgtgcaca
attatatagtcagttttgcagaaggtaccatgaagtgctgagaagaaggt
atattcttcttcttctttcttcttcttcttcttcttcttcttcttctttc
ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct
tcttcttcttcttcgtcgttgagggaaatatcatgaagatatccgctaaa
tacattaataataatatttctcctaggttcactctgtctctttttaggtt
ctgttgcagttgcctgtccattgttaagagtagggtgctgaagtctccca
ctgttcttccgtgagcttcaatgtgtgttttgacctttagtaaagattct
tttatcgacgttgatattcttgtacctggtgcacatataattacacttga
gacttcattttgtaaggttgcctgtggtgctgtgtaatgtccctcgctag
ctctttgatacttttgggtgaagtctgtttatgtatattagaatggctac
tcactgttatgtctgatcttctccagagatcctgaagtcacttatctgct
ctcttagagtctctatctctgaagatcattatgacagatactatgtagct
acagaagtatacacagactcctggtatctttatgagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_89299996_89300633
seq2: B6Ng01-183H01.g_356_951

seq1  CTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  50
      |||||      |||||||||||||||||||||||||||||||||||||||
seq2  CTTCT------TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  44

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  94

seq1  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGAGTGAAATATCCTGT  150
      |||||||||||||||||||||||||||| || ||||| |||||||| || 
seq2  CTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCGTTGAGGGAAATATCATGA  144

seq1  AGATATCCGTTAAATACATTTGGCTTATAATTTCTCCTAGTTTCACTCTG  200
      ||||||||| ||||||||||     ||  ||||||||||| |||||||||
seq2  AGATATCCGCTAAATACATTAATAATAATATTTCTCCTAGGTTCACTCTG  194

seq1  TCTCTTTTTAGGTTCTGTTTCAATTTCCTGTCCATTGTTAAGAGTAGGGT  250
      ||||||||||||||||||| || || ||||||||||||||||||||||||
seq2  TCTCTTTTTAGGTTCTGTTGCAGTTGCCTGTCCATTGTTAAGAGTAGGGT  244

seq1  GCTGAAGTCTCCCACTGTTCTTCCGTGAGCTTCAATGTGTGTTTTGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGTCTCCCACTGTTCTTCCGTGAGCTTCAATGTGTGTTTTGACCT  294

seq1  TTAGTAAAGTTTCTTTTATCGACGTTGATATTCTTGCACCTGGTGCACAT  350
      ||||||||| |||||||||||||||||||||||||| |||||||||||||
seq2  TTAGTAAAGATTCTTTTATCGACGTTGATATTCTTGTACCTGGTGCACAT  344

seq1  ATATTTACACTTGAGACTTCATCTTTGTAAAGTTTTCCTTTGGTGCTTTT  400
      ||| |||||||||||||||||| ||||| ||| || ||| |||||| | |
seq2  ATAATTACACTTGAGACTTCAT-TTTGT-AAGGTTGCCTGTGGTGC-TGT  391

seq1  GTAATGTCCCTCGCTAGCTCTTTTGATAACTTTTGGTTGAAAGTCTGTTT  450
      |||||||||||||||||||| |||||| |||||||| || ||||||||||
seq2  GTAATGTCCCTCGCTAGCTC-TTTGAT-ACTTTTGGGTG-AAGTCTGTTT  438

seq1  TATTGTATATTAGAATGGCTACTTCAACTTGTTTATGTCTGAATCTTTCT  500
         ||||||||||||||||||||   |||   ||||||||| ||| ||||
seq2  --ATGTATATTAGAATGGCTACT--CACT--GTTATGTCTG-ATC-TTCT  480

seq1  CCAGAGATCCTGAAGTTAACTTTATCTGGCTCTCTTTAAAAGTCTTCTTT  550
      |||||||||||||||| |   |||||| ||||||||  | |||| |||  
seq2  CCAGAGATCCTGAAGTCA--CTTATCT-GCTCTCTT--AGAGTC-TCT--  522

seq1  ATTCTCTGAAGATCATTATGAACAGATAACTATGTAGCTACAGGAGGTTA  600
        |||||||||||||||||| |||||| ||||||||||||||| ||  ||
seq2  -ATCTCTGAAGATCATTATG-ACAGAT-ACTATGTAGCTACAGAAG--TA  567

seq1  TACACCAAGAACCTTCCTTGGGTATCTTTTTATGAGCA  638
      |||||  |||    ||||  ||||||  ||||||||||
seq2  TACAC--AGA---CTCCT--GGTATC--TTTATGAGCA  596