BAC Information

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BAC

Clone NameB6Ng01-183M11
Chromosome14 (Build37)
Map Location 123,730,694 - 123,731,776
singlet/doubletsinglet
Overlap geneVgcnl1
Upstream geneClybl, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca, BC006662, 4930594M22Rik, Tmtc4
Downstream geneItgbl1, LOC668700, Fgf14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183M11.bB6Ng01-183M11.g
ACCGA009319GA009320
length3881,086
definitionB6Ng01-183M11.b B6Ng01-183M11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cttgttcagttctgagccccattttttaagggggttatttgattttctga
ggtccaccttcttgagttctttatatttgttggatattagtcccctatct
gatttaggataggtaaagatcctttcccagtctgttggtggtctttttgt
cttatagacagtgtcttttgccttgcagaaactttggagtttcattaggt
cccatttgtcaattctcgatcttacagcacaagccattgctgttctgttc
aggaatttttcccctgtgcccatatcttcaaggcttttccccactttctc
ctctataagtttcagtgtctctggatttatgtgaagttccttgatccact
tagatttgaccttattacaaggagataagtatggatcg
gaattcaggagtgtctacccataacctgacaaatggatctgcacattaaa
gggatggatgtcctttaatgacaagttataatttgtcattttaaaatttt
cactagtctttatgtgttgggatcattgaaggatacaaggaaaatagtct
cagaaagaaaatgtccatttacttgctgtttagagaaaaagcacagctga
tcatatagagaaagcaatttggtcttcaaacacagtctctatttctttga
ggaattatgagatagagtggaagagccaaggtcttcagtatcttgcctgc
atctttctctaatagaaaatttgagaatgctgtgcagttttctgggtgaa
ttggtggaaaaccatgcaaacaaagatgttcttagaaagtccatctagtg
gcttaatattaacaacaacaaaacaacaacaacaacaaaaaccccaagcc
tgcctggcttctgaaagtgagaggcacaaggctctgtctagtgaaaaata
atgaagtcttttgtcttgtgtgagtgaggagacccgccattatgcaggcc
tatgtaatctctttattcctgttccctggaggagaattatagagaggcat
tttccttttcccagttggggttaatgttatgccctctctacctttgaaag
taaaacaagatgaggacccctgatgatgactcaaatgtgggaatattcct
cagcaaacacacattcccagttgcaaaaatattacccctggtttcttgcc
aagcctttgaaaaaaacatatgaaagattgattcttttcccccctcccca
cattgcctttgtggtgtggaatttcaaatgccccttatatgacagccaca
tatataatcttttctaggaacagagaatcgtgtcttaagagatctctatt
tttcttgacatttatccaccaaaaattattttttaaattggcccaaagat
gatgagtataagagggatctttggagttttattagcttttaaacccccac
tagttgtttataagacacagtagcaagggtcctctgtttccttttctttg
tttctatgtcttcttctaatgttcagagcaagggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_123730694_123731776
seq2: B6Ng01-183M11.g_66_1151

seq1  GAATTCAGGAGTGTCTACCCATAACCTGACAAATGGATCTGCACATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGTGTCTACCCATAACCTGACAAATGGATCTGCACATTAAA  50

seq1  GGGATGGATGTCCTTTAATGACAAGTTATAATTTGTCATTTTAAAATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGATGTCCTTTAATGACAAGTTATAATTTGTCATTTTAAAATTTT  100

seq1  CACTAGTCTTTATGTGTTGGGATCATTGAAGGATACAAGGAAAATAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGTCTTTATGTGTTGGGATCATTGAAGGATACAAGGAAAATAGTCT  150

seq1  CAGAAAGAAAATGTCCATTTACTTGCTGTTTAGAGAAAAAGCACAGCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAAAATGTCCATTTACTTGCTGTTTAGAGAAAAAGCACAGCTGA  200

seq1  TCATATAGAGAAAGCAATTTGGTCTTCAAACACAGTCTCTATTTCTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGAGAAAGCAATTTGGTCTTCAAACACAGTCTCTATTTCTTTGA  250

seq1  GGAATTATGAGATAGAGTGGAAGAGCCAAGGTCTTCAGTATCTTGCCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTATGAGATAGAGTGGAAGAGCCAAGGTCTTCAGTATCTTGCCTGC  300

seq1  ATCTTTCTCTAATAGAAAATTTGAGAATGCTGTGCAGTTTTCTGGGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTCTAATAGAAAATTTGAGAATGCTGTGCAGTTTTCTGGGTGAA  350

seq1  TTGGTGGAAAACCATGCAAACAAAGATGTTCTTAGAAAGTCCATCTAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGAAAACCATGCAAACAAAGATGTTCTTAGAAAGTCCATCTAGTG  400

seq1  GCTTAATATTAACAACAACAAAACAACAACAACAACAAAAACCCCAAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATATTAACAACAACAAAACAACAACAACAACAAAAACCCCAAGCC  450

seq1  TGCCTGGCTTCTGAAAGTGAGAGGCACAAGGCTCTGTCTAGTGAAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCTTCTGAAAGTGAGAGGCACAAGGCTCTGTCTAGTGAAAAATA  500

seq1  ATGAAGTCTTTTGTCTTGTGTGAGTGAGGAGACCCGCCATTATGCAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTCTTTTGTCTTGTGTGAGTGAGGAGACCCGCCATTATGCAGGCC  550

seq1  TATGTAATCTCTTTATTCCTGTTCCCTGGAGGAGAATTATAGAGAGGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATCTCTTTATTCCTGTTCCCTGGAGGAGAATTATAGAGAGGCAT  600

seq1  TTTCCTTTTCCCAGTTGGGGTTAATGTTATGCCCTCTCTACCTTTGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTCCCAGTTGGGGTTAATGTTATGCCCTCTCTACCTTTGAAAG  650

seq1  TAAAACAAGATGAGGACCCCTGATGATGACTCAAATGTGGGAATATTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAGATGAGGACCCCTGATGATGACTCAAATGTGGGAATATTCCT  700

seq1  CAGCAAACACACATTCCCAGTTGCAAAAATATTACCCCTGGTTTCTTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAACACACATTCCCAGTTGCAAAAATATTACCCCTGGTTTCTTGCC  750

seq1  AAGCCTTTGAAAAAAACATATGAAAGATTGATTCTTTTCCCCCCTCCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTGAAAAAAACATATGAAAGATTGATTCTTTTCCCCCCTCCCCA  800

seq1  CATTGCCTTTGTGGTGTGGAATTTCAAATGCCCCTTATATGACAGCCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCTTTGTGGTGTGGAATTTCAAATGCCCCTTATATGACAGCCACA  850

seq1  TATATAATCTTTTCTAGGAACAGAGAATCGTGTCTTAAGAGATCTCTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAATCTTTTCTAGGAACAGAGAATCGTGTCTTAAGAGATCTCTATT  900

seq1  TTTCTTGACATTTATCCACCAAAAAT--ATTTTTAAATTGGCCCAAAGAT  948
      ||||||||||||||||||||||||||   |||||||||||||||||||||
seq2  TTTCTTGACATTTATCCACCAAAAATTATTTTTTAAATTGGCCCAAAGAT  950

seq1  GATGAGTATAAGAGGGATCTTTGGAGTTTTATTAGCTTTTAAA-CACCAC  997
      ||||||||||||||||||||||||||||||||||||||||||| | ||||
seq2  GATGAGTATAAGAGGGATCTTTGGAGTTTTATTAGCTTTTAAACCCCCAC  1000

seq1  TAGTTGTTTAT-AGACACAGTAGCAGGGGTCCTCTGTT--CCTTTCTTTG  1044
      ||||||||||| ||||||||||||| ||||||||||||  | ||||||||
seq2  TAGTTGTTTATAAGACACAGTAGCAAGGGTCCTCTGTTTCCTTTTCTTTG  1050

seq1  TTTCTATGTCTTCTTTCTTAATGTTCCAGAGCAAGGGTG  1083
      |||||||||||||||   ||||||| |||||||||||||
seq2  TTTCTATGTCTTCTT--CTAATGTT-CAGAGCAAGGGTG  1086