BAC Information

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BAC

Clone NameB6Ng01-184A07
Chromosome14 (Build37)
Map Location 24,842,521 - 24,843,738
singlet/doubletsinglet
Overlap genenone
Upstream gene1700112E06Rik, Kcnma1
Downstream geneLOC620499, Dlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24, LOC669315
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184A07.bB6Ng01-184A07.g
ACCGA009499GA009500
length1,214602
definitionB6Ng01-184A07.b B6Ng01-184A07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtttcccaacgctgtttcaaacaagtccggagtccctttaaa
aaatgtgttacattcttttaattatttttagttagggttttacatcatcc
atccagaaaaggatgaaggtcctatgtatgtctaccaaacacagcatatt
aagttgcagtaagacttggcacctccccttgtattaaggtgaaaagggta
gcccagtacgaggacaaaggtccccaaagctgacagaagagtcagagaca
gcccctgctcctacaacaagtctgagctgagcaactgtagacatcaaggc
agaggatccacgtcagacccatgcagacactctgattatcagttcagtct
ttgtgagcccctatgagccccaggctagttggttctgtggggtttcttgt
ggtgtccttgggaagagggggtccttttggttttgaatattgtttagcag
cttcttcatgcaagatcccagcagcatcaataacatggcaagcaaaaata
tctccacaggtggccaggtcggaacccggctgagaaccactgctctgacg
ctctgacaggatgctcacatccgttgtggacaggagtttagctttttctc
ttggtccttccaccacacatgctttcttcctcctgtccttgatcagaaaa
gtatcaccttccttccactgagaccttctctcctggaacccctctctctc
atgtcctcgcttgctgatgtcccctccggacctttgcttcactctacctc
agcatccacaagaaggttgacctgaagcctcaactgatgattctgttttg
agcttccaaggatccaggacaaaacttcattctagcaagcatccccaggg
accaattcagtacatggcatatagctacacccaggtggcatttcttaatt
ggtcctgaacaggagacctacatagctaaaagcagactatgcaacgagtg
ctctctgaagggctggcacatcctggcctgatggttgactgtgaatgggc
ctcaatctttctgactgagagaacagcctgggggctagaagatgcttcag
tagggaaagtgcatactgcacacacagagggctgaagctggaatccctgg
ccattcatgttgaagctgagcaatcagaatggatatatctttaaccccaa
gcctcatggtggccagaaaaaatggaatcttggggctaactctcagtcag
caagaatgcctctg

gaattctccattcaacagaagacaggaaagcgaaaagaagagccaagaca
cctcaagtaaaatgacccaaaaaagagagaaaaaaattggcacagtttgc
ctgtaatcttaataaacataaatggattaaatttccctgtttgaagatag
aaatcatcagacaagattttcaaattaaacaaaattagttacaaggcaca
tctaaaacccagccttaataattgggcacacctgtgagggatttctgctt
aatttgaagtggggtaatctacttctaaactggatctctgaggtagaaaa
acacacctctaatccaggtctattctgagccacaccttctgctggaagtc
taaataaggacatggaagaaggaagcctttgcccttttgcctgtttgctc
tcaccttgctagcaagtccattacatccctggcattagagcctgcttctt
cgggagcccagcagaatctaaagaccctctgtgacatccagccctgtgta
ctgagcaactactgcgttcttgaacctgccattcatagccagccattgtt
tgtgtaagtcattcttagtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_24842521_24843738
seq2: B6Ng01-184A07.b_48_1261 (reverse)

seq1  CAGA-GCATTCTTGCTGGACTGGAGAGTAAGCCCCAGGATCCACTTTTTT  49
      |||| ||||||||||| |||| |||||| ||||||| ||| |  ||||||
seq2  CAGAGGCATTCTTGCT-GACT-GAGAGTTAGCCCCAAGATTCCATTTTTT  48

seq1  CTGCCCACCCTTGAGGCCTGGGGTTAAAGATAT-CCAATTCTGA-TGCTC  97
      ||| ||| || |||||| |||||||||||||||  | ||||||| |||||
seq2  CTGGCCA-CCATGAGGCTTGGGGTTAAAGATATATCCATTCTGATTGCTC  97

seq1  AGCTTCCACATGAAT-GCCAGGGA-TCCAGCTTCAGGCCCTCCTGTGTGT  145
      |||||| |||||||| |||||||| |||||||||| ||||| ||||||||
seq2  AGCTTCAACATGAATGGCCAGGGATTCCAGCTTCA-GCCCT-CTGTGTGT  145

seq1  GCAGTATGCACTTTCCCTACTGAGGCATCTTCCTAG-CCCCAGGCTTGTT  194
      ||||||||||||||||||||||| ||||||| |||| |||||||| ||||
seq2  GCAGTATGCACTTTCCCTACTGAAGCATCTT-CTAGCCCCCAGGC-TGTT  193

seq1  CTTCTCAGTTCAGAAAGATTGAGGCCCATTCACAGTCAACCATCCAGGCC  244
      | |||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  C-TCTCAG-TCAGAAAGATTGAGGCCCATTCACAGTCAACCAT-CAGGCC  240

seq1  AGGATGTGCCAGCCCTTCAGAGAGCACTCGTTGCATAGTCTGCTTTTAGC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGCCAGCCCTTCAGAGAGCACTCGTTGCATAGTCTGCTTTTAGC  290

seq1  TATGTAGGTCTCCTGTTCAGGACCAATTAAGAAATGCCACCTGGGTGTAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGGTCTCCTGTTCAGGACCAATTAAGAAATGCCACCTGGGTGTAG  340

seq1  CTATATGCCATGTACTGAATTGGTCCCTGGGGATGCTTGCTAGAATGAAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGCCATGTACTGAATTGGTCCCTGGGGATGCTTGCTAGAATGAAG  390

seq1  TTTTGTCCTGGATCCTTGGAAGCTCAAAACAGAATCATCAGTTGAGGCTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCCTGGATCCTTGGAAGCTCAAAACAGAATCATCAGTTGAGGCTT  440

seq1  CAGGTCAACCTTCTTGTGGATGCTGAGGTAGAGTGAAGCAAAGGTCCGGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAACCTTCTTGTGGATGCTGAGGTAGAGTGAAGCAAAGGTCCGGA  490

seq1  GGGGACATCAGCAAGCGAGGACATGAGAGAGAGGGGTTCCAGGAGAGAAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACATCAGCAAGCGAGGACATGAGAGAGAGGGGTTCCAGGAGAGAAG  540

seq1  GTCTCAGTGGAAGGAAGGTGATACTTTTCTGATCAAGGACAGGAGGAAGA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGTGGAAGGAAGGTGATACTTTTCTGATCAAGGACAGGAGGAAGA  590

seq1  AAGCATGTGTGGTGGAAGGACCAAGAGAAAAAGCTAAACTCCTGTCCACA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGTGTGGTGGAAGGACCAAGAGAAAAAGCTAAACTCCTGTCCACA  640

seq1  ACGGATGTGAGCATCCTGTCAGAGCGTCAGAGCAGTGGTTCTCAGCCGGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGATGTGAGCATCCTGTCAGAGCGTCAGAGCAGTGGTTCTCAGCCGGG  690

seq1  TTCCGACCTGGCCACCTGTGGAGATATTTTTGCTTGCCATGTTATTGATG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGACCTGGCCACCTGTGGAGATATTTTTGCTTGCCATGTTATTGATG  740

seq1  CTGCTGGGATCTTGCATGAAGAAGCTGCTAAACAATATTCAAAACCAAAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGGATCTTGCATGAAGAAGCTGCTAAACAATATTCAAAACCAAAA  790

seq1  GGACCCCCTCTTCCCAAGGACACCACAAGAAACCCCACAGAACCAACTAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCCCTCTTCCCAAGGACACCACAAGAAACCCCACAGAACCAACTAG  840

seq1  CCTGGGGCTCATAGGGGCTCACAAAGACTGAACTGATAATCAGAGTGTCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGCTCATAGGGGCTCACAAAGACTGAACTGATAATCAGAGTGTCT  890

seq1  GCATGGGTCTGACGTGGATCCTCTGCCTTGATGTCTACAGTTGCTCAGCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGTCTGACGTGGATCCTCTGCCTTGATGTCTACAGTTGCTCAGCT  940

seq1  CAGACTTGTTGTAGGAGCAGGGGCTGTCTCTGACTCTTCTGTCAGCTTTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTGTTGTAGGAGCAGGGGCTGTCTCTGACTCTTCTGTCAGCTTTG  990

seq1  GGGACCTTTGTCCTCGTACTGGGCTACCCTTTTCACCTTAATACAAGGGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTTTGTCCTCGTACTGGGCTACCCTTTTCACCTTAATACAAGGGG  1040

seq1  AGGTGCCAAGTCTTACTGCAACTTAATATGCTGTGTTTGGTAGACATACA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCCAAGTCTTACTGCAACTTAATATGCTGTGTTTGGTAGACATACA  1090

seq1  TAGGACCTTCATCCTTTTCTGGATGGATGATGTAAAACCCTAACTAAAAA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACCTTCATCCTTTTCTGGATGGATGATGTAAAACCCTAACTAAAAA  1140

seq1  TAATTAAAAGAATGTAACACATTTTTTAAAGGGACTCCGGACTTGTTTGA  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAAGAATGTAACACATTTTTTAAAGGGACTCCGGACTTGTTTGA  1190

seq1  AACAGCGTTGGGAAACTTGAATTC  1218
      ||||||||||||||||||||||||
seq2  AACAGCGTTGGGAAACTTGAATTC  1214


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