BAC Information

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BAC

Clone NameB6Ng01-184H01
Chromosome14 (Build37)
Map Location 21,968,760 - 22,099,523
singlet/doubletdoublet
Overlap geneAdk
Upstream geneKcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1
Downstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184H01.bB6Ng01-184H01.g
ACCGA009819GA009820
length1,1131,039
definitionB6Ng01-184H01.b B6Ng01-184H01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,968,760 - 21,969,884)(22,098,506 - 22,099,523)
sequence
gaattctcatttggagatggggaagatgaagtacatgatgtcataatata
cctgaaaatccatgtcttcctgtaaccatctggaaaatcacctcgttctt
tcttagcataatattttgcatgcgtttaggattcatagacccaagagacg
ggaagtgtaactagagtaatcttgactacaaatggaattcagtgatgttt
ccaaactggactcatgtaagaacaggagcttggctgggccttaatggtcc
taaacccaaggactcaggtggccagaagttgtttctcagcttccccatgt
cggttgcaaattaacatcattcctcagttcctgccatgctcaggtgtcac
ctgctgtaatgccctgctcaggtgtcacctgctggaatgccctgctcagg
tgtcacctgctgtaatgggctcatgctagcttgctttcttctcacttgaa
acactatcagtacttccgatagtcagtgttagatgctacatttatattca
agataggcatctagaaaaaaataacccttttataagactaagtatttccc
tattcttctgaagggtaacttcaagtgacgcacctataactgggtttcac
ttgtgtaatggccaaaaccttttcaagtttacactttggatggctttgta
aatttggcatttttttgacaaggttacgtatggcattagcaatttgccta
aagaatgaaaagaaaacgccaactgttttgtttgtttttatgacttgtga
agattttgcattttagttttctgagttcttttcctaaaggcccgggtgtt
tggttttttcttgttgttgctgatcacctcaggagcttcctgggtttggg
gagagtgacccttcacgatctcttttagactaaagagatcgagttttcta
atgttgtgtggaaggttatatttagctgttggtatttcaagttggaacac
ttcattcggctgtacctttagtcaatgagtcatctggagaatggctgcct
cttgctttagaagagtctgtagcaaatatataatagttaagctctgtgga
gatttatgccaataacaagctttaaatggaaatgttttgtacatttattg
gcccatatgcaaa
gaattctctttatatgcagattttaaaaatagatttatttttatttatgg
gtatgcatgtctgtgtgagtggccctgttttccctggagtcagaatgaca
gtaacaacagtaagcagataaatgagcctgataaatgttctgggaaccaa
acttgcatcctctacaagagcaccaagggctcttaaagtttgagctatct
ctccaatcccctgagttttaaactgtctatagcaaaataaataaataaat
aaataaataaataaataaataaatgagtgaatgaaagaaagaaagacagg
gaaaagaaagaaaggcagaaaggcagaaaggcagaaaggcagaaagaaag
aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagacagac
aggaagaaagaaagaaagagaaagaaagaaagaaagaaagaaagaaagaa
aggcagaaagagagaaagagagagagagagagagagagagagagagagag
agagagagagagagagagagagaatggtcgtgtagggagcaggatgtctc
attaggtaatgatatctataactaagtgtgatgagtgtaaagaatcacat
cctacaaactgtcttatgacttctggaactgttccatggcatatgcatat
tccccgcaaataattaataaaaaatttaggaatgtaaaaaagtcattact
gtaatcattatttctgatactgagttaactattctgacatttacttcttt
acaaagaattaattacatccattttatatgaattcctgtcccctacctaa
tttaggagtattaaatttacgcccagtactacctaaatttttaatttctg
acaaatggaaaggaaatacctatgtagttaagtcaattcccagtaggctg
gccacatagttcgtcttctccggccacctcctcttcctgaatttggtgac
ccaaaatgggaatcaggtccatcagattaaaaatgattgtcaaaagcctg
ggatggctcaactcaggaaaggctttcaatttatatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_21968760_21969884
seq2: B6Ng01-184H01.b_43_1155

seq1  GAATTCTCATTTGGAGATGGGGAAGATGAAGTACATGATGTCATAATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTTGGAGATGGGGAAGATGAAGTACATGATGTCATAATATA  50

seq1  CCTGAAAATCCATGTCTTCCTGTAACCATCTGGAAAATCACCTCGTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAATCCATGTCTTCCTGTAACCATCTGGAAAATCACCTCGTTCTT  100

seq1  TCTTAGCATAATATTTTGCATGCGTTTAGGATTCATAGACCCAAGAGACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCATAATATTTTGCATGCGTTTAGGATTCATAGACCCAAGAGACG  150

seq1  GGAAGTGTAACTAGAGTAATCTTGACTACAAATGGAATTCAGTGATGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGTAACTAGAGTAATCTTGACTACAAATGGAATTCAGTGATGTTT  200

seq1  CCAAACTGGACTCATGTAAGAACAGGAGCTTGGCTGGGCCTTAATGGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTGGACTCATGTAAGAACAGGAGCTTGGCTGGGCCTTAATGGTCC  250

seq1  TAAACCCAAGGACTCAGGTGGCCAGAAGTTGTTTCTCAGCTTCCCCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCAAGGACTCAGGTGGCCAGAAGTTGTTTCTCAGCTTCCCCATGT  300

seq1  CGGTTGCAAATTAACATCATTCCTCAGTTCCTGCCATGCTCAGGTGTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTGCAAATTAACATCATTCCTCAGTTCCTGCCATGCTCAGGTGTCAC  350

seq1  CTGCTGTAATGCCCTGCTCAGGTGTCACCTGCTGGAATGCCCTGCTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTAATGCCCTGCTCAGGTGTCACCTGCTGGAATGCCCTGCTCAGG  400

seq1  TGTCACCTGCTGTAATGGGCTCATGCTAGCTTGCTTTCTTCTCACTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCTGCTGTAATGGGCTCATGCTAGCTTGCTTTCTTCTCACTTGAA  450

seq1  ACACTATCAGTACTTCCGATAGTCAGTGTTAGATGCTACATTTATATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATCAGTACTTCCGATAGTCAGTGTTAGATGCTACATTTATATTCA  500

seq1  AGATAGGCATCTAGAAAAAAATAACCCTTTTATAAGACTAAGTATTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGCATCTAGAAAAAAATAACCCTTTTATAAGACTAAGTATTTCCC  550

seq1  TATTCTTCTGAAGGGTAACTTCAAGTGACGCACCTATAACTGGGTTTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTCTGAAGGGTAACTTCAAGTGACGCACCTATAACTGGGTTTCAC  600

seq1  TTGTGTAATGGCCAAAACCTTTTCAAGTTTACACTTTGGATGGCTTTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAATGGCCAAAACCTTTTCAAGTTTACACTTTGGATGGCTTTGTA  650

seq1  AATTTGGCATTTTTTTGACAAGGTTACGTATGGCATTAGCAATTTGCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGCATTTTTTTGACAAGGTTACGTATGGCATTAGCAATTTGCCTA  700

seq1  AAGAATGAAAAGAAAACGCCAACTGTTTTGTTTGTTTTTATGACTTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAAAAGAAAACGCCAACTGTTTTGTTTGTTTTTATGACTTGTGA  750

seq1  AGATTTTGCATTTTAGTTTTCTGAGTTCTTTTCCTAAAGGCCCGGGTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTGCATTTTAGTTTTCTGAGTTCTTTTCCTAAAGGCCCGGGTGTT  800

seq1  TGGTTTTTTCTTGTTGTTGCTGATCACCTCAGGAGCTTCCTGGGTTTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTTCTTGTTGTTGCTGATCACCTCAGGAGCTTCCTGGGTTTGGG  850

seq1  GAGAGTGACCCTTCACGATCTCTTTTAGACTAAAGAGATCGAGTTTTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGACCCTTCACGATCTCTTTTAGACTAAAGAGATCGAGTTTTCTA  900

seq1  ATGTTGTGTGGAAGGTTATATTTAGCTGTTGGTATTTCAAGTTGGAACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTGTGGAAGGTTATATTTAGCTGTTGGTATTTCAAGTTGGAACAC  950

seq1  TTCATTCGGCTGTACCTTTAGTCAATGAGTCATCTGGAGAAAATGGGCTG  1000
      |||||||||||||||||||||||||||||||||||||||||    |||||
seq2  TTCATTCGGCTGTACCTTTAGTCAATGAGTCATCTGGAGAA---TGGCTG  997

seq1  -CTCTTGCTTTTAGGAAGAGTCTGTAGCAAATAATAATAATAAGTTAAGC  1049
       ||||||||||   |||||||||||||||||||   ||||| ||||||||
seq2  CCTCTTGCTTT--AGAAGAGTCTGTAGCAAATA--TATAAT-AGTTAAGC  1042

seq1  TCTGTGGGAGATTTTATGCCAAATAACAAGCTTAAAATGGAAAATGTTTT  1099
      ||||| ||||| |||||||| |||||||||||| |||||| |||||||||
seq2  TCTGT-GGAGA-TTTATGCC-AATAACAAGCTTTAAATGG-AAATGTTTT  1088

seq1  GTAACATTTTATTGCCCATATGCAAA  1125
      || ||||||  | |||||||||||||
seq2  GT-ACATTTATTGGCCCATATGCAAA  1113

seq1: chr14_22098506_22099523
seq2: B6Ng01-184H01.g_64_1102 (reverse)

seq1  AAGATATAAA-TGAAGCCCTTTCCTGAGTTGA--CAT-CCAG--CTTTGA  44
      |||||||||| ||||  |||||||||||||||  ||| ||||   |||||
seq2  AAGATATAAATTGAAAGCCTTTCCTGAGTTGAGCCATCCCAGGCTTTTGA  50

seq1  CATTCATTTTT-ATCTGAT-GACCTGAT--CCATTTT-GGTCAACAAA-T  88
      || |||||||| ||||||| ||||||||  ||||||| ||||| |||| |
seq2  CAATCATTTTTAATCTGATGGACCTGATTCCCATTTTGGGTCACCAAATT  100

seq1  CAGGAAGA-GAGGTGGGCGGAG-AGACG-ACTATGTGGCCAGCCTACTGG  135
      |||||||| ||||||| ||||| ||||| |||||||||||||||||||||
seq2  CAGGAAGAGGAGGTGGCCGGAGAAGACGAACTATGTGGCCAGCCTACTGG  150

seq1  --AATGACTT-ACTACATAGGTATTTCC-TTCCATTTGTCAGAAATT-AA  180
        | |||||| ||||||||||||||||| |||||||||||||||||| ||
seq2  GAATTGACTTAACTACATAGGTATTTCCTTTCCATTTGTCAGAAATTAAA  200

seq1  AATTTA-GTAGTACTGGGCGTAAA-TTAATACTCCTAAATTAGGTA-GGG  227
      |||||| ||||||||||||||||| ||||||||||||||||||||| |||
seq2  AATTTAGGTAGTACTGGGCGTAAATTTAATACTCCTAAATTAGGTAGGGG  250

seq1  ACA-GAATTCATAT-AAATGGATGTAATTAATTCTTTGTAAAGAAGTAAA  275
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACAGGAATTCATATAAAATGGATGTAATTAATTCTTTGTAAAGAAGTAAA  300

seq1  TGTCAGAATAGTTAACTCAGTATCAGAAATAATGATTACAGTAATGACTT  325
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAATAGTTAACTCAGTATCAGAAATAATGATTACAGTAATGACTT  350

seq1  TTTTACATTCCTAAATTTTTTATTAATTATTTGCGGGGAATATGCATATG  375
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATTCCTAAATTTTTTATTAATTATTTGCGGGGAATATGCATATG  400

seq1  CCATGGAACAGTTCCAGAAGTCATAAGACAGTTTGTAGGATGTGATTCTT  425
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAACAGTTCCAGAAGTCATAAGACAGTTTGTAGGATGTGATTCTT  450

seq1  TACACTCATCACACTTAGTTATAGATATCATTACCTAATGAGACATCCTG  475
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTCATCACACTTAGTTATAGATATCATTACCTAATGAGACATCCTG  500

seq1  CTCCCTACACGACCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  525
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTACACGACCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  550

seq1  TCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTTTCTGCCTTTCTTTCTTTC  575
      |||||||||||||||||||||||||||||||||||||    |||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTTTCTGC----CTTTCTTTC  596

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTCCTGTCTGTC  625
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTCCTGTCTGTC  646

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  675
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  696

seq1  TCTGCCTTTCTGCCTTTCTGCCTTTCTGCCTTTCTTTCTTTTCCCTGTCT  725
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTTCTGCCTTTCTGCCTTTCTGCCTTTCTTTCTTTTCCCTGTCT  746

seq1  TTCTTTCTTTCATTCACTCATTTATTTATTTATTTATTTATTTATTTATT  775
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCATTCACTCATTTATTTATTTATTTATTTATTTATTTATT  796

seq1  TATTTATTTTGCTATAGACAGTTTAAAACTCAGGGGATTGGAGAGATAGC  825
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTGCTATAGACAGTTTAAAACTCAGGGGATTGGAGAGATAGC  846

seq1  TCAAACTTTAAGAGCCCTTGGTGCTCTTGTAGAGGATGCAAGTTTGGTTC  875
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTTTAAGAGCCCTTGGTGCTCTTGTAGAGGATGCAAGTTTGGTTC  896

seq1  CCAGAACATTTATCAGGCTCATTTATCTGCTTACTGTTGTTACTGTCATT  925
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACATTTATCAGGCTCATTTATCTGCTTACTGTTGTTACTGTCATT  946

seq1  CTGACTCCAGGGAAAACAGGGCCACTCACACAGACATGCATACCCATAAA  975
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCCAGGGAAAACAGGGCCACTCACACAGACATGCATACCCATAAA  996

seq1  TAAAAATAAATCTATTTTTAAAATCTGCATATAAAGAGAATTC  1018
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAAATCTATTTTTAAAATCTGCATATAAAGAGAATTC  1039