BAC Information

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BAC

Clone NameB6Ng01-185E06
Chromosome14 (Build37)14 (Build37)
Map Location 6,642,320 - 6,642,8556,030,375 - 6,031,293
singlet/doubletsingletsinglet
Overlap geneLOC100041456
Upstream geneEG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287, LOC100041299, LOC666637, EG622640, LOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848
Downstream geneLOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185E06.bB6Ng01-185E06.g
ACCGA010425GA010426
length1,076920
definitionB6Ng01-185E06.b B6Ng01-185E06.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(6,642,320 - 6,642,855)(6,030,375 - 6,031,293)
sequence
gaattcttttgtgattgggttacctcactcaggatgatgccctccaggtc
catccatttggctaggaatttcataaattcattctttttaatagctgagt
agtactccattgtgtaaatgtaccacattttctgtatccattcctctgtt
gaggggcatctgggttatttccagcttctggctataataaataaggctgc
tatgaacatagtggagcatgtgtccttcttaccagttggaacatcttctg
gatatatgcccaggagtggtattctgggatcctccagtagtcctatgtcc
aattttctgaggaactgccagactgatttccagagtggttgtacaagctt
gcaatcccaccaacaacggagaaatgttcctttttctccacatccttgcc
agcatctgctgtcaccagaatttttgatcttagccattctgactggtgtg
aagtagaatctcagggttgttttgatttgcatttccctgatgattaagaa
tgctgaacatttttcaagtgcttctctgccatttggtattcctcaggtga
caattctttgtttagctctgagccccactttttaatggtgttattggatt
ttctgaagtccaccttcttgtgttctttatacatattggttattagtccc
ctatccgatttgggatcggtaaagatcctttccaaacctattggtggcct
ttttgtcttattgacggtgtcttttgctttacagaagctttgcagtttca
tgaggtaccatttgtccattctcaatcttacagcacagccattcctgttc
tattcaggaactttccccctgtgcccatatctttctatgcttttccccac
tttctcctctataagttttcatgggtctctgggttttatgtggaatttcc
ttgatccactttagatttgacctttagtacaaaggagatagggaatggga
tccattttcccatttcttcctaccatgttaacccgcccagtagttgccag
caccatggtttgattttgcacttccttgtgtgcactttccttggtgcttt
aggaataacaaaacccttaatcataa
gaattctccagctttggaaggagaggttgccaaaggggatcccacggatc
catgagaggctccaggagaggcaccccagaaaaggatcaagctggggaga
actagttaacaggtaggtcatggcagttgctagtgacatcatcagtaatg
ccttccttggagaatctcttgtatctcggagagaactagaatcttctgcg
ttgtcacctgtgttgtggtgacagcaactgcctgtggttcatcccttctg
tttgctctgggttcaccagcaggaatgttttcctggctgctcaggctatg
tcagaaagagaatggcgatgaaggagagaccagaccaacagagaaggaag
agggaatcctttctcatgaaaaaggaagaaggaaatggttatggagaatg
cacagtgagtcctgggcagagttggggaacttcctggtagaggtaggctt
gagctgggccgtccaggagtaggtcttacaagctgaagccttggactttg
tcaatgtcagacaaagattcaagaattttctgatgattagtttgacagag
ccaggaattgacaaacctgcagctacttttctgggagctatttaatttca
ttttgagtggcaaagaatgccaggagtgggcactattggaatatcagtgt
gttattccttttcatggaagggagttgaagcacttcaccttccagattac
tgtaggtactttgagtctctgatgaaaacaacagagaaggatgctcccct
ggtcatgtcatgtggtgaggactcagacactttggattaattagtgcttg
atagtgctaagcactatgaacttcaggatttccctgcaacacatctgata
tgaacctgacaatgtccccatacctttatgtctgatgtaaattatagatt
tcagggcaagggtcctgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_6642320_6642855
seq2: B6Ng01-185E06.b_557_1116

seq1  AAGTGCTTCTCTGCCATTTGGTATTCCTCAGGTGACAATTCTTTGTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTTCTCTGCCATTTGGTATTCCTCAGGTGACAATTCTTTGTTTAG  50

seq1  CTCTGAGCCCCACTTTTTAATGGTGTTATTGGATTTTCTGAAGTCCACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGCCCCACTTTTTAATGGTGTTATTGGATTTTCTGAAGTCCACCT  100

seq1  TCTTGTGTTCTTTATACATATTGGTTATTAGTCCCCTATCCGATTTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGTTCTTTATACATATTGGTTATTAGTCCCCTATCCGATTTGGGA  150

seq1  TCGGTAAAGATCCTTTCCAAACCTATTGGTGGCCTTTTTGTCTTATTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTAAAGATCCTTTCCAAACCTATTGGTGGCCTTTTTGTCTTATTGAC  200

seq1  GGTGTCTTTTGCTTTACAGAAGCTTTGCAGTTTCATGAGGTACCATTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTTTTGCTTTACAGAAGCTTTGCAGTTTCATGAGGTACCATTTGT  250

seq1  CCATTCTCAATCTTACAGCACAAGCCATTCCTGTTCTATTCAGGAACTTT  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCATTCTCAATCTTACAGCAC-AGCCATTCCTGTTCTATTCAGGAACTTT  299

seq1  CCCCCTGTGCCCATATC-TTCTATGCTTTTCCCCACTTTCTCCTCTATAA  349
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCCCCTGTGCCCATATCTTTCTATGCTTTTCCCCACTTTCTCCTCTATAA  349

seq1  G-TTTCAT-GGTCTCT-GGTTTTATGTGGAA-TTCCTTGATCCAC-TTAG  394
      | |||||| ||||||| |||||||||||||| ||||||||||||| ||||
seq2  GTTTTCATGGGTCTCTGGGTTTTATGTGGAATTTCCTTGATCCACTTTAG  399

seq1  ATTTGACC-TTAGTAC-AAGGAGATA-GGAAT-GGATCAA--TTCCCA-T  437
      |||||||| ||||||| ||||||||| ||||| ||||| |  |||||| |
seq2  ATTTGACCTTTAGTACAAAGGAGATAGGGAATGGGATCCATTTTCCCATT  449

seq1  TCTT-CTA-CATGTTAACC--GCCAGTAG-TGCCAGCACCATGG-TTGA-  480
      |||| ||| ||||||||||   ||||||| |||||||||||||| |||| 
seq2  TCTTCCTACCATGTTAACCCGCCCAGTAGTTGCCAGCACCATGGTTTGAT  499

seq1  TTTGCACTTCCTTG-GTGCAC-TTCCTTGGTGC-TTAGGGATAAC-AAAC  526
      |||||||||||||| |||||| ||||||||||| ||||| ||||| ||||
seq2  TTTGCACTTCCTTGTGTGCACTTTCCTTGGTGCTTTAGGAATAACAAAAC  549

seq1  CCTT-ATCATA  536
      |||| ||||||
seq2  CCTTAATCATA  560

seq1: chr14_6030375_6031293
seq2: B6Ng01-185E06.g_67_986 (reverse)

seq1  TTACAGGACCCTTTGCCCTGAAATCTATAATTTGCCTCAGACATAAAGAT  50
      ||||||||||| ||||||||||||||||||||| | |||||||||||| |
seq2  TTACAGGACCC-TTGCCCTGAAATCTATAATTTACATCAGACATAAAGGT  49

seq1  ATGGGGAACATTGTCAGG-TCATATCAGATGTGTTGCAGGGAAATCCTGA  99
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  ATGGGG-ACATTGTCAGGTTCATATCAGATGTGTTGCAGGGAAATCCTGA  98

seq1  AGTTCATAGTGCTTAGCACTATCAAGCACTAATTAATCCAAAGTGTCTGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATAGTGCTTAGCACTATCAAGCACTAATTAATCCAAAGTGTCTGA  148

seq1  GTCCTCACCACATGACATGACCAGGGGAGCATCCTTCTCTGTTGTTTTCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCACCACATGACATGACCAGGGGAGCATCCTTCTCTGTTGTTTTCA  198

seq1  TCAGAGACTCAAGTTACCTACAGTAATCTGGAAGGTGAAGTGCTTCAACT  249
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  TCAGAGACTCAAAGTACCTACAGTAATCTGGAAGGTGAAGTGCTTCAACT  248

seq1  CCCTTCCATG-AAAGGAATAACACACTGATATTCCAATAGTGCCCACTCC  298
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCATGAAAAGGAATAACACACTGATATTCCAATAGTGCCCACTCC  298

seq1  TGGCATTCTTTGCCACTCAAAATGAAATTAAATAGCTCCCAGAAAAGTAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTCTTTGCCACTCAAAATGAAATTAAATAGCTCCCAGAAAAGTAG  348

seq1  CTGCAGGTTTGTCAATTCCTGGCTCTGTCAAACTAATCATCAG-AAATTC  397
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGCAGGTTTGTCAATTCCTGGCTCTGTCAAACTAATCATCAGAAAATTC  398

seq1  TTGAATCTTTGTCTGACATTGACAAAGTCCAAGGCTTCAGCTTGTAAGAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCTTTGTCTGACATTGACAAAGTCCAAGGCTTCAGCTTGTAAGAC  448

seq1  CTACTCCTGGACGGCCCAGCTCAAGCCTACCTCTACCAGGAAGTTCCCCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCCTGGACGGCCCAGCTCAAGCCTACCTCTACCAGGAAGTTCCCCA  498

seq1  ACTCTGCCCAGGACTCACTGTGCATTCTCCATAACCATTTCCTTCTTCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCCCAGGACTCACTGTGCATTCTCCATAACCATTTCCTTCTTCCT  548

seq1  TTTTCATGAGAAAGGATTCCCTCTTCCTTCTCTGTTGGTCTGGTCTCTCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATGAGAAAGGATTCCCTCTTCCTTCTCTGTTGGTCTGGTCTCTCC  598

seq1  TTCATCGCCATTCTCTTTCTGACATAGCCTGAGCAGCCAGGAAAACATTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCGCCATTCTCTTTCTGACATAGCCTGAGCAGCCAGGAAAACATTC  648

seq1  CTGCTGGTGAACCCAGAGCAAACAGAAGGGATGAACCACAGGCAGTTGCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGTGAACCCAGAGCAAACAGAAGGGATGAACCACAGGCAGTTGCT  698

seq1  GTCACCACAACACAGGTGACAACGCAGAAGATTCTAGTTCTCTCCGAGAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCACAACACAGGTGACAACGCAGAAGATTCTAGTTCTCTCCGAGAT  748

seq1  ACAAGAGATTCTCCAAGGAAGGCATTACTGATGATGTCACTAGCAACTGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGATTCTCCAAGGAAGGCATTACTGATGATGTCACTAGCAACTGC  798

seq1  CATGACCTACCTGTTAACTAGTTCTCCCCAGCTTGATCCTTTTCTGGGGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCTACCTGTTAACTAGTTCTCCCCAGCTTGATCCTTTTCTGGGGT  848

seq1  GCCTCTCCTGGAGCCTCTCATGGATCCGTGGGATCCCCTTTGGCAACCTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCCTGGAGCCTCTCATGGATCCGTGGGATCCCCTTTGGCAACCTC  898

seq1  TCCTTCCAAAGCTGGAGAATTC  919
      ||||||||||||||||||||||
seq2  TCCTTCCAAAGCTGGAGAATTC  920