BAC Information

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BAC

Clone NameB6Ng01-185G14
Chromosome14 (Build37)
Map Location 33,061,914 - 33,231,747
singlet/doubletdoublet
Overlap geneParg, LOC665601, Ogdhl, 1700024G13Rik, Chat
Upstream genePhf7, Bap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd, Ankrd28, Galntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23
Downstream geneSlc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658, Lrrc18, EG622657, Arhgap22, Mapk8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185G14.bB6Ng01-185G14.g
ACCGA010531GA010532
length1,0861,073
definitionB6Ng01-185G14.b B6Ng01-185G14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,061,914 - 33,062,977)(33,230,702 - 33,231,747)
sequence
gaattcagacccttctacctagaagcccttgctgtatttcctttccattt
tataggggattctgtgagttgtcttgcctcttcctgtgctcttacataag
attgttcttctaatcatgaaaaatgccacccattttaccatttcctaaag
aagacttttacttgaaggctttctggatgtaaaggcagaatgtatgactg
ggggcagagaatcttcattatttatagccactgaatcttcacatgctttt
aaatgcctttggaaagctaggtcttatgccaaaagtgtgcttttgtgtga
aatcttctaatgaactacttactcaggtcatatgcttctaaagccgtgca
tttctttccctcagataaattgaattacatgttaacaataacaatgccat
gccattacaaagaaaacagaattaagccgtgcagatcgggcttgctggac
actgcagcatagagagtgcttgggctttgttgccaaggaaaggatctgta
ttaactcagaatgctacagcgagacagcacaggctcgctgactcaaacaa
caaggtttagtttttcacggtttgggacctagacatcccacatcgaggtg
ctggtggttcagtttgaggtgagggtttctttatgtcttgtagaccgtgc
ctttctccctgtctcacttgctgtctctaggacccgagactgtaggattt
ggactcttctcatcgaactcagccttttccacttcatacaggccttgttt
ccaaataaagcctttgtttgggaattttatttcagcacaggaatattggg
aagtcagaaacatccagtccagaacagaatcagttttaattaccagagac
tactcctttctgttcccagtgtctcgtctgagctgtggcttcgactctca
ttacttactttattgcaaaactgaggatgacatatttttctgagatgctt
atcttgtttagttacattaactgccttagtaatatttatgcattattaaa
ttagtattttgccataaagacatttacctggtgatcctagtttgaccccg
gggacaagacaagtgcttggtgcccctgggaggagt
gaattcactatgtggccctgctctttaatatgtgattctcttacctcggt
ctctcaagtggctgggattgatgaaaggcaggttccactgggcagggtct
tttcatcataggtaacacaccctccctgccttccccaggttccactacag
gacagtaagtggtacttgaaacctgttgacataccataacgatagtaata
gctcacaatgtatatggtactttacaatatttatagggaccatcaggttg
ggggtggggcagcctgatgaatattggtggcttgttccctggcacactgg
aagggactcagaatttattatcacctggggctgattttccctcctgtttt
ctatatgttcatttatgctgcctgtagactgaaggtctttgctgaaaatt
aatagtgaaatcaaaattgtatgaggactatttctctagtttgagggaat
aatttattttttaattttgcaaagctattatttgcatgcaaacaagaggg
agcttgaggtagtgatcaatgtgttaattacagatcactcaaaaacaagc
agaaggatgacaaaaatcgatgagaaggattgagcagattattttgtata
tacttgagagcaattccaacatatttctgggctttagaattcgtcagtgt
agactttcctctaactcagtccctgattcatctcaatagctatgttttgc
tctgtttaaacactgtatttaaccaggcatgatagctcaggcccgtactc
caagtactcaggagcacatggcaggaggatcacaagttcaaggtgagtgt
ggggatctgagtgagactttcatctcaaaaagctcttagtcagcttttgc
taccacgctagcaaacaaggggaagatgaattcaaagcgatcagcacagg
gaagtggaattaacagagacaattaaccaattcagcacagagaaggaatt
aatggtagtacaaccagcccaatctgcactagagaaaggaattaattgga
gtacaattcagctctatcagcacagaagaagggaattaattaggttacaa
tctagcccaatcagctacagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_33061914_33062977
seq2: B6Ng01-185G14.b_42_1127

seq1  GAATTCAGACCCTTCTACCTAGAAGCCCTTGCTGTATTTCCTTTCCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACCCTTCTACCTAGAAGCCCTTGCTGTATTTCCTTTCCATTT  50

seq1  TATAGGGGATTCTGTGAGTTGTCTTGCCTCTTCCTGTGCTCTTACATAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGGATTCTGTGAGTTGTCTTGCCTCTTCCTGTGCTCTTACATAAG  100

seq1  ATTGTTCTTCTAATCATGAAAAATGCCACCCATTTTACCATTTCCTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTTCTAATCATGAAAAATGCCACCCATTTTACCATTTCCTAAAG  150

seq1  AAGACTTTTACTTGAAGGCTTTCTGGATGTAAAGGCAGAATGTATGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTTTACTTGAAGGCTTTCTGGATGTAAAGGCAGAATGTATGACTG  200

seq1  GGGGCAGAGAATCTTCATTATTTATAGCCACTGAATCTTCACATGCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGAGAATCTTCATTATTTATAGCCACTGAATCTTCACATGCTTTT  250

seq1  AAATGCCTTTGGAAAGCTAGGTCTTATGCCAAAAGTGTGCTTTTGTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCTTTGGAAAGCTAGGTCTTATGCCAAAAGTGTGCTTTTGTGTGA  300

seq1  AATCTTCTAATGAACTACTTACTCAGGTCATATGCTTCTAAAGCCGTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCTAATGAACTACTTACTCAGGTCATATGCTTCTAAAGCCGTGCA  350

seq1  TTTCTTTCCCTCAGATAAATTGAATTACATGTTAACAATAACAATGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCCTCAGATAAATTGAATTACATGTTAACAATAACAATGCCAT  400

seq1  GCCATTACAAAGAAAACAGAATTAAGCCGTGCAGATCGGGCTTGCTGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTACAAAGAAAACAGAATTAAGCCGTGCAGATCGGGCTTGCTGGAC  450

seq1  ACTGCAGCATAGAGAGTGCTTGGGCTTTGTTGCCAAGGAAAGGATCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGCATAGAGAGTGCTTGGGCTTTGTTGCCAAGGAAAGGATCTGTA  500

seq1  TTAACTCAGAATGCTACAGCGAGACAGCACAGGCTCGCTGACTCAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCAGAATGCTACAGCGAGACAGCACAGGCTCGCTGACTCAAACAA  550

seq1  CAAGGTTTAGTTTTTCACGGTTTGGGACCTAGACATCCCACATCGAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTTAGTTTTTCACGGTTTGGGACCTAGACATCCCACATCGAGGTG  600

seq1  CTGGTGGTTCAGTTTGAGGTGAGGG-TTCTTTATGTCTTGTAGACCGTGC  649
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGGTGGTTCAGTTTGAGGTGAGGGTTTCTTTATGTCTTGTAGACCGTGC  650

seq1  C-TTCTCCCTGTCTCACTTGCTGTCTCTAGGACCCGAGACTGTAGGATTT  698
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCCTGTCTCACTTGCTGTCTCTAGGACCCGAGACTGTAGGATTT  700

seq1  GGACTCTTCTCATCGAACTCAGCCTTTTCCACTTCATACAGGCCTTGTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTTCTCATCGAACTCAGCCTTTTCCACTTCATACAGGCCTTGTTT  750

seq1  CCAAATAAAGCC-TTGTTGGGAATTTTTATTTCAGCACAGGAATATTGGG  797
      |||||||||||| ||||| || | ||||||||||||||||||||||||||
seq2  CCAAATAAAGCCTTTGTTTGGGAATTTTATTTCAGCACAGGAATATTGGG  800

seq1  AAGTCAGAAACATCCAGTCCAGAACAGAATCAG-TTTAATTACCAGAGAC  846
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAGTCAGAAACATCCAGTCCAGAACAGAATCAGTTTTAATTACCAGAGAC  850

seq1  TACTCC-TTCTGTTCCCAGTGTCTCGTCTGAGCTGTGGC-TCGACTCTCA  894
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  TACTCCTTTCTGTTCCCAGTGTCTCGTCTGAGCTGTGGCTTCGACTCTCA  900

seq1  -TACTTACTTTATTGCAAAAACTGAGGATGACATA-TTTTCTGAGATGC-  941
       ||||||||||||||| |||||||||||||||||| ||||||||||||| 
seq2  TTACTTACTTTATTGC-AAAACTGAGGATGACATATTTTTCTGAGATGCT  949

seq1  TATC-TGTTTAGTTACA-TAACTG-CTTAGTAATA-TTATGCATTAT--A  985
      |||| |||||||||||| |||||| |||||||||| |||||||||||  |
seq2  TATCTTGTTTAGTTACATTAACTGCCTTAGTAATATTTATGCATTATTAA  999

seq1  AATAGTA-TTTGCCATAAAGACATTAAC--TGTGATCCTAG-TTGACCCC  1031
      | ||||| ||||||||||||||||| ||   |||||||||| ||||||||
seq2  ATTAGTATTTTGCCATAAAGACATTTACCTGGTGATCCTAGTTTGACCCC  1049

seq1  GGGGACAAGAC-AGTGCT--GTGCCCCT-GGAGGAGT  1064
      ||||||||||| ||||||  |||||||| ||||||||
seq2  GGGGACAAGACAAGTGCTTGGTGCCCCTGGGAGGAGT  1086

seq1: chr14_33230702_33231747
seq2: B6Ng01-185G14.g_68_1140 (reverse)

seq1  ACTCTGT-GCTGATT-GGCT-GATTGT-ACCTA--TTATTCCCTTC-TCT  43
      ||||||| ||||||| |||| |||||| |||||  | ||||||||| |||
seq2  ACTCTGTAGCTGATTGGGCTAGATTGTAACCTAATTAATTCCCTTCTTCT  50

seq1  GTGCTGATTG-GCTG-ATTGT-CTCC-ATTATTTCC-TTCTCT-GTGCTG  87
      |||||||| | |||| ||||| |||| |||| |||| |||||| |||| |
seq2  GTGCTGATAGAGCTGAATTGTACTCCAATTAATTCCTTTCTCTAGTGCAG  100

seq1  ATT-GGCTGGTTGT-CT-CCATTATTTCCTTCTCTGTGCTG-ATTGGTTA  133
      ||| |||||||||| || |||||| |||||||||||||||| ||||||||
seq2  ATTGGGCTGGTTGTACTACCATTAATTCCTTCTCTGTGCTGAATTGGTTA  150

seq1  ATTGTCTCTGTTA--TTCACTTCCCTGTGCTGATCGCTT--GATTCATCT  179
      |||||||||||||  | ||||||||||||||||||||||   ||||||||
seq2  ATTGTCTCTGTTAATTCCACTTCCCTGTGCTGATCGCTTTGAATTCATCT  200

seq1  T-CCCTTGTTTGCTAGCGTGGTAGC-AAAGCTGACTAAGAGCTTTTTGAG  227
      | ||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCCCCTTGTTTGCTAGCGTGGTAGCAAAAGCTGACTAAGAGCTTTTTGAG  250

seq1  ATG-AAGTCTCACTCAGAT-CCCACACTCACCTTGAACTTGTGATCCTCC  275
      ||| ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATGAAAGTCTCACTCAGATCCCCACACTCACCTTGAACTTGTGATCCTCC  300

seq1  TGCCATGTGCTCCTGAGTACTTGGAGTACGGGCCTGAGCTATCATGCCTG  325
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGTGCTCCTGAGTACTTGGAGTACGGGCCTGAGCTATCATGCCTG  350

seq1  GTT-AATACAGTGTTTAAACAGAGC-AAACATAGCTATTGAGATGAATCA  373
      ||| ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTTAAATACAGTGTTTAAACAGAGCAAAACATAGCTATTGAGATGAATCA  400

seq1  GGGACTGAGTTAGAGGAAAGTCTACACTGACGAATTCTAAAGCCCAGAAA  423
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGAGTTAGAGGAAAGTCTACACTGACGAATTCTAAAGCCCAGAAA  450

seq1  TATGTTGGAATTGCTCTCAAGTATATACAAAATAATCTGCTCAATCCTTC  473
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGGAATTGCTCTCAAGTATATACAAAATAATCTGCTCAATCCTTC  500

seq1  TCATCGATTTTTGTCATCCTTCTGCTTGTTTTTGAGTGATCTGTAATTAA  523
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGATTTTTGTCATCCTTCTGCTTGTTTTTGAGTGATCTGTAATTAA  550

seq1  CACATTGATCACTACCTCAAGCTCCCTCTTGTTTGCATGCAAATAATAGC  573
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGATCACTACCTCAAGCTCCCTCTTGTTTGCATGCAAATAATAGC  600

seq1  TTTGCAAAATTAAAAAATAAATTATTCCCTCAAACTAGAGAAATAGTCCT  623
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAAATTAAAAAATAAATTATTCCCTCAAACTAGAGAAATAGTCCT  650

seq1  CATACAATTTTGATTTCACTATTAATTTTCAGCAAAGACCTTCAGTCTAC  673
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAATTTTGATTTCACTATTAATTTTCAGCAAAGACCTTCAGTCTAC  700

seq1  AGGCAGCATAAATGAACATATAGAAAACAGGAGGGAAAATCAGCCCCAGG  723
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCATAAATGAACATATAGAAAACAGGAGGGAAAATCAGCCCCAGG  750

seq1  TGATAATAAATTCTGAGTCCCTTCCAGTGTGCCAGGGAACAAGCCACCAA  773
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATAAATTCTGAGTCCCTTCCAGTGTGCCAGGGAACAAGCCACCAA  800

seq1  TATTCATCAGGCTGCCCCACCCCCAACCTGATGGTCCCTATAAATATTGT  823
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATCAGGCTGCCCCACCCCCAACCTGATGGTCCCTATAAATATTGT  850

seq1  AAAGTACCATATACATTGTGAGCTATTACTATCGTTATGGTATGTCAACA  873
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACCATATACATTGTGAGCTATTACTATCGTTATGGTATGTCAACA  900

seq1  GGTTTCAAGTACCACTTACTGTCCTGTAGTGGAACCTGGGGAAGGCAGGG  923
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCAAGTACCACTTACTGTCCTGTAGTGGAACCTGGGGAAGGCAGGG  950

seq1  AGGGTGTGTTACCTATGATGAAAAGACCCTGCCCAGTGGAACCTGCCTTT  973
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTGTTACCTATGATGAAAAGACCCTGCCCAGTGGAACCTGCCTTT  1000

seq1  CATCAATCCCAGCCACTTGAGAGACCGAGGTAAGAGAATCACATATTAAA  1023
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATCCCAGCCACTTGAGAGACCGAGGTAAGAGAATCACATATTAAA  1050

seq1  GAGCAGGGCCACATAGTGAATTC  1046
      |||||||||||||||||||||||
seq2  GAGCAGGGCCACATAGTGAATTC  1073