BAC Information

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BAC

Clone NameB6Ng01-185M20
Chromosome14 (Build37)
Map Location 120,134,101 - 120,135,240
singlet/doubletsinglet
Overlap geneHs6st3
Upstream geneCldn10, Dzip1, Dnajc3a, LOC100043828, Ugcgl2, LOC619601, EG621324
Downstream geneLOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831, Mbnl2, Rap2a, LOC668835
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185M20.bB6Ng01-185M20.g
ACCGA010813GA010814
length1,160812
definitionB6Ng01-185M20.b B6Ng01-185M20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcacttcaattctctgagtcctcaactcaagagcagcatggca
gatccagactcatggtactgcttcagcgtcagctcagtcatcatcgcttt
tgactctgcttctcaccaggttatagtttattaacctggaattatggtat
cacatcacatcaatcttctcacctagctgctaatatttgcatttggcaag
ggatttggagctgagtaacttgggaaagaaacctttatgctaaccagatt
agatgcacatgtgcgtggaaaaaagctgacttccatgtcagggctttact
tgaacagaggatgatcattctagggatgccaaacatagactaccacatga
tctgcttaatgttaatgagagacatggaaagcatcaacaggcaggataca
ttgatgtcgcatccaccctgaccagcaggaaagacacaacaccacattgt
ccttcttcaagcaggtttattcaggaacacttcccattgcaatgcaggaa
caggaatccgcgaacaaccccggggcacgccttaaataccctactgactc
ctcccaatcaccccagtcacataacggcagtccattggttcacaggaagt
gacaacacctcaggcgagctgacgaggcatggagtctgcgcagtgcaggt
ggctgggatgtggctaagtctgaggtaatgaggaagtcaggcgcaggtca
taagacctggcagccgtcccgcgtgccatcttggggcggcggccatacct
gctcctcacacattgacttctttctgctttggacagggtgtagaatacag
aactgcctaagatattgagtgttactttgggaaatgtttcttttgaacca
ttttgtggaaagggctgggtgtcaacattctaaagctactctttgtgaca
gaaaggtagcctttgcaataagtaatttccaacaccagggaacatgatgg
gagcagtttccagttgagattagggttaagaattgaagtcttgggaagtt
actgcatcttctttttgtgatcgccactttagacccacactaaacattcg
tgagccatttttatgctgaaccagagagcaagttgctcaagccagctaag
tggtgagcattgagcacacaaccttatttcagtccgtttcacttttaagt
aggatgcact
gaattctcacctgaggaatactgaatggctaagaagcacctgaaaagatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
ttcacctcacaccagtcagaatggctaagataaaaaattcaggtgatagc
agatgctggccaggatgtatagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccgcaataccactcctgggc
atatacccagaagatgttccaactggtaataaggacacatgctccactat
gttcctagcagccttatttataatagccagaagctggaaagcacccagat
gcccctcaacagaaaaatggatacagaaaatgtgatacatttacacaatg
gagtattactcagctattaaaaagaatgaatttatgaaacatttgggcaa
atggatgtatctggagagcatcatcctgagtgtggtaacccaatcacaaa
agaactcatacaatatgtactcactgataagtgaatattagcccagaaac
ttaaaatacccaagatataagatacaattttgcttaaacacatgaaactc
tagaagaatgaagaacaaagtgtggacagtttgccccttcttagaattgg
gaataaaacacccatggaaggagttacatagacataagtttggagctgag
agaaaatgattgacaatctagataactgtcattttcccataatcagcttc
ccaatcactgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_120134101_120135240
seq2: B6Ng01-185M20.b_46_1205 (reverse)

seq1  AGTGCATCCTAATTAAAAGTGAA---GAATGAAAATAAAGTTGTGTGCTC  47
      ||||||||||| |||||||||||   || || |||||| |||||||||||
seq2  AGTGCATCCTACTTAAAAGTGAAACGGACTG-AAATAAGGTTGTGTGCTC  49

seq1  ATTGCTCA-CACTTAGCCTGCCTGAGC-ACTTGCTCTCT-GTTCAGCATA  94
      | |||||| ||||||||  || ||||| ||||||||||| ||||||||||
seq2  AATGCTCACCACTTAGCTGGCTTGAGCAACTTGCTCTCTGGTTCAGCATA  99

seq1  AAA--TGCTCACGAATGTTT-GTGTGGGTCTAAAGTGGCGATCAC-AAAA  140
      |||   |||||||||||||| |||||||||||||||||||||||| ||||
seq2  AAAATGGCTCACGAATGTTTAGTGTGGGTCTAAAGTGGCGATCACAAAAA  149

seq1  GAAGATGCAGTAACTTCCC-AGACTTCAA-TCTT-ACCCT-ATCTCAACT  186
      ||||||||||||||||||| ||||||||| |||| ||||| |||||||||
seq2  GAAGATGCAGTAACTTCCCAAGACTTCAATTCTTAACCCTAATCTCAACT  199

seq1  GGAAACTGCT-CCATCATGTT-CCTGGTGTTGG-AATTACTTATTGC-AA  232
      |||||||||| |||||||||| ||||||||||| ||||||||||||| ||
seq2  GGAAACTGCTCCCATCATGTTCCCTGGTGTTGGAAATTACTTATTGCAAA  249

seq1  GGCTACC-TTCTGTCACAAAGAGTAGCTTTAGAATGTTGACA-CCAGCCC  280
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  GGCTACCTTTCTGTCACAAAGAGTAGCTTTAGAATGTTGACACCCAGCCC  299

seq1  TTTCCACAAAATGGTTCAAAAGAAACATTTCCC-AAGTAACACTCAATAT  329
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTCCACAAAATGGTTCAAAAGAAACATTTCCCAAAGTAACACTCAATAT  349

seq1  CTTAGGCAGTTCTGTATTCTACACCCTGTCCAAAGCAGAAAGAAGTCAAT  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCAGTTCTGTATTCTACACCCTGTCCAAAGCAGAAAGAAGTCAAT  399

seq1  GTGTGAGGAGCAGGTATGGCCGCCGCCCCAAGATGGCACGCGGGACGGCT  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGGAGCAGGTATGGCCGCCGCCCCAAGATGGCACGCGGGACGGCT  449

seq1  GCCAGGTCTTATGACCTGCGCCTGACTTCCTCATTACCTCAGACTTAGCC  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGTCTTATGACCTGCGCCTGACTTCCTCATTACCTCAGACTTAGCC  499

seq1  ACATCCCAGCCACCTGCACTGCGCAGACTCCATGCCTCGTCAGCTCGCCT  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCAGCCACCTGCACTGCGCAGACTCCATGCCTCGTCAGCTCGCCT  549

seq1  GAGGTGTTGTCACTTCCTGTGAACCAATGGACTGCCGTTATGTGACTGGG  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTTGTCACTTCCTGTGAACCAATGGACTGCCGTTATGTGACTGGG  599

seq1  GTGATTGGGAGGAGTCAGTAGGGTATTTAAGGCGTGCCCCGGGGTTGTTC  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGGGAGGAGTCAGTAGGGTATTTAAGGCGTGCCCCGGGGTTGTTC  649

seq1  GCGGATTCCTGTTCCTGCATTGCAATGGGAAGTGTTCCTGAATAAACCTG  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGATTCCTGTTCCTGCATTGCAATGGGAAGTGTTCCTGAATAAACCTG  699

seq1  CTTGAAGAAGGACAATGTGGTGTTGTGTCTTTCCTGCTGGTCAGGGTGGA  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGAAGGACAATGTGGTGTTGTGTCTTTCCTGCTGGTCAGGGTGGA  749

seq1  TGCGACATCAATGTATCCTGCCTGTTGATGCTTTCCATGTCTCTCATTAA  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGACATCAATGTATCCTGCCTGTTGATGCTTTCCATGTCTCTCATTAA  799

seq1  CATTAAGCAGATCATGTGGTAGTCTATGTTTGGCATCCCTAGAATGATCA  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGCAGATCATGTGGTAGTCTATGTTTGGCATCCCTAGAATGATCA  849

seq1  TCCTCTGTTCAAGTAAAGCCCTGACATGGAAGTCAGCTTTTTTCCACGCA  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTTCAAGTAAAGCCCTGACATGGAAGTCAGCTTTTTTCCACGCA  899

seq1  CATGTGCATCTAATCTGGTTAGCATAAAGGTTTCTTTCCCAAGTTACTCA  929
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCATCTAATCTGGTTAGCATAAAGGTTTCTTTCCCAAGTTACTCA  949

seq1  GCTCCAAATCCCTTGCCAAATGCAAATATTAGCAGCTAGGTGAGAAGATT  979
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAAATCCCTTGCCAAATGCAAATATTAGCAGCTAGGTGAGAAGATT  999

seq1  GATGTGATGTGATACCATAATTCCAGGTTAATAAACTATAACCTGGTGAG  1029
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGATGTGATACCATAATTCCAGGTTAATAAACTATAACCTGGTGAG  1049

seq1  AAGCAGAGTCAAAAGCGATGATGACTGAGCTGACGCTGAAGCAGTACCAT  1079
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGTCAAAAGCGATGATGACTGAGCTGACGCTGAAGCAGTACCAT  1099

seq1  GAGTCTGGATCTGCCATGCTGCTCTTGAGTTGAGGACTCAGAGAATTGAA  1129
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGGATCTGCCATGCTGCTCTTGAGTTGAGGACTCAGAGAATTGAA  1149

seq1  GTGAAGAATTC  1140
      |||||||||||
seq2  GTGAAGAATTC  1160