BAC Information

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BAC

Clone NameB6Ng01-186A11
Chromosome14 (Build37)
Map Location 3,516,758 - 3,517,893
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040452, LOC100040657, LOC100040671, LOC100040682, LOC100040697, LOC544990, D830030K20Rik, LOC236565, LOC100040740, LOC100040755, LOC100040767, LOC100040779, LOC100038846
Downstream geneEG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186A11.bB6Ng01-186A11.g
ACCGA010982GA010983
length1,1351,192
definitionB6Ng01-186A11.b B6Ng01-186A11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattcacactgctgtgcacaaacccacacacagacacagacacccaag
tgaaaaaagtcaaaaaatgtaacaacatgcttgaaaaacagcagttcact
tctggtctgggatagctcagttggcctagaggaatgaagggctgggtttg
agtgagccccagtgttcatctgtgatcccagtgctgaggtaaaggcagca
tggtcagaatgatggagatctgtgagttatcatctggctgctaactaaaa
gcaagggaggaacttgtagactgctcactcaccccacttaaccctcattc
aaagtaaatgaaggacaggctacttaggcagcaggtaagaggccactgaa
caaagcatagtcacaaacaaagaggacccaacattccaaggcccctttaa
aggagagattcaggaatgcaaatctagtcagtcaagtcacagaaagtgag
ggctggaaaccatccagtggcttagctctctccacaatccttagtgacct
ttatatgtgtagctccagtggaatattagccttggaagttagtatgactt
gggagcatgctggatcaagtacgtgttttgaattttcggtttcaaaacgt
gtgaatgcatctgtctaccagactaagggccaggagatgcaggagtctga
agtccatgagagaggaaatgatccatgcaaatgcagtcactcctctgttt
gcaactagatggaaactgtctccacagctagtaaagatgatttcagaaaa
gatgattgaaaaacttgctagttgcaattttcattttctttttcccagag
agcagcaggagagacagttgacatttgagctgtctctgaactgcccctgt
ccctaatttgagttgagagctcacagggaaccacagacctgctccttagc
tggttttcttttcacaaatctttcagccatagaaaatgaacaaaagcagg
ctccccagccagcccagccagacatcccagctgccagaataggtgcttgg
gagcagctcagggcgcaaagcacaaccttgctctgttgagccaggtactg
tcctgggcatttggcttcaggctcagctcaggaggcaaccacctgggagc
tacaggcacccgaggcaagggaatgcctgagggaa
gaattctcacctgacaaataccaaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcaggaaaatgcaaatcaaacaaccctgagatt
ccacctcacaccagtcagaatggctaacatcaaaaattcaggtgacagca
gatgctggctggaatgtggagaaagaggaacactcctccattgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggcggttccttag
aaaattggacatactactactggaggatcccgcaatacctctcctgggca
tatatccagaagatggtccaactggtaagaaggacacatgctccactctg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
cagatggatctggaggacatcatactgagtgaggtaacccaatcacaaaa
gaattcacacaaggagaggtttgtgtcacaggcgccggcgggagccttct
tggctccgggactccgtggagggcaggctgcacgggagaccgtgtggaat
acagaggccagccgtttctgggacgggcgaaagtcgcagagcttctgggg
cggtgccatcttcgtatccagacaaccggccaccttcctggcgagagcca
cagagcttctgaggcggcaacatcttcgactccagacaaccggccacctt
cctggccaaagcagcacagcttctgggaaagatcctgttttgggccttca
ccctcagccaggaggaggtccaaacaccagataactgtacacctttcccc
gaaagaggagagcttgcctgcagagactgctctgaccactgaaactcaga
ggagagagcttgtctcccacgcctgctgattgagggtaacaaaatcaaca
gaggacatcttcttacaaagacacttattaacactaactccagagattgc
cagatgggcgaaaggttaacgtagaatctactaactagaaaccagaccac
tcacaatcatcagaacttagaacgctcactcgcctcaggttcagaacacc
cttaacacaaccctggaaaagtagaactcctcgtgattttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_3516758_3517893
seq2: B6Ng01-186A11.b_43_1176

seq1  GAATTCACACTGCTGTGCACAAACCCACACACAGACACAGACACCCAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACTGCTGTGCACAAACCCACACACAGACACAGACACCCAAGT  50

seq1  GAAAAAAGTCAAAAAATGTAACAACATGCTTGAAAAACAGCAGTTCACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGTCAAAAAATGTAACAACATGCTTGAAAAACAGCAGTTCACTT  100

seq1  CTGGTCTGGGATAGCTCAGTTGGCCTAGAGGAATGAAGGGCTGGGTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTGGGATAGCTCAGTTGGCCTAGAGGAATGAAGGGCTGGGTTTGA  150

seq1  GTGAGCCCCAGTGTTCATCTGTGATCCCAGTGCTGAGGTAAAGGCAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCCCAGTGTTCATCTGTGATCCCAGTGCTGAGGTAAAGGCAGCAT  200

seq1  GGTCAGAATGATGGAGATCTGTGAGTTATCATCTGGCTGCTAACTAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGAATGATGGAGATCTGTGAGTTATCATCTGGCTGCTAACTAAAAG  250

seq1  CAAGGGAGGAACTTGTAGACTGCTCACTCACCCCACTTAACCCTCATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAGGAACTTGTAGACTGCTCACTCACCCCACTTAACCCTCATTCA  300

seq1  AAGTAAATGAAGGACAGGCTACTTAGGCAGCAGGTAAGAGGCCACTGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATGAAGGACAGGCTACTTAGGCAGCAGGTAAGAGGCCACTGAAC  350

seq1  AAAGCATAGTCACAAACAAAGAGGACCCAACATTCCAAGGCCCCTTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATAGTCACAAACAAAGAGGACCCAACATTCCAAGGCCCCTTTAAA  400

seq1  GGAGAGATTCAGGAATGCAAATCTAGTCAGTCAAGTCACAGAAAGTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATTCAGGAATGCAAATCTAGTCAGTCAAGTCACAGAAAGTGAGG  450

seq1  GCTGGAAACCATCCAGTGGCTTAGCTCTCTCCACAATCCTTAGTGACCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAACCATCCAGTGGCTTAGCTCTCTCCACAATCCTTAGTGACCTT  500

seq1  TATATGTGTAGCTCCAGTGGAATATTAGCCTTGGAAGTTAGTATGACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGTAGCTCCAGTGGAATATTAGCCTTGGAAGTTAGTATGACTTG  550

seq1  GGAGCATGCTGGATCAAGTACGTGTTTTGAATTTTCGGTTTCAAAACGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATGCTGGATCAAGTACGTGTTTTGAATTTTCGGTTTCAAAACGTG  600

seq1  TGAATGCATCTGTCTACCAGACTAAGGGCCAGGAGATGCAGGAGTCTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCATCTGTCTACCAGACTAAGGGCCAGGAGATGCAGGAGTCTGAA  650

seq1  GTCCATGAGAGAGGAAATGATCCATGCAAATGCAGTCACTCCTCTGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGAGAGAGGAAATGATCCATGCAAATGCAGTCACTCCTCTGTTTG  700

seq1  CAACTAGATGGAAACTGTCTCCACAGCTAGTAAAGATGATTTCAGAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGATGGAAACTGTCTCCACAGCTAGTAAAGATGATTTCAGAAAAG  750

seq1  ATGATTGAAAAACTTGCTAGTTGCAATTTTCATTTTCTTTTTCCCAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGAAAAACTTGCTAGTTGCAATTTTCATTTTCTTTTTCCCAGAGA  800

seq1  GCAGCAGGAGAGACAGTTGACATTTGAGCTGTCTCTGAACTGCCCCTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGGAGAGACAGTTGACATTTGAGCTGTCTCTGAACTGCCCCTGTC  850

seq1  CCTAATTTGAGTTGAGAGCTCACAGGGAACCACAGACCTGCTCCTTAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTTGAGTTGAGAGCTCACAGGGAACCACAGACCTGCTCCTTAGCT  900

seq1  GGTTTTCTTTTCACAAAATCTTTCAGCCATAGAAAATGAACAAAAGCAGG  950
      |||||||||||||| ||||||||||||||||||||||||||||||||| |
seq2  GGTTTTCTTTTCAC-AAATCTTTCAGCCATAGAAAATGAACAAAAGCA-G  948

seq1  GCTCCCCAGCCAGCCCAGCCAGACATCCCAGCTGCCAGAATAGGTGCTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCAGCCAGCCCAGCCAGACATCCCAGCTGCCAGAATAGGTGCTTG  998

seq1  GGAGCAGCTCAGGGGCGCAAAGCACAACCTTGCTCTGTTGAAGCCAGGTA  1050
      ||||||||||| |||||||||||||||||||||||||||| |||||||||
seq2  GGAGCAGCTCA-GGGCGCAAAGCACAACCTTGCTCTGTTG-AGCCAGGTA  1046

seq1  CTGTCCTGGGCAATTGGCTCCAGGCTCAGCTCAGGAGGCAACCACCT-GG  1099
      |||||||||||| |||||| ||||||||||||||||||||||||||| ||
seq2  CTGTCCTGGGCATTTGGCTTCAGGCTCAGCTCAGGAGGCAACCACCTGGG  1096

seq1  AGCTACAGGCACCCGAGGCAA-GGAATGCCTGAAGGAA  1136
      ||||||||||||||||||||| ||||||||||| ||||
seq2  AGCTACAGGCACCCGAGGCAAGGGAATGCCTGAGGGAA  1134