BAC Information

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BAC

Clone NameB6Ng01-186J13
Chromosome14 (Build37)1 (Build37)
Map Location 83,135,047 - 83,135,16415,131,905 - 15,132,785
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186J13.bB6Ng01-186J13.g
ACCGA011393GA011394
length1,006881
definitionB6Ng01-186J13.b B6Ng01-186J13.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(83,135,047 - 83,135,164)(15,131,905 - 15,132,785)
sequence
gaattctctgtttagctctgtaccccatttttaatagggttatttggttc
tctggagtctaacctcttgagttctttgtatatattggatattagccatc
tattggattgtagagttggtaaagatcttttcccaatctgttggtggccc
ttttgtcttattgtcagtattttttgccttacagaagctttgcaatttta
tgatgtcccatttgtcgattcttgatctcagagcataagccattggtgtt
ctgtgtaggaactcttcccctgtgcccatgtgctccaggctgttccccaa
tttctcttctattagattcagtgtatctgattgatccacttagacttgag
ctttgtagaagaatataagaatggattgattggttacttcatattgttgt
tccatatatagggttgcagatccctttagctccttgggtactttctctag
ctcctccattgggggccctgtgatccatccaatagctgactgtgagcatc
cacttctgtgtttgctaggccccggcatagtctcacaagtgacagctatt
ttagggtccttccagcaaattcttgcttgtgtatgcaatggtgtcagcgt
ttggaggctaattatgggatggatccccagatgtggcagtctctagatgg
tccatccttctgtctcagctccaaattttgtctctgtaactccttccatg
ggtgttttgttcccaattctaagaaggggcaaagtgtccacacgttggtc
ttcgttcttcttgagtttcatgcgtttagcaaattgtatcttatatcttg
ggtatcctaagttcctgggctaatatccacttatcagtgagtacatatca
tgtgagttcttttgtgattgggttacctcactcaggatgatgccctccag
gtccatccatttgcctaggaatttcataaattcattctttttaatagctg
agtagtctccattgtgtaaatgtactacattttcttgtatcattcctctg
ttgagg

gaattcatctctcttacccagtctcaccctgcccagatccaagatctctg
gcatgtctggctatctcaagtccctctaaagcaggccttactgtatgtgg
aaagtgattgcatgcttcatttacctagcatggctttggtttgtttgcaa
aatttaacctagttatttttaatttttagcacctttgctgctaagatggc
agtcaactaatctgtcaatttgttgttactattgttaataacagatgtgt
cacatagatttttttaagggtccataattctagattaaccatttcctccc
ctaaattagtacgagcttagtaaatggagacttctgaagataatgtgtcc
tctctaggattcattttctctcactagactctggggataagtcttatgta
gcataggttggcctcaaactcactatgtgactgatagtgatttggggctc
tttatttttctacctccacctccaaagttttagagttacaggtatgtgcc
tctatacttgctgtttcttatgattcttaaatgaggattatgtctaaaga
aagtatgtagaaatctgaggcaaaatttttggctaccacaatgaaaggag
gtctactactggtctttactggcctgaaagtttctttattttatgaagca
aaattgaaattcattaacaaaagttgtactaggaatacaactaaattggt
agaatgtttgtgtagcatgcaaaataacatgagtctgatctctattacca
tataaactgggcacagtggcacatgtctgctatcccagcactctggatat
agagagatgagcatcagaagttcaaggacattctcagatgcatagggagt
gtaaagccaacaaggaggagggggaggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83135047_83135164
seq2: B6Ng01-186J13.b_453_574 (reverse)

seq1  GAGACTATGCCGGGGCCTAG----CACAGAAGTGGATGCTCACAGTCAGC  46
      ||||||||||||||||||||    ||||||||||||||||||||||||||
seq2  GAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGC  50

seq1  TATTGGATGGATCACAGGGTCCCCAACGGAGGAGCTAGAGAAAGTACCCA  96
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  TATTGGATGGATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCA  100

seq1  AGGAGCTAAAGGGATCTGCAAC  118
      ||||||||||||||||||||||
seq2  AGGAGCTAAAGGGATCTGCAAC  122


seq1: chr1_15131905_15132785
seq2: B6Ng01-186J13.g_63_943 (reverse)

seq1  TCTTCCTCCCCCTCCTCCTTGTTGGCTTTACACTCCCTATGCATCTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCCCCCTCCTCCTTGTTGGCTTTACACTCCCTATGCATCTGAGA  50

seq1  ATGTCCTTGAACTTCTGATGCTCATCTCTCTATATCCAGAGTGCTGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTTGAACTTCTGATGCTCATCTCTCTATATCCAGAGTGCTGGGAT  100

seq1  AGCAGACATGTGCCACTGTGCCCAGTTTATATGGTAATAGAGATCAGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACATGTGCCACTGTGCCCAGTTTATATGGTAATAGAGATCAGACT  150

seq1  CATGTTATTTTGCATGCTACACAAACATTCTACCAATTTAGTTGTATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTATTTTGCATGCTACACAAACATTCTACCAATTTAGTTGTATTCC  200

seq1  TAGTACAACTTTTGTTAATGAATTTCAATTTTGCTTCATAAAATAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACAACTTTTGTTAATGAATTTCAATTTTGCTTCATAAAATAAAGAA  250

seq1  ACTTTCAGGCCAGTAAAGACCAGTAGTAGACCTCCTTTCATTGTGGTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAGGCCAGTAAAGACCAGTAGTAGACCTCCTTTCATTGTGGTAGC  300

seq1  CAAAAATTTTGCCTCAGATTTCTACATACTTTCTTTAGACATAATCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATTTTGCCTCAGATTTCTACATACTTTCTTTAGACATAATCCTCA  350

seq1  TTTAAGAATCATAAGAAACAGCAAGTATAGAGGCACATACCTGTAACTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAATCATAAGAAACAGCAAGTATAGAGGCACATACCTGTAACTCT  400

seq1  AAAACTTTGGAGGTGGAGGTAGAAAAATAAAGAGCCCCAAATCACTATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTGGAGGTGGAGGTAGAAAAATAAAGAGCCCCAAATCACTATCA  450

seq1  GTCACATAGTGAGTTTGAGGCCAACCTATGCTACATAAGACTTATCCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATAGTGAGTTTGAGGCCAACCTATGCTACATAAGACTTATCCCCA  500

seq1  GAGTCTAGTGAGAGAAAATGAATCCTAGAGAGGACACATTATCTTCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTAGTGAGAGAAAATGAATCCTAGAGAGGACACATTATCTTCAGAA  550

seq1  GTCTCCATTTACTAAGCTCGTACTAATTTAGGGGAGGAAATGGTTAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCATTTACTAAGCTCGTACTAATTTAGGGGAGGAAATGGTTAATCT  600

seq1  AGAATTATGGACCCTTAAAAAAATCTATGTGACACATCTGTTATTAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATGGACCCTTAAAAAAATCTATGTGACACATCTGTTATTAACAA  650

seq1  TAGTAACAACAAATTGACAGATTAGTTGACTGCCATCTTAGCAGCAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAACAACAAATTGACAGATTAGTTGACTGCCATCTTAGCAGCAAAGG  700

seq1  TGCTAAAAATTAAAAATAACTAGGTTAAATTTTGCAAACAAACCAAAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAAAATTAAAAATAACTAGGTTAAATTTTGCAAACAAACCAAAGCC  750

seq1  ATGCTAGGTAAATGAAGCATGCAATCACTTTCCACATACAGTAAGGCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGGTAAATGAAGCATGCAATCACTTTCCACATACAGTAAGGCCTG  800

seq1  CTTTAGAGGGACTTGAGATAGCCAGACATGCCAGAGATCTTGGATCTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAGGGACTTGAGATAGCCAGACATGCCAGAGATCTTGGATCTGGG  850

seq1  CAGGGTGAGACTGGGTAAGAGAGATGAATTC  881
      |||||||||||||||||||||||||||||||
seq2  CAGGGTGAGACTGGGTAAGAGAGATGAATTC  881


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