BAC Information

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BAC

Clone NameB6Ng01-186M14
Chromosome14 (Build37)
Map Location 109,714,061 - 109,715,218
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668761, Slitrk1
Downstream geneLOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186M14.bB6Ng01-186M14.g
ACCGA011539GA011540
length1,1431,170
definitionB6Ng01-186M14.b B6Ng01-186M14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaacgtgttccttagctttttccctttgctgacagtagttacg
tgagaataaaaatgagaattatgttgtgtcacctacacttttaaggcaat
aactgtctacctcattctgtcttcagatgggtctttgaagcaaatggtaa
caatataggtttcaaaatccacttgcttgcaataattcaagcaacaagga
tgaaaaacctcaccttttacatttacaatattcctatttatgtagggata
tttattagaaagaactaattcttatgtttatatgttaaatataacttatt
tatcagtcaatgctatgtctagtaaactggggaattgcaaggatttaaaa
caagtatttcctcagtaatttggtgcaatattttaaaattaatcaaatca
ttacttttgagaactccattcatggctgctgaatttacatcattttcacc
catctttctctccatctcaacacattattaaatttatgacctcttcatct
ttactgatgattgttattttttccatgaaaactttcagaaaggtattagt
taaaggctggagagatgggttatcagctaatgtgcttagtgggcaaacaa
tagagcaaaaatttggaatcctagaacctacaaacatgcccaatatagtg
gcaacttattcataattccaaccttgagaggaaagaaaagtaaaaggctg
aatacagagactagtgtatcagtgatcactgaaattgctgagagacctgc
ttcaaaatggttaagggaaacagtgatcaagaaagtttcctgacattaac
taacttctttacatgccactatacaagcaaacacattcctccacaaacgc
atgtgtacacacatgtaaaaacattatatatatatataaacatattatat
tatataatattatatatattatatatttaatatatataataaaacaagtt
taatctatattatagaagataaattgtaatattgtcttaaacacacaatt
taaaatatacttaaaatattttgttgaaaaatttaaatatgtatttcaat
tcaatataaatgctaacaaaattccctttgaaagaaacgtagcttttaaa
attttggcattattaaatacatcaagtaactcaattagaaaca

gaattctcacccgaggaataccgaatggcagagaagcacctgaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccccgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgtggatgtggagaaagaggaacactcctccattgttggtgg
gattgaaggcttgtacaaccactctggaaatccgtctggcggttcctcag
aaaattggacatagtactaccagaggatccagcaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctccactatc
ttcatagcagccttatttataatagctagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaagaaaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagccccaaacct
aggattcccaagatataagatacaatttgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcacctccttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccactgcatacactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaacac
agaagtggatgctcacagtcagctaatggatggatcacagggcccccaat
ggaggagctagagaaagaccaagagctaaagggatctgcaaccctatagt
gaacacatatgactaacagtaccccagagctcgtgtctctagctgcatat
gtatcaaaggatgcttagtcgtcatcactggcaagagagtccatgaactt
gccaacctttatatgccagttacgaatgcagccaaaatgggactgttgtg
tcacggcaaatgcgcgcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_109714061_109715218
seq2: B6Ng01-186M14.b_46_1188

seq1  GAATTCTGAACGTGTTCCTTAGCTTTTTCCCTTTGCTGACAGTAGTTACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACGTGTTCCTTAGCTTTTTCCCTTTGCTGACAGTAGTTACG  50

seq1  TGAGAATAAAAATGAGAATTATGTTGTGTCACCTACACTTTTAAGGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATAAAAATGAGAATTATGTTGTGTCACCTACACTTTTAAGGCAAT  100

seq1  AACTGTCTACCTCATTCTGTCTTCAGATGGGTCTTTGAAGCAAATGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCTACCTCATTCTGTCTTCAGATGGGTCTTTGAAGCAAATGGTAA  150

seq1  CAATATAGGTTTCAAAATCCACTTGCTTGCAATAATTCAAGCAACAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAGGTTTCAAAATCCACTTGCTTGCAATAATTCAAGCAACAAGGA  200

seq1  TGAAAAACCTCACCTTTTACATTTACAATATTCCTATTTATGTAGGGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACCTCACCTTTTACATTTACAATATTCCTATTTATGTAGGGATA  250

seq1  TTTATTAGAAAGAACTAATTCTTATGTTTATATGTTAAATATAACTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGAAAGAACTAATTCTTATGTTTATATGTTAAATATAACTTATT  300

seq1  TATCAGTCAATGCTATGTCTAGTAAACTGGGGAATTGCAAGGATTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTCAATGCTATGTCTAGTAAACTGGGGAATTGCAAGGATTTAAAA  350

seq1  CAAGTATTTCCTCAGTAATTTGGTGCAATATTTTAAAATTAATCAAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATTTCCTCAGTAATTTGGTGCAATATTTTAAAATTAATCAAATCA  400

seq1  TTACTTTTGAGAACTCCATTCATGGCTGCTGAATTTACATCATTTTCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTGAGAACTCCATTCATGGCTGCTGAATTTACATCATTTTCACC  450

seq1  CATCTTTCTCTCCATCTCAACACATTATTAAATTTATGACCTCTTCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTCTCTCCATCTCAACACATTATTAAATTTATGACCTCTTCATCT  500

seq1  TTACTGATGATTGTTATTTTTTCCATGAAAACTTTCAGAAAGGTATTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGATGATTGTTATTTTTTCCATGAAAACTTTCAGAAAGGTATTAGT  550

seq1  TAAAGGCTGGAGAGATGGGTTATCAGCTAATGTGCTTAGTGGGCAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCTGGAGAGATGGGTTATCAGCTAATGTGCTTAGTGGGCAAACAA  600

seq1  TAGAGCAAAAATTTGGAATCCTAGAACCTACAAACATGCCCAATATAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCAAAAATTTGGAATCCTAGAACCTACAAACATGCCCAATATAGTG  650

seq1  GCAACTTATTCATAATTCCAACCTTGAGAGGAAAGAAAAGTAAAAGGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTATTCATAATTCCAACCTTGAGAGGAAAGAAAAGTAAAAGGCTG  700

seq1  AATACAGAGACTAGTGTATCAGTGATCACTGAAATTGCTGAGAGACCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGAGACTAGTGTATCAGTGATCACTGAAATTGCTGAGAGACCTGC  750

seq1  TTCAAAATGGTTAAGGGAAACAGTGATCAAGAAAGTTTCCTGACATTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATGGTTAAGGGAAACAGTGATCAAGAAAGTTTCCTGACATTAAC  800

seq1  TAACTTCTTTACATGCCACTATACAAGCAAACACATTCCTCCACAAACGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTTTACATGCCACTATACAAGCAAACACATTCCTCCACAAACGC  850

seq1  ATGTGTACACACATGTAAAAACATTATATATATATATAAACATATTATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTACACACATGTAAAAACATTATATATATATATAAACATATTATAT  900

seq1  TATATAATATTATATATATTATATATTTAATATATATAATAAAACAAG-T  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATATAATATTATATATATTATATATTTAATATATATAATAAAACAAGTT  950

seq1  TAATCTATATTATAGAAGAATAAATTGTAATATTGTCTTAAACACACAAA  999
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  TAATCTATATTATAGAAG-ATAAATTGTAATATTGTCTTAAACACACAA-  998

seq1  TTTTAAAATATACTTAAAAATTATTTTGTTGAAAAATTTTAAAATATGTA  1049
       ||||||||||||||||||  ||||||||||||||||||  |||||||||
seq2  -TTTAAAATATACTTAAAA--TATTTTGTTGAAAAATTT--AAATATGTA  1043

seq1  TTTCAATTCAATATAAATTGCTTAACAAAATTCCCCTTGAAAGAAACGTA  1099
      ||||||||||||||||| ||| ||||||||||||| ||||||||||||||
seq2  TTTCAATTCAATATAAA-TGC-TAACAAAATTCCCTTTGAAAGAAACGTA  1091

seq1  GCTTTTAAAAATTTTTGCCAATTATTAAAATTACATCAAATTAAAACTC-  1148
      ||||||||||  ||||| | |||||||||  |||||||| |   ||||| 
seq2  GCTTTTAAAA--TTTTGGC-ATTATTAAA--TACATCAAGT---AACTCA  1133

seq1  ATTAGAAACA  1158
      ||||||||||
seq2  ATTAGAAACA  1143


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