BAC Information

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BAC

Clone NameB6Ng01-186N18
Chromosome14 (Build37)
Map Location 14,104,854 - 14,105,926
singlet/doubletsinglet
Overlap geneEG328354
Upstream gene3830406C13Rik, EG667072, Fezf2, Cadps, EG432822, LOC100042022, LOC100042026
Downstream geneSynpr, A430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186N18.bB6Ng01-186N18.g
ACCGA011594GA011595
length1,1631,084
definitionB6Ng01-186N18.b B6Ng01-186N18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactactggaggacccaggattacctctcttgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatatccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctctggtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcacccta
taggtggatcacattatgaactaaccagtaccccggagctcttgactcta
gctgcatatgtatcaaaagatggctagtcggcatcactggaaagagaggt
ccattggacatgccaaactttatatggccccagaaacagggaacgcccca
ggggccaaaagtg
gaattctcctcacaaactccattgttggcctgttttccaacagaaataat
ttccaattattttttacttaaaagttgaagggcaaaaaactttgtgatct
caagagaaagcagagtatttcaagtatgggtttagactagggaaaggtaa
ctaagcagggtcttacaattaattgataagcaagataggtttgtttttca
taggtaccaaagctatttgtaatgttgaaaaataagctctaaagactcca
taatgtgatacaacagacacatatagcactgcttctattatgtttattaa
ctatgtgatagaatctagctactcgtttttatctttatcatccataagat
tttttttcacatgcattttcccctaaaacaaggataaaatggctgaaagc
aaaaactatgttttgtaaatatgtctacctaatttctacttatattcaac
agtgatttatttttagacatatatgtgtgtgtgtgcaagtgtatgtttgt
gtctgtacatggtgttgcacacattacagtgcatatgtagaggaaagggg
acaacttcagctgtcactcttcacctactatgctcatgtcagtctcatgt
tagctgttgagtgtctcaggctgtccctggagcatcacatcttcctgtag
gagtcctgaggtaacagatgcacacatgtgcccatctccctgtaggagga
ctaaggtaacagatgcacacatgtgcccatctccctgtaggagggctgag
gtaacagatgcacacatgtgcccatctccctgtaggagggctgaggtaac
agatgcacacatgtgcccatctccctgtaagagggctgaggtaacagatg
cacacatgtgcccatctccttgtaggagggctgaggtaacagatgcccac
atgttgcccaccttcctggtagaagactgaaggtaacagatgcacacatg
tgcccaatcttccctgtaggagggctgaggtaacagatgcacacttgtgc
ccatctcccttgtaggaggcttgaagttatcagatgcacaccattggccc
acttcccttgtaaggagggcttgaaggtaacaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14104854_14105926
seq2: B6Ng01-186N18.g_66_1149

seq1  GAATTCTCCTCACAAACTCCATTGTTGGCCTGTTTTCCAACAGAAATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCACAAACTCCATTGTTGGCCTGTTTTCCAACAGAAATAAT  50

seq1  TTCCAATTATTTTTTACTTAAAAGTTGAAGGGCAAAAAACTTTGTGATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTATTTTTTACTTAAAAGTTGAAGGGCAAAAAACTTTGTGATCT  100

seq1  CAAGAGAAAGCAGAGTATTTCAAGTATGGGTTTAGACTAGGGAAAGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAAAGCAGAGTATTTCAAGTATGGGTTTAGACTAGGGAAAGGTAA  150

seq1  CTAAGCAGGGTCTTACAATTAATTGATAAGCAAGATAGGTTTGTTTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAGGGTCTTACAATTAATTGATAAGCAAGATAGGTTTGTTTTTCA  200

seq1  TAGGTACCAAAGCTATTTGTAATGTTGAAAAATAAGCTCTAAAGACTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACCAAAGCTATTTGTAATGTTGAAAAATAAGCTCTAAAGACTCCA  250

seq1  TAATGTGATACAACAGACACATATAGCACTGCTTCTATTATGTTTATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGATACAACAGACACATATAGCACTGCTTCTATTATGTTTATTAA  300

seq1  CTATGTGATAGAATCTAGCTACTCGTTTTTATCTTTATCATCCATAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGATAGAATCTAGCTACTCGTTTTTATCTTTATCATCCATAAGAT  350

seq1  TTTTTTTCACATGCATTTTCCCCTAAAACAAGGATAAAATGGCTGAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCACATGCATTTTCCCCTAAAACAAGGATAAAATGGCTGAAAGC  400

seq1  AAAAACTATGTTTTGTAAATATGTCTACCTAATTTCTACTTATATTCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTATGTTTTGTAAATATGTCTACCTAATTTCTACTTATATTCAAC  450

seq1  AGTGATTTATTTTTAGACATATATGTGTGTGTGTGCAAGTGTATGTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTATTTTTAGACATATATGTGTGTGTGTGCAAGTGTATGTTTGT  500

seq1  GTCTGTACATGGTGTTGCACACATTACAGTGCATATGTAGAGGAAAGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTACATGGTGTTGCACACATTACAGTGCATATGTAGAGGAAAGGGG  550

seq1  ACAACTTCAGCTGTCACTCTTCACCTACTATGCTCATGTCAGTCTCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTCAGCTGTCACTCTTCACCTACTATGCTCATGTCAGTCTCATGT  600

seq1  TAGCTGTTGAGTGTCTCAGGCTGTCCCTGGAGCATCACATCTTCCTGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTTGAGTGTCTCAGGCTGTCCCTGGAGCATCACATCTTCCTGTAG  650

seq1  GAGTCCTGAGGTAACAGATGCACACATGTGCCCATCTCCCTGTAGGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTGAGGTAACAGATGCACACATGTGCCCATCTCCCTGTAGGAGGA  700

seq1  CTAAGGTAACAGATGCACACATGTGCCCATCTCCCTGTAGGAGGGCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTAACAGATGCACACATGTGCCCATCTCCCTGTAGGAGGGCTGAG  750

seq1  GTAACAGATGCACACATGTGCCCATCTCCCTGTAGGAGGGCTGAGGTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAGATGCACACATGTGCCCATCTCCCTGTAGGAGGGCTGAGGTAAC  800

seq1  AGATGCACACATGTGCCCATCTCCCTGTAGGAGGGCTGAGGTAACAGATG  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGATGCACACATGTGCCCATCTCCCTGTAAGAGGGCTGAGGTAACAGATG  850

seq1  CACACATGTGCCCATCTCCCTGTAGGAGGGCTGAGGTAACAGATGCACAC  900
      ||||||||||||||||||| |||||||||||||||||||||||||| |||
seq2  CACACATGTGCCCATCTCCTTGTAGGAGGGCTGAGGTAACAGATGCCCAC  900

seq1  ATG-TGCCCACCTCCCTGTAGGAGGACTG-AGGTAACAGATGCACACATG  948
      ||| ||||||||| ||||   || ||||| ||||||||||||||||||||
seq2  ATGTTGCCCACCTTCCTGGTAGAAGACTGAAGGTAACAGATGCACACATG  950

seq1  TGCCC-ATC-TCCCTGTAGGAGGGCTGAGGTAACAGATGCACACATGTGC  996
      ||||| ||| |||||||||||||||||||||||||||||||||| |||||
seq2  TGCCCAATCTTCCCTGTAGGAGGGCTGAGGTAACAGATGCACACTTGTGC  1000

seq1  CCATCTCCC-TGTAGGAGGGCTG-AGGTAACAGATGCACA-CATGTGCCC  1043
      ||||||||| |||||||||  || || || |||||||||| |||  ||||
seq2  CCATCTCCCTTGTAGGAGGCTTGAAGTTATCAGATGCACACCATTGGCCC  1050

seq1  ACCTCCC-TGT-AGGAGGGCT--GAGGTAACAGA  1073
      || |||| ||| |||||||||   ||||||||||
seq2  ACTTCCCTTGTAAGGAGGGCTTGAAGGTAACAGA  1084