BAC Information

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BAC

Clone NameB6Ng01-187I24
Chromosome14 (Build37)
Map Location 84,202,996 - 84,204,136
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043773, LOC100043279
Downstream geneLOC100043775, LOC100043776, LOC100043280, LOC100043285, Pcdh17, 9630013A20Rik, LOC629794
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187I24.bB6Ng01-187I24.g
ACCGA012109GA012110
length6511,141
definitionB6Ng01-187I24.b B6Ng01-187I24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttattatgaatgggttttggattttg
tcaaatgctttttctgcatctaacgagatgatcatttggtttttgtcttt
gagtttgtttatatactggattacgttgatggatttccatatattgaacc
atccatgcatccctgggatgaaacctacttggtcaggatggatgatagtt
ttgatgtgttcttggatttggttagagagatctttattgaggatttttgc
atcgatattcataagggaaattggtctaaagttctatatctttgttgggt
ctttttgtggtctaggtatcagagttattgtagcttcatagaatgagttg
ggtagagtaccttctacttatattttgtggaatagtttgtgaagaaccgg
gattagatcttctttgaaagtctgatagaactctgcactaaacccatctg
gtcctgggcttttgttggttgggtgactattaatgactgcttctattcct
ttaggggatataggactgttcagataattaaccttatcttgatttaactt
tggtacctggtatctgtctaaaaacttatccatttcatccaggttttcca
gttttgttgaatatagccttttgtagaaggatctgattgtggtttggatt
t

gaattcattcattccaggaaggatcatttacagtggttgcccaatgagca
gtggtcagccctgaaacactacacacaaataacaaaaactggctcagcag
ggttgtttacatatttgagcagatacacatatatgtaacaataataaaga
aaaagagtctaccaattagagaatgaggtaatggcaaggattggtggaag
gatacccagagaagtagagagaggttcctcaaggggctggattaggaaag
ggagaaggaaagtgaagtaaatctggttgaaataaaaaacaaatttttaa
atgaataaataaaggaaaaaaactttcttttggtaaatagctataatttc
atcagagacaatattaattaaattaaaataaacagatttttgtgttccat
ctttaaaataacttaagtcccacataatccctttctgtcttttaatatgt
ttactattatagttctatctagatttagttgacaaaatatcctgtgttca
attttatctatatccttaagtagtcaaggaaagaatcataagtgccagta
atcagtaatttgcattcagccatcagtgaaaaaactttcccccaatgtct
cagcaataggtggaaatgggttttcctcaggatggaacttgactatttca
ctatgccaattgttggagcctgaatgtgcgaagttacagccatgcaggga
gaggctgtttttagggtattaggagacacattgtcaagagcatcagcaga
agcagactgcactgcagctgttctcttgcattatataagagatccatatt
ttaactcttagctgtcataagcaattaacaagaaacggaaaaaaaaacac
ttcacattctcataaataacaggaacttcacacgcattgacatatgcaac
tacagagttcaatttttctttttcaaaatatccaaaacttcactccacct
cagggagttattttttttaagatgttacagtttactgtttttattttctt
gatatgttatcacagttatgaaatatactagattaattcactattttatc
tgggaaaatgcataatttgccatttatttggcattttaggtatggccttt
tgcttctatcattgaataaagacctgaaagcatgtatgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_84202996_84204136
seq2: B6Ng01-187I24.g_65_1205 (reverse)

seq1  TTTCATAACACTCCATCATGC-TTCAGTTCTTTA-TCAATGATAGAAGCA  48
      |||||||         ||||| ||||| |||||| |||||||||||||||
seq2  TTTCATA---------CATGCTTTCAGGTCTTTATTCAATGATAGAAGCA  41

seq1  AAAG--CATACCTAAAATGCCAAATAAAT-GCAAA-TATGCATTTTTCCA  94
      ||||  ||||||||||||||||||||||| ||||| |||||||||| |||
seq2  AAAGGCCATACCTAAAATGCCAAATAAATGGCAAATTATGCATTTTCCCA  91

seq1  GAT-AAATAGTGAA-TAATCTAGTATATTTCATAACTGTGATAACATATC  142
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  GATAAAATAGTGAATTAATCTAGTATATTTCATAACTGTGATAACATATC  141

seq1  AAGAAAATAAAAACAGTAAACTGTAAACAATCTTTAAAAAAAT-ACTCCC  191
      ||||||||||||||||||||||||||   ||||| |||||||| ||||||
seq2  AAGAAAATAAAAACAGTAAACTGTAA--CATCTTAAAAAAAATAACTCCC  189

seq1  TGAGGTGGAGTGAAGTTTTGGATATTTTGAAAA--GAAAATTGAACTCTG  239
      |||||||||||||||||||||||||||||||||   ||||||||||||||
seq2  TGAGGTGGAGTGAAGTTTTGGATATTTTGAAAAAGAAAAATTGAACTCTG  239

seq1  TAGTTGCATATGTCAATGCGTGTGAAGTTCCTGTTATTTATGAGAATGTG  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGCATATGTCAATGCGTGTGAAGTTCCTGTTATTTATGAGAATGTG  289

seq1  AAGTGTTTTTTTTTCCGTTTCTTGTTAATTGCTTATGACAGCTAAGAGTT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTTTTTTTCCGTTTCTTGTTAATTGCTTATGACAGCTAAGAGTT  339

seq1  AAAATATGGATCTCTTATATAATGCAAGAGAACAGCTGCAGTGCAGTCTG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGGATCTCTTATATAATGCAAGAGAACAGCTGCAGTGCAGTCTG  389

seq1  CTTCTGCTGATGCTCTTGACAATGTGTCTCCTAATACCCTAAAAACAGCC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTGATGCTCTTGACAATGTGTCTCCTAATACCCTAAAAACAGCC  439

seq1  TCTCCCTGCATGGCTGTAACTTCGCACATTCAGGCTCCAACAATTGGCAT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTGCATGGCTGTAACTTCGCACATTCAGGCTCCAACAATTGGCAT  489

seq1  AGTGAAATAGTCAAGTTCCATCCTGAGGAAAACCCATTTCCACCTATTGC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAATAGTCAAGTTCCATCCTGAGGAAAACCCATTTCCACCTATTGC  539

seq1  TGAGACATTGGGGGAAAGTTTTTTCACTGATGGCTGAATGCAAATTACTG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACATTGGGGGAAAGTTTTTTCACTGATGGCTGAATGCAAATTACTG  589

seq1  ATTACTGGCACTTATGATTCTTTCCTTGACTACTTAAGGATATAGATAAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGGCACTTATGATTCTTTCCTTGACTACTTAAGGATATAGATAAA  639

seq1  ATTGAACACAGGATATTTTGTCAACTAAATCTAGATAGAACTATAATAGT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACACAGGATATTTTGTCAACTAAATCTAGATAGAACTATAATAGT  689

seq1  AAACATATTAAAAGACAGAAAGGGATTATGTGGGACTTAAGTTATTTTAA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATATTAAAAGACAGAAAGGGATTATGTGGGACTTAAGTTATTTTAA  739

seq1  AGATGGAACACAAAAATCTGTTTATTTTAATTTAATTAATATTGTCTCTG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAACACAAAAATCTGTTTATTTTAATTTAATTAATATTGTCTCTG  789

seq1  ATGAAATTATAGCTATTTACCAAAAGAAAGTTTTTTTCCTTTATTTATTC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTATAGCTATTTACCAAAAGAAAGTTTTTTTCCTTTATTTATTC  839

seq1  ATTTAAAAATTTGTTTTTTATTTCAACCAGATTTACTTCACTTTCCTTCT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAATTTGTTTTTTATTTCAACCAGATTTACTTCACTTTCCTTCT  889

seq1  CCCTTTCCTAATCCAGCCCCTTGAGGAACCTCTCTCTACTTCTCTGGGTA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCTAATCCAGCCCCTTGAGGAACCTCTCTCTACTTCTCTGGGTA  939

seq1  TCCTTCCACCAATCCTTGCCATTACCTCATTCTCTAATTGGTAGACTCTT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCACCAATCCTTGCCATTACCTCATTCTCTAATTGGTAGACTCTT  989

seq1  TTTCTTTATTATTGTTACATATATGTGTATCTGCTCAAATATGTAAACAA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATTATTGTTACATATATGTGTATCTGCTCAAATATGTAAACAA  1039

seq1  CCCTGCTGAGCCAGTTTTTGTTATTTGTGTGTAGTGTTTCAGGGCTGACC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTGAGCCAGTTTTTGTTATTTGTGTGTAGTGTTTCAGGGCTGACC  1089

seq1  ACTGCTCATTGGGCAACCACTGTAAATGATCCTTCCTGGAATGAATGAAT  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCATTGGGCAACCACTGTAAATGATCCTTCCTGGAATGAATGAAT  1139

seq1  TC  1141
      ||
seq2  TC  1141


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