BAC Information

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BAC

Clone NameB6Ng01-187M17
Chromosome14 (Build37)
Map Location 74,961,995 - 74,963,122
singlet/doubletsinglet
Overlap genenone
Upstream geneSucla2, LOC100043734, EG629578, LOC629583
Downstream geneHtr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik, 4921509B22Rik, LOC100043176, Lcp1, Cpb2, Zc3h13, Gm912
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187M17.bB6Ng01-187M17.g
ACCGA012276GA012277
length1,2131,126
definitionB6Ng01-187M17.b B6Ng01-187M17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgttcgata
ttctgaagtctaccatcttgagttctttatatatgttggatattagcccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacatgccattgatgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gatcataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtttctataccagtaccatgcagtttttatcacaattgc
tctatagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggtttttagttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaaaatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacgccaagatattttaatacta
tttgtgactattgagaaggggtgttgattcccctaattctttctcagcct
gttatctttgtagagaaagaaaaggccatttgcactgtgttggaggtttt
attttttataccagcctacttctccgcagactgtctaatactgacgttaa
atgcgagttccttggtgagattttaaggcgaccttatatatcgtacatta
cactccgcaaagtaattgaactgccttccaattgaatcccgtgattcact
tcgtggtgcgcca
gaattcctggtagagaatgcttttgtaggtcaacaagtgacacaaagaaa
gagagatgaactacaaggaaagactgagaggggcagaaggaaaaatccag
gggagccaggatttgtactaaaatatggagtcaccagggactggaggcag
ggtgggatggggtctcctacaggcaggctacagcaggactaagacttagt
cttgagaggatagaatgggtagaggaaggatagtggaaaatcacccacct
atggctcagcccagtgtagccactgagggtccctggtagaaaggtttctg
agtataagtagatgatagaaaaaattgagataggctagaaggaaaggctg
agggtagggtaggaaatagctagagggtagggtaggaaatagctaagggg
ctactggggtcttcactgagaggtaaaatacacagggaatggaggtaggg
tgtgcagagagaggctcctatagtctatagaaaatctagaaagcaaatgt
agaatgaaaaagtagggggctttttacacttttacatttcaccaattact
aagtcatccaaggtttatgactttttattgactttctgtaattcttgtga
tgcagtatttcctatgaatgaacgagtggtccattaatatctttcaaata
tgataaaacaacaaaaacaactcaccatgggatacttcaaaaggtatgac
atgttgaccataactatccatgaatcttcactgcttcaaacacctgctac
acatatccttaagaaagatgaccctatacataaaagaaactgaagatttg
attatttagtaaacgttccactcttagaatgataaaaaaaaatcccaaac
aagcctcaacaaaaacctcaacacccccaaatcttattggattccttaag
aatcttaggatgaagtgaaggactcatttgactttgcccttatccccact
ccgcattctgggctgacataaatacattaggttaacgactttatgtcctt
atggtgatatagtaggattcctctctgaacgcagtttcaggctctgaatt
tctgtgcctgtggcaaatttctgctgcctttcaaagaagaaatcctggag
tctaaaaattagagaattgtcatgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74961995_74963122
seq2: B6Ng01-187M17.g_63_1188 (reverse)

seq1  CGCATG-CAATTCTCTAATTTTCTGACTCCAGGATTTCTTCTTTTAAAGG  49
      |||||| |||||||||||||||  |||||||||||||||||||| |||||
seq2  CGCATGACAATTCTCTAATTTTTAGACTCCAGGATTTCTTCTTTGAAAGG  50

seq1  CAGCCAGAAA-TTGCCACAGGCACAG-AATTCAGAAGCCTGAAAACTGCG  97
      ||| |||||| ||||||||||||||| ||||||| |||||| ||||||||
seq2  CAG-CAGAAATTTGCCACAGGCACAGAAATTCAG-AGCCTG-AAACTGCG  97

seq1  TTCA-AGAGGAATCCTACTTATATCA-CATAAAGACATTAAGTCGTTAAC  145
      |||| ||||||||||||| ||||||| ||||| ||||| |||||||||||
seq2  TTCAGAGAGGAATCCTAC-TATATCACCATAAGGACATAAAGTCGTTAAC  146

seq1  CTAATTGTATTTTATGTCAAGCCAAGAATGCGGAGTGGGGGATAA-GGCA  194
      |||| |||| |||||||| |||| |||||||||||| |||||||| ||||
seq2  CTAA-TGTA-TTTATGTC-AGCCCAGAATGCGGAGT-GGGGATAAGGGCA  192

seq1  AAGTCAAAATGAGTCCTTCACTTCATCCTAAGATTCTTAAGGAATCCAAT  244
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTC-AAATGAGTCCTTCACTTCATCCTAAGATTCTTAAGGAATCCAAT  241

seq1  AAGATTTGGGGGTGTTGAGGTTTTTGTTTGAGGCTTGTTTGG--ATTTTT  292
      |||||||||||||||||||||||||| |||||||||||||||   |||||
seq2  AAGATTTGGGGGTGTTGAGGTTTTTG-TTGAGGCTTGTTTGGGATTTTTT  290

seq1  TTTATCATTCTAAGAGTGGAACGTTTACTAAATAATCAAATCTTCAGTTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCATTCTAAGAGTGGAACGTTTACTAAATAATCAAATCTTCAGTTT  340

seq1  CTTTTATGTATAGGGTCATCTTTCTTAAGGATATGTGTAGCAGGTGTTTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATGTATAGGGTCATCTTTCTTAAGGATATGTGTAGCAGGTGTTTG  390

seq1  AAGCAGTGAAGATTCATGGATAGTTATGGTCAACATGTCATACCTTTTGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTGAAGATTCATGGATAGTTATGGTCAACATGTCATACCTTTTGA  440

seq1  AGTATCCCATGGTGAGTTGTTTTTGTTGTTTTATCATATTTGAAAGATAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCCATGGTGAGTTGTTTTTGTTGTTTTATCATATTTGAAAGATAT  490

seq1  TAATGGACCACTCGTTCATTCATAGGAAATACTGCATCACAAGAATTACA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGACCACTCGTTCATTCATAGGAAATACTGCATCACAAGAATTACA  540

seq1  GAAAGTCAATAAAAAGTCATAAACCTTGGATGACTTAGTAATTGGTGAAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCAATAAAAAGTCATAAACCTTGGATGACTTAGTAATTGGTGAAA  590

seq1  TGTAAAAGTGTAAAAAGCCCCCTACTTTTTCATTCTACATTTGCTTTCTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAGTGTAAAAAGCCCCCTACTTTTTCATTCTACATTTGCTTTCTA  640

seq1  GATTTTCTATAGACTATAGGAGCCTCTCTCTGCACACCCTACCTCCATTC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTATAGACTATAGGAGCCTCTCTCTGCACACCCTACCTCCATTC  690

seq1  CCTGTGTATTTTACCTCTCAGTGAAGACCCCAGTAGCCCCTTAGCTATTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTATTTTACCTCTCAGTGAAGACCCCAGTAGCCCCTTAGCTATTT  740

seq1  CCTACCCTACCCTCTAGCTATTTCCTACCCTACCCTCAGCCTTTCCTTCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCTACCCTCTAGCTATTTCCTACCCTACCCTCAGCCTTTCCTTCT  790

seq1  AGCCTATCTCAATTTTTTCTATCATCTACTTATACTCAGAAACCTTTCTA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATCTCAATTTTTTCTATCATCTACTTATACTCAGAAACCTTTCTA  840

seq1  CCAGGGACCCTCAGTGGCTACACTGGGCTGAGCCATAGGTGGGTGATTTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGACCCTCAGTGGCTACACTGGGCTGAGCCATAGGTGGGTGATTTT  890

seq1  CCACTATCCTTCCTCTACCCATTCTATCCTCTCAAGACTAAGTCTTAGTC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATCCTTCCTCTACCCATTCTATCCTCTCAAGACTAAGTCTTAGTC  940

seq1  CTGCTGTAGCCTGCCTGTAGGAGACCCCATCCCACCCTGCCTCCAGTCCC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTAGCCTGCCTGTAGGAGACCCCATCCCACCCTGCCTCCAGTCCC  990

seq1  TGGTGACTCCATATTTTAGTACAAATCCTGGCTCCCCTGGATTTTTCCTT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACTCCATATTTTAGTACAAATCCTGGCTCCCCTGGATTTTTCCTT  1040

seq1  CTGCCCCTCTCAGTCTTTCCTTGTAGTTCATCTCTCTTTCTTTGTGTCAC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCTCTCAGTCTTTCCTTGTAGTTCATCTCTCTTTCTTTGTGTCAC  1090

seq1  TTGTTGACCTACAAAAGCATTCTCTACCAGGAATTC  1128
      ||||||||||||||||||||||||||||||||||||
seq2  TTGTTGACCTACAAAAGCATTCTCTACCAGGAATTC  1126