BAC Information

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BAC

Clone NameB6Ng01-188C14
Chromosome14 (Build37)
Map Location 13,671,170 - 13,672,288
singlet/doubletsinglet
Overlap genenone
Upstream genePtprg, LOC100042441, 3830406C13Rik, EG667072, Fezf2, Cadps
Downstream geneEG432822, LOC100042022, LOC100042026, EG328354, Synpr, A430083B19Rik, EG382844, LOC100042045, Gm281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188C14.bB6Ng01-188C14.g
ACCGA012540GA012541
length1,2171,117
definitionB6Ng01-188C14.b B6Ng01-188C14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactaaggaatactgaatggctgagacacgcctgaaaaaatg
tccaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaaggcctaagatcaaatattaaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgctggtg
gaattgcaagctggtagaagtactccggaattcagtttggtggctcctca
gaaaattttatatagttctactggacaatccagcaataccactcctgggc
atatacccagagatgctccaacatgtaataaggacacatgttccactatg
ttcatagcagccttacttataatagcaagaagctggaaagaacccagatg
tccttcaacagaggaatagataaagaaaatgtggtatgtttcacaatgga
ctactactcagccattaaaaataataaatttatgaaattcttaggcagat
ggatctggaggatatcatactgagggaggtaacccaattacaaaagaagt
cacttgatatgcactcactgataagtggatattagcccagaaatttagac
tatccaagatacaatttgcaaaacacatgaaactcaagaagaaggaagac
caaagtgtggatactttgttcctccttagaattgggaacaaaatacccat
agagggagttacagagtcaaagtttggagctgagatggaaggaaggacca
tccagagactgccccacctggggatccatcacatagacagtcaccaaacc
cagacattattgtatatgccagcaaaattttgctgacagaaccctgatat
agctgtttcttgtgaggctatgccagtgcctggcaaatacagagagggtg
ctcacagtcatttattggatggaacacagggcccccagtggtggagctag
agaaagtacccaaggagctgaagggtctgcaacccttataggaggaacaa
catatgaactgaccagtaatgaactgaccagtacccccagagctcgtgtc
ttctagctgcatatataggagaagatggactagttgccctcattgggagg
aagagcctggtcttcgaggatatatgtccagtacaggaatggccagaaca
gaatggcagtgcttgctgccagccaggccaggggaggtataatgggggca
cattttgtgtgcagata
gaattcttttaaaggtctctgtattttaggaatatctcaaagggtgtttc
ttcaatagttctccaagctggagaggtaatggaggtttgggtcaaacaag
gtaatttttaaccaaaagaatggcttaaacaattagataatttattcata
atctgtaagaaaaatcattaagggggtgcacttgagtgatttgagaatat
gagaacaaatttcctattgcagcaattttgtgaattaaaaaaattcaaga
ccattctcttgtctacctgaccctgttttgctttgtgaaagcaaaatata
gcaactggagaggaagagggaagaaaaacaataatctatgttttcatgtt
cagggattatttgattccctggtaggcttgtcttgcttacttataagcat
accaaaatattcataatttaaaaattggcaggaaatgaagcagcaatcct
tctgtccctgttggaacagatcactgagttgggatttttctcctccccta
gagattcctttcagcatgtgccaatctcaaagtctgggaatgcaaataga
caaggtttgtgtgaaaaacagcaaggcaagccaagagtctcctgaaagtg
caccctaagacctcaaaagcatttcagttctagtaattgacatgtagaga
tatttttttatctcttaaaagatacatcccttgtcacttgagttgggttt
tgtaaagagagagctctgatacttttaccatttttttttgccagtgggat
tgttgaataaccctgaacaggagaatttggttagtggttcattgatttag
cagacacaccccgagtgcccactatgtatcagtttctgtgatgaaccctg
caaaaccaaagtggaatgggcaagttgtcaacttctgagcatcttgcagc
ctagtaggaaacacaggtaataagaggatataggtaacagccttgtggaa
tatcgaggacagattctgtgccttgggtaccatggggtctcctggaggag
ttccaatgtgggactatgaagcagatgagaaagcagagagcatgctgaca
gtgagctatgatccaatgtgttcctcaagagaagtgccaggaaggaaatt
cttgggtggttatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_13671170_13672288
seq2: B6Ng01-188C14.g_66_1182

seq1  GAATTCTTTTAAAGGTCTCTGTATTTTAGGAATATCTCAAAGGGTGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAAAGGTCTCTGTATTTTAGGAATATCTCAAAGGGTGTTTC  50

seq1  TTCAATAGTTCTCCAAGCTGGAGAGGTAATGGAGGTTTGGGTCAAACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAGTTCTCCAAGCTGGAGAGGTAATGGAGGTTTGGGTCAAACAAG  100

seq1  GTAATTTTTAACCAAAAGAATGGCTTAAACAATTAGATAATTTATTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTTTAACCAAAAGAATGGCTTAAACAATTAGATAATTTATTCATA  150

seq1  ATCTGTAAGAAAAATCATTAAGGGGGTGCACTTGAGTGATTTGAGAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAAGAAAAATCATTAAGGGGGTGCACTTGAGTGATTTGAGAATAT  200

seq1  GAGAACAAATTTCCTATTGCAGCAATTTTGTGAATTAAAAAAATTCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAAATTTCCTATTGCAGCAATTTTGTGAATTAAAAAAATTCAAGA  250

seq1  CCATTCTCTTGTCTACCTGACCCTGTTTTGCTTTGTGAAAGCAAAATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTCTTGTCTACCTGACCCTGTTTTGCTTTGTGAAAGCAAAATATA  300

seq1  GCAACTGGAGAGGAAGAGGGAAGAAAAACAATAATCTATGTTTTCATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGGAGAGGAAGAGGGAAGAAAAACAATAATCTATGTTTTCATGTT  350

seq1  CAGGGATTATTTGATTCCCTGGTAGGCTTGTCTTGCTTACTTATAAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATTATTTGATTCCCTGGTAGGCTTGTCTTGCTTACTTATAAGCAT  400

seq1  ACCAAAATATTCATAATTTAAAAATTGGCAGGAAATGAAGCAGCAATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAATATTCATAATTTAAAAATTGGCAGGAAATGAAGCAGCAATCCT  450

seq1  TCTGTCCCTGTTGGAACAGATCACTGAGTTGGGATTTTTCTCCTCCCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCCTGTTGGAACAGATCACTGAGTTGGGATTTTTCTCCTCCCCTA  500

seq1  GAGATTCCTTTCAGCATGTGCCAATCTCAAAGTCTGGGAATGCAAATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCCTTTCAGCATGTGCCAATCTCAAAGTCTGGGAATGCAAATAGA  550

seq1  CAAGGTTTGTGTGAAAAACAGCAAGGCAAGCCAAGAGTCTCCTGAAAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTTGTGTGAAAAACAGCAAGGCAAGCCAAGAGTCTCCTGAAAGTG  600

seq1  CACCCTAAGACCTCAAAAGCATTTCAGTTCTAGTAATTGACATGTAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTAAGACCTCAAAAGCATTTCAGTTCTAGTAATTGACATGTAGAGA  650

seq1  TATTTTTTTATCTCTTAAAAGATACATCCCTTGTCACTTGAGTTGGGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTATCTCTTAAAAGATACATCCCTTGTCACTTGAGTTGGGTTT  700

seq1  TGTAAAGAGAGAGCTCTGATACTTTTACCATTTTTTTTTGCCAGTGGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGAGAGAGCTCTGATACTTTTACCATTTTTTTTTGCCAGTGGGAT  750

seq1  TGTTGAATAACCCTGAACAGGAGAATTTGGTTAGTGGTTCATTGATTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAATAACCCTGAACAGGAGAATTTGGTTAGTGGTTCATTGATTTAG  800

seq1  CAGACACACCCCGAGTGCCCACTATGTATCAGTTTCTGTGATGAACCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACACCCCGAGTGCCCACTATGTATCAGTTTCTGTGATGAACCCTG  850

seq1  CAAAACCAAAGTGGAATGGGCAAGTTGTCAACTTCTGAGCATCTTGCAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCAAAGTGGAATGGGCAAGTTGTCAACTTCTGAGCATCTTGCAGC  900

seq1  CTAGTAGGAAACACAGGTAATAAGAGGATATAGGTAACAGCC-TGTGGAA  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTAGTAGGAAACACAGGTAATAAGAGGATATAGGTAACAGCCTTGTGGAA  950

seq1  TATTCGAGGACAGA-TCTGTGCCTTGGGTACCATGGGGTCCCCTGGGAGG  998
      || ||||||||||| ||||||||||||||||||||||||| ||| |||||
seq2  TA-TCGAGGACAGATTCTGTGCCTTGGGTACCATGGGGTCTCCT-GGAGG  998

seq1  AGTTCCAAATGTGGGACTATGAAGCAGAATGAGAAAGCAGAGAAGCATGC  1048
      |||||| |||||||||||||||||||| |||||||||||||| |||||||
seq2  AGTTCC-AATGTGGGACTATGAAGCAG-ATGAGAAAGCAGAG-AGCATGC  1045

seq1  TGACAGTGAGCTATGATCCAATGTG-TCTCCAAGAGGAAAGTGCCAGGAA  1097
      ||||||||||||||||||||||||| ||  ||||||  ||||||||||||
seq2  TGACAGTGAGCTATGATCCAATGTGTTCCTCAAGAG--AAGTGCCAGGAA  1093

seq1  AGGGAATC-TGGGTGG-TATGGGA  1119
       |  | || ||||||| |||||||
seq2  GGAAATTCTTGGGTGGTTATGGGA  1117