BAC Information

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BAC

Clone NameB6Ng01-188F22
Chromosome14 (Build37)
Map Location 13,834,132 - 13,969,248
singlet/doubletdoublet
Overlap genenone
Upstream genePtprg, 3830406C13Rik, EG667072, Fezf2, Cadps, EG432822, LOC100042022, LOC100042026
Downstream geneEG328354, Synpr, A430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188F22.bB6Ng01-188F22.g
ACCGA012686GA012687
length948532
definitionB6Ng01-188F22.b B6Ng01-188F22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,834,132 - 13,834,856)(13,968,711 - 13,969,248)
sequence
gaattcacccttgtctttcccaagaaccatgttttatcagctaggctgcc
catctgggcctgtccctgtttctgcccctgcagacaagtgatttagggta
taatgcattttgagggagactctaagccctaagatctccagacatcataa
tagacacacaaatacaagcattagtgctggtctcccagttctgccagatc
tctggaattctctgtactcttgacctgctcctcaaatttaaatctcttgc
cagcccatgtcctgacatacagagtcccaaacatctgttacttggaaact
tctacttggatgtcacacagatttcagacttataagattgacagatgaac
tatcttttgagtatatgccaagagtggaataactggatcttgggttaaat
cgatcccagttttctgaagagtcacagtattgatttccatagtggctgta
tgtgtttgcactgccatcagcaatggaaaagtcttcctctttgctccata
tcctctctaggatgagctgtcatttgtgttattgatcttggttattcaga
catttgtaagatagaatatcaaagtatttttcatttgcatttccctgcca
caaggacactggttcaactatgtttatagcagcagtaatcataatagaca
gacactggaaacaacctagatgttctcaactgaaaaatggataaagaaat
gtacatttatacaatgtaatattactcagccgttaggaaaaatgacatca
tggaacttgcaagccaatggatgaaactaggaaaaaatcatcctgaggga
ggcaatgcaaacccagaaagacaagcatgatatgtactcacttataagtg
catattagctcttaagtaaaggacaatcactcaacaatccatagacccct
ttggggttagatcaagaggaagggttgaggacagcaggaggaatgctg
taggctttaaactcttgtccccaggcttgcaaggcaaacattttgccact
aagcgatctaccagacttcagtctattcctaagatggacagttctcctgg
aatcacaggatttgttccaagctgggctgctgtttctgtgcaagggacgt
tgggattttctttccctggcactctggagaattccattttggaagttctc
ttattctgaattgaagagttttttctgtgttccactcccataccatagaa
cacttgtcagtctaattggaacagaaaaagattcactaaaaacaattgtt
ttgaaatacgaaagtgcataaattttttactcttgccttgataccctctg
tatatttacattctccctccctctttctctcactatgtgtgcttttgttt
atgtgaaaatatttgaatcgcatgtgtgtgtgtttcatgtgtatctctgt
gtgtgtctatgtgtgtgtgtgtatacatatatatgtgtatatgtgtgtgt
atacatatatgtgtgtatatgtatgtatgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_13834132_13834856
seq2: B6Ng01-188F22.b_49_773

seq1  GAATTCACCCTTGTCTTTCCCAAGAACCATGTTTTATCAGCTAGGCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTTGTCTTTCCCAAGAACCATGTTTTATCAGCTAGGCTGCC  50

seq1  CATCTGGGCCTGTCCCTGTTTCTGCCCCTGCAGACAAGTGATTTAGGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGGCCTGTCCCTGTTTCTGCCCCTGCAGACAAGTGATTTAGGGTA  100

seq1  TAATGCATTTTGAGGGAGACTCTAAGCCCTAAGATCTCCAGACATCATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCATTTTGAGGGAGACTCTAAGCCCTAAGATCTCCAGACATCATAA  150

seq1  TAGACACACAAATACAAGCATTAGTGCTGGTCTCCCAGTTCTGCCAGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACACAAATACAAGCATTAGTGCTGGTCTCCCAGTTCTGCCAGATC  200

seq1  TCTGGAATTCTCTGTACTCTTGACCTGCTCCTCAAATTTAAATCTCTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATTCTCTGTACTCTTGACCTGCTCCTCAAATTTAAATCTCTTGC  250

seq1  CAGCCCATGTCCTGACATACAGAGTCCCAAACATCTGTTACTTGGAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCATGTCCTGACATACAGAGTCCCAAACATCTGTTACTTGGAAACT  300

seq1  TCTACTTGGATGTCACACAGATTTCAGACTTATAAGATTGACAGATGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTGGATGTCACACAGATTTCAGACTTATAAGATTGACAGATGAAC  350

seq1  TATCTTTTGAGTATATGCCAAGAGTGGAATAACTGGATCTTGGGTTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTGAGTATATGCCAAGAGTGGAATAACTGGATCTTGGGTTAAAT  400

seq1  CGATCCCAGTTTTCTGAAGAGTCACAGTATTGATTTCCATAGTGGCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCCCAGTTTTCTGAAGAGTCACAGTATTGATTTCCATAGTGGCTGTA  450

seq1  TGTGTTTGCACTGCCATCAGCAATGGAAAAGTCTTCCTCTTTGCTCCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGCACTGCCATCAGCAATGGAAAAGTCTTCCTCTTTGCTCCATA  500

seq1  TCCTCTCTAGGATGAGCTGTCATTTGTGTTATTGATCTTGGTTATTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTAGGATGAGCTGTCATTTGTGTTATTGATCTTGGTTATTCAGA  550

seq1  CATTTGTAAGATAGAATATCAAAGTATTTTTCATTTGCATTTCCCTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTAAGATAGAATATCAAAGTATTTTTCATTTGCATTTCCCTGCCA  600

seq1  CAAGGACACTGGTTCAACTATGTTTATAGCAGCAGTAATCATAATAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACACTGGTTCAACTATGTTTATAGCAGCAGTAATCATAATAGACA  650

seq1  GACACTGGAAACAACCTAGATGTTCTCAACTGAAAAATGGATAAAGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGGAAACAACCTAGATGTTCTCAACTGAAAAATGGATAAAGAAAT  700

seq1  GTACATTTATACAATGTAATATTAC  725
      |||||||||||||||||||||||||
seq2  GTACATTTATACAATGTAATATTAC  725

seq1: chr14_13968711_13969248
seq2: B6Ng01-188F22.g_65_602 (reverse)

seq1  ACACATACATACATATACACACATATATGTATACACACACATATACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACATACATATACACACATATATGTATACACACACATATACACAT  50

seq1  ATATATGTATACACACACACACATAGACACACACAGAGATACACATGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTATACACACACACACATAGACACACACAGAGATACACATGAAA  100

seq1  CACACACACATGCGATTCAAATATTTTCACATAAACAAAAGCACACATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATGCGATTCAAATATTTTCACATAAACAAAAGCACACATAG  150

seq1  TGAGAGAAAGAGGGAGGGAGAATGTAAATATACAGAGGGTATCAAGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAAAGAGGGAGGGAGAATGTAAATATACAGAGGGTATCAAGGCAA  200

seq1  GAGTAAAAAATTTATGCACTTTCGTATTTCAAAACAATTGTTTTTAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAAAATTTATGCACTTTCGTATTTCAAAACAATTGTTTTTAGTGA  250

seq1  ATCTTTTTCTGTTCCAATTAGACTGACAAGTGTTCTATGGTATGGGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTCTGTTCCAATTAGACTGACAAGTGTTCTATGGTATGGGAGTG  300

seq1  GAACACAGAAAAAACTCTTCAATTCAGAATAAGAGAACTTCCAAAATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAGAAAAAACTCTTCAATTCAGAATAAGAGAACTTCCAAAATGGA  350

seq1  ATTCTCCAGAGTGCCAGGGAAAGAAAATCCCAACGTCCCTTGCACAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCAGAGTGCCAGGGAAAGAAAATCCCAACGTCCCTTGCACAGAAA  400

seq1  CAGCAGCCCAGCTTGGAACAAATCCTGTGATTCCAGGAGAACTGTCCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCCCAGCTTGGAACAAATCCTGTGATTCCAGGAGAACTGTCCATC  450

seq1  TTAGGAATAGACTGAAGTCTGGTAGATCGCTTAGTGGCAAAATGTTTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAATAGACTGAAGTCTGGTAGATCGCTTAGTGGCAAAATGTTTGCC  500

seq1  TTGCAAGCCTGGGGACAAGAGTTTAAAGCCTAGAATTC  538
      ||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGCCTGGGGACAAGAGTTTAAAGCCTAGAATTC  538