BAC Information

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BAC

Clone NameB6Ng01-188K15
Chromosome14 (Build37)
Map Location 90,772,899 - 90,774,018
singlet/doubletsinglet
Overlap genenone
Upstream geneEG328451
Downstream geneLOC100043336, EG639558
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188K15.bB6Ng01-188K15.g
ACCGA012901GA012902
length1,1911,118
definitionB6Ng01-188K15.b B6Ng01-188K15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcttgcgcgtacaaggcttgtttactagttaggcacagcgga
ggcccgcgccatcttataatggcaattgctcgcagcacgtaccggctttc
cacaatatggatctaaagtcactgctcatgatgatgatgatggaggacta
taagttataaaaataacccccttaaagaaatacaggagaatacatacaaa
caggtgaaagaattgaacaaaaccatccaggatctaaaaatggaaataga
aataataaagaaaacccaaaggaagacaactctggaaatagaaaagctaa
gaaaaatgtcaggagccatagatgcaagcataacaaacaaatttcaagag
atgaaaagagaatctcaggtgcagaagataacatagaaaatattgacata
acaatcaaagaaaatgcaaaatgcaaaaagatcctaactcaaaacataca
ggaaatccaggacaaaatgagaaaaccaaacctacggataataggagtag
atgagaatgaagattttcaacttaaagggccagcaaataccttcaacaaa
attatagaagaaaacttcccaaacctaaagaaaggcatgcccatgaacat
acaagaagcctacagaactccaaacagactgtaccagaaaagaaattcct
ccgtcacataataatcaaaataccaaacacacaaaacaaataaagaatat
taaaagcagtaagggaaaaaggtaatttaacatataaaggcagacctatc
cgaatttcacctgacatctcccccagagactatgaaagccagaagatctt
agagatacagactctaagagaatgaaaatgccagcccaggctaatatacc
cagaaatattctcaattaccatagacagaaaaaaaccatgaaaggtattc
catgagaaaaccaaatttacacaaaatctttccacaaatccagcctttca
aagggattacaaagagaaaactccaacaccaggagggaaactaccctcta
gaaaagcaagaacgtgttctttcaacaaactaaaaagaaaaatagccaca
tgaacaaaattcactctacacaaaaatatcagaaggcacactactttcta
atctctatagttaaatggactcatcccaattaaaatcatgaattgactta
cgactgctatataaacggaaacccaaccagtttacctttgt
gaattcttagtgtttctgcttgaggtaaaggctttgattcaaatgaaata
atagaacactgtaattatgcttattcaaaatcctattaaagtgcaattaa
tttatactttatgctgttatgtttaattttttaagcgtggcttgtatcta
ttttagtctttatatttaagccctgttgggtgtaacttaataggattttc
ttaacagtcatttacgtcttctccttatagtaagctttcatttgcttctg
ttacaattcttcaactagtccattggagtgttttaccagcagaaaacttc
atatttgcactttgagtgttctgtatcttcatcttctaaggtccagctgc
taaaaaggtgtatccgaaaggctagtaccaactctgaaatattttaaaac
ccctgagaatagcacaatcaaacagggaaatataattttaaaaagatgcc
taaggggacagttcagatataaaggatagcaaggacaagtgaagtaaact
atgaaacacagctgaatcaacattatttctatctggttcacatacggaca
aaatctggaaaatccactgaaacctgacaaaccaattttcagctaatcta
atagctgacctctaaaatatataaaaaactcagaccatccatgtcttacc
tgacctgtaaaacacagttaaataagttgaacttttaaaaaccataatga
cttttgaacagtagcttagaaatgatgaaaaacaacaaaataataatgtt
attattgagattgtatctcaggtttgctttgaatttttttcttaattatt
taaggatatttattatctgctacacagatttgtagtttatacttaggaat
tctaattaaaagcaataatcacctaaaacaagttaatgatataaataaaa
ttaaaatataattttccttcattattatattttttttcagtcctaagaat
caaactcactgggcaagtgcttaactacttaaatctggaaaagtcatcat
gattttaataattctaaaacctaatttttatttgaaattattcatagtat
ttaaaaatataaaatgtataacaatgtaactttttgatgttaaaaatatt
gcaaaaatttgaaggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90772899_90774018
seq2: B6Ng01-188K15.g_65_1182 (reverse)

seq1  ATTCTTTCAAAATTTTTTGCAATA-TTATAACATTCAAAAAGTTTACAAT  49
      |||| ||||||  ||||||||||| || ||||| |||||||| ||||| |
seq2  ATTCCTTCAAA--TTTTTGCAATATTTTTAACA-TCAAAAAG-TTACATT  46

seq1  TGTATACATTTTATA-TTTTAAATACTAATTGAATAATTTCAAAT-AAAA  97
        ||||||||||||| ||||||||||||  ||||||||||||||| ||||
seq2  GTTATACATTTTATATTTTTAAATACTA--TGAATAATTTCAAATAAAAA  94

seq1  TTAGGTTTTAGAATTTATTAAAATCATGATGACTTTTCCAGA-TTAAGTA  146
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  TTAGGTTTTAGAA-TTATTAAAATCATGATGACTTTTCCAGATTTAAGTA  143

seq1  GTTAAGCACTTGCCCAGTGAGTTTGATTCTTAGGACTG-AAAAAAATATA  195
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTTAAGCACTTGCCCAGTGAGTTTGATTCTTAGGACTGAAAAAAAATATA  193

seq1  ATAATGAAGGAAAATTATATTTTAATTTTATTTATATCATTAACTTGTTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAAGGAAAATTATATTTTAATTTTATTTATATCATTAACTTGTTT  243

seq1  TAGGTGATTATTGCTTTTAATTAGAATTCCTAAGTATAAACTACAAATCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGATTATTGCTTTTAATTAGAATTCCTAAGTATAAACTACAAATCT  293

seq1  GTGTAGCAGATAATAAATATCCTTAAATAATTAAGAAAAAAATTCAAAGC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGCAGATAATAAATATCCTTAAATAATTAAGAAAAAAATTCAAAGC  343

seq1  AAACCTGAGATACAATCTCAATAATAACATTATTATTTTGTTGTTTTTCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGAGATACAATCTCAATAATAACATTATTATTTTGTTGTTTTTCA  393

seq1  TCATTTCTAAGCTACTGTTCAAAAGTCATTATGGTTTTTAAAAGTTCAAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTAAGCTACTGTTCAAAAGTCATTATGGTTTTTAAAAGTTCAAC  443

seq1  TTATTTAACTGTGTTTTACAGGTCAGGTAAGACATGGATGGTCTGAGTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAACTGTGTTTTACAGGTCAGGTAAGACATGGATGGTCTGAGTTT  493

seq1  TTTATATATTTTAGAGGTCAGCTATTAGATTAGCTGAAAATTGGTTTGTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATTTTAGAGGTCAGCTATTAGATTAGCTGAAAATTGGTTTGTC  543

seq1  AGGTTTCAGTGGATTTTCCAGATTTTGTCCGTATGTGAACCAGATAGAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCAGTGGATTTTCCAGATTTTGTCCGTATGTGAACCAGATAGAAA  593

seq1  TAATGTTGATTCAGCTGTGTTTCATAGTTTACTTCACTTGTCCTTGCTAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTGATTCAGCTGTGTTTCATAGTTTACTTCACTTGTCCTTGCTAT  643

seq1  CCTTTATATCTGAACTGTCCCCTTAGGCATCTTTTTAAAATTATATTTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATATCTGAACTGTCCCCTTAGGCATCTTTTTAAAATTATATTTCC  693

seq1  CTGTTTGATTGTGCTATTCTCAGGGGTTTTAAAATATTTCAGAGTTGGTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGATTGTGCTATTCTCAGGGGTTTTAAAATATTTCAGAGTTGGTA  743

seq1  CTAGCCTTTCGGATACACCTTTTTAGCAGCTGGACCTTAGAAGATGAAGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTTTCGGATACACCTTTTTAGCAGCTGGACCTTAGAAGATGAAGA  793

seq1  TACAGAACACTCAAAGTGCAAATATGAAGTTTTCTGCTGGTAAAACACTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAACACTCAAAGTGCAAATATGAAGTTTTCTGCTGGTAAAACACTC  843

seq1  CAATGGACTAGTTGAAGAATTGTAACAGAAGCAAATGAAAGCTTACTATA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGACTAGTTGAAGAATTGTAACAGAAGCAAATGAAAGCTTACTATA  893

seq1  AGGAGAAGACGTAAATGACTGTTAAGAAAATCCTATTAAGTTACACCCAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAGACGTAAATGACTGTTAAGAAAATCCTATTAAGTTACACCCAA  943

seq1  CAGGGCTTAAATATAAAGACTAAAATAGATACAAGCCACGCTTAAAAAAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTTAAATATAAAGACTAAAATAGATACAAGCCACGCTTAAAAAAT  993

seq1  TAAACATAACAGCATAAAGTATAAATTAATTGCACTTTAATAGGATTTTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATAACAGCATAAAGTATAAATTAATTGCACTTTAATAGGATTTTG  1043

seq1  AATAAGCATAATTACAGTGTTCTATTATTTCATTTGAATCAAAGCCTTTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCATAATTACAGTGTTCTATTATTTCATTTGAATCAAAGCCTTTA  1093

seq1  CCTCAAGCAGAAACACTAAGAATTC  1120
      |||||||||||||||||||||||||
seq2  CCTCAAGCAGAAACACTAAGAATTC  1118