BAC Information

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BAC

Clone NameB6Ng01-188N18
Chromosome14 (Build37)
Map Location 87,651,603 - 87,652,697
singlet/doubletsinglet
Overlap geneEG665324
Upstream geneEG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
Downstream geneTdrd3, LOC100043317, LOC100043780
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188N18.bB6Ng01-188N18.g
ACCGA013043GA013044
length1,0071,087
definitionB6Ng01-188N18.b B6Ng01-188N18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgagtggttgagaagtacctaaagaaatg
ttcaacatccttagtcaccaaggagattcaaatcaaaacaaccctgagat
tctacctcacacaggtcagaatggctaagatcaaaaactcaggtgacagc
acatgctgcagatactggaacactcctccattgctggtgggattgaaagc
tggtacaaccactctggaaatcagtttagcggtttttcagaaaattggac
agagtacttcctgaggactcagctataccactcctgggcatttacccaga
agatgctccaaccggtaagaaggacacatgctccactatgttcatagcag
ccttatttataatagccagaagctggaaaaaacccagattcccctcaaca
gaggaatggatacagaaaatgtggtacattatacaatggagtactactca
gctattaaaaagaatgaatttatgaaattcctagggaaatggatagaact
agaaaatatcctgagtgaggtaacccagtgaaaaaagaacacacatggta
tatactcactgacaagtagatattaacaacaatgctttcaatattgtttc
aataattgtttctctctgataccaaaataaaaatgacatttgaagactaa
ctataaaagataggtaacaatacatcataaaatcatttccctatttaaaa
tattaaaatgctttccataccgaaccaacccatgaagattctaagcctgg
aaggtttattagaacagctgagcaaataataattttaaaatatatcctat
agaagaatacaaactgatccattcctatctccttgtactaaggtcaaatc
taagtggattaaggatctccacataaaccaaagacactgaaacttattga
ggagaaagtagggaaaagcctcgaagataagggtacaggggaaaattcct
gaatagaacagcaatggctttgtgctgtaagatcgagaatcgaccatcat
aagattg
gaattcctacaatttgacaggaaaattaataaccagattgaaaataaact
agtcagtgctgccagtggttgtgtggatgtaggagagctggccctgcccc
tccttggttgcagctagcctctcctcagttgatggcttctggtgggaatg
gaggtggagaaaactctccttcccttgcagggctggcaactaggaattca
acaatgctccagtgagcatatgaacaacacaaaatggcttgtttttcttt
ctttaaacttttttttttttttttttttttttttgcggaggaagatgtgg
gaacacggaaaggtgagcaagttcagggtgcatgatgtgagagtcccaaa
taatcaataaagagatgaactagccacttaggtagatctctctatagtaa
tgtttagaaagtttgggaagaagttctgcattagtagtcatcaagtgaac
actaatgagaagtacagtggacccacatactttgtattatgctacactga
taacaatatgctaacatgggatctctgttggttttaattcattaatttgt
gtaggatgtgagacattttgcttaacataaattggaagttatctttggca
tctggagactaaagcacaccctaatgagtagatttgccaatttttccttc
taccattggtgttcagttcatagccatctcggcataaaagcggaaactgt
caccttcactgttccacttattcttgcagcatctcaagtatcaaaatttg
attttcttaaaaatgctaatttttaaaacagcagagataagattcaaggg
atgcttgcttagaggaggtttattttattagggaaaagacttatcctttg
gaaattattatcataattatcagtaggaacccattctatggtttattatt
aaagcaaagtcccattaggctagccgcagaccggatgtggattacagtgg
ggatatcctgactgaataggctctgtatcagctcaaatgtcagtcaggga
atcagggggcgaggctatcatggctatgatggttattcagaattggtgaa
agactttctctggaatcttcgaactcttgtacaggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_87651603_87652697
seq2: B6Ng01-188N18.g_67_1153

seq1  GAATTCCTACAATTTGACAGGAAAATTAATAACCAGATTGAAAATAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACAATTTGACAGGAAAATTAATAACCAGATTGAAAATAAACT  50

seq1  AGTCAGTGCTGCCAGTGGTTGTGTGGATGTAGGAGAGCTGGCCCTGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTGCTGCCAGTGGTTGTGTGGATGTAGGAGAGCTGGCCCTGCCCC  100

seq1  TCCTTGGTTGCAGCTAGCCTCTCCTCAGTTGATGGCTTCTGGTGGGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGTTGCAGCTAGCCTCTCCTCAGTTGATGGCTTCTGGTGGGAATG  150

seq1  GAGGTGGAGAAAACTCTCCTTCCCTTGCAGGGCTGGCAACTAGGAATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGAGAAAACTCTCCTTCCCTTGCAGGGCTGGCAACTAGGAATTCA  200

seq1  ACAATGCTCCAGTGAGCATATGAACAACACAAAATGGCTTGTTTTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTCCAGTGAGCATATGAACAACACAAAATGGCTTGTTTTTCTTT  250

seq1  CTTTAAACTTTTTTTTTTTTTTTTTTTTTTTTTTGCGGAGGAAGATGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAACTTTTTTTTTTTTTTTTTTTTTTTTTTGCGGAGGAAGATGTGG  300

seq1  GAACACGGAAAGGTGAGCAAGTTCAGGGTGCATGATGTGAGAGTCCCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACGGAAAGGTGAGCAAGTTCAGGGTGCATGATGTGAGAGTCCCAAA  350

seq1  TAATCAATAAAGAGATGAACTAGCCACTTAGGTAGATCTCTCTATAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAATAAAGAGATGAACTAGCCACTTAGGTAGATCTCTCTATAGTAA  400

seq1  TGTTTAGAAAGTTTGGGAAGAAGTTCTGCATTAGTAGTCATCAAGTGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGAAAGTTTGGGAAGAAGTTCTGCATTAGTAGTCATCAAGTGAAC  450

seq1  ACTAATGAGAAGTACAGTGGACCCACATACTTTGTATTATGCTACACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGAGAAGTACAGTGGACCCACATACTTTGTATTATGCTACACTGA  500

seq1  TAACAATATGCTAACATGGGATCTCTGTTGGTTTTAATTCATTAATTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATATGCTAACATGGGATCTCTGTTGGTTTTAATTCATTAATTTGT  550

seq1  GTAGGATGTGAGACATTTTGCTTAACATAAATTGGAAGTTATCTTTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATGTGAGACATTTTGCTTAACATAAATTGGAAGTTATCTTTGGCA  600

seq1  TCTGGAGACTAAAGCACACCCTAATGAGTAGATTTGCCAATTTTTCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGACTAAAGCACACCCTAATGAGTAGATTTGCCAATTTTTCCTTC  650

seq1  TACCATTGGTGTTCAGTTCATAGCCATCTCGGCATAAAAGCGGAAACTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTGGTGTTCAGTTCATAGCCATCTCGGCATAAAAGCGGAAACTGT  700

seq1  CA-CTTCACTGTTCCACTTATTCTTGCAGCATCTCAAGTATCAAAA-TTG  748
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACCTTCACTGTTCCACTTATTCTTGCAGCATCTCAAGTATCAAAATTTG  750

seq1  ATTTTCTTAAAAATGCTAATTTTTAAAACAGCAGAGATAAGATTCAA-GG  797
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTTTCTTAAAAATGCTAATTTTTAAAACAGCAGAGATAAGATTCAAGGG  800

seq1  ATGCTTGCTTAGAGGAGGTTTA-TTTATTAGGGAAAAGACTTATCCTTTG  846
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGCTTGCTTAGAGGAGGTTTATTTTATTAGGGAAAAGACTTATCCTTTG  850

seq1  AAAATTATTATCATAATTATCAGTAAGAACCCAATTCTAT-GTTTATTAT  895
       |||||||||||||||||||||||| |||||| ||||||| |||||||||
seq2  GAAATTATTATCATAATTATCAGTAGGAACCC-ATTCTATGGTTTATTAT  899

seq1  TAAAGCAAAGTCCCCATTAGGCTAG-CGCAAGACGGATGTTGATTACAGT  944
      ||||||||||| ||||||||||||| ||||   ||||||| |||||||||
seq2  TAAAGCAAAGT-CCCATTAGGCTAGCCGCAGACCGGATGTGGATTACAGT  948

seq1  -GGGATAT-CTGACTGAATAGGCTCTGTAATCAGCTTCAAAATGTCAGTC  992
       ||||||| ||||||||||||||||||| |||||||   |||||||||||
seq2  GGGGATATCCTGACTGAATAGGCTCTGT-ATCAGCT--CAAATGTCAGTC  995

seq1  AGGGAATCAGGGGGGCAGAGGCTATTCAGTGGCTATGTATGTATTAATTT  1042
      ||||||||||||||   ||||||| ||| |||||||| |||  |||   |
seq2  AGGGAATCAGGGGG--CGAGGCTA-TCA-TGGCTATG-ATG-GTTA---T  1036

seq1  TCAGAATT-GTGAAAGACTTCCTCTTGACATCTTCCGACTTCCTTGTACA  1091
      |||||||| ||||||||||| |||| || ||||||  |||  ||||||||
seq2  TCAGAATTGGTGAAAGACTTTCTCTGGA-ATCTTCGAACT--CTTGTACA  1083

seq1  GGTA  1095
      ||||
seq2  GGTA  1087