BAC Information

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BAC

Clone NameB6Ng01-189K16
Chromosome14 (Build37)
Map Location 10,122,701 - 10,234,363
singlet/doubletdoublet
Overlap genenone
Upstream geneBC055107, Oit1, LOC667005, 4930452B06Rik, LOC100041948
Downstream geneFhit, LOC100042415
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189K16.bB6Ng01-189K16.g
ACCGA013627GA013628
length1,1571,073
definitionB6Ng01-189K16.b B6Ng01-189K16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,122,701 - 10,123,860)(10,233,284 - 10,234,363)
sequence
gaattctccatggtctgagagtttttgcttgatggatcagtgttccaaag
gattctatatgttcaatccttgttggaggctgagagttaacgtagaaatc
accattgcggtttagaatcatagttatgagctgatttgggtaaacttgct
ctatacaaggcatttagtaaacaattttagttttatgaaccatagtttta
ttgcactacccaaccttaacactggcagaaataaatatccatagtctgtg
tagtggctaatctgggttgtcaactggtctcaccagaaaagagctaatgt
tagttgaggtattgtctacatcagattagtctgtgaccgtgtttgtgagg
gtattttcttgactgccaattgatgtcttaggagattccagcccactgca
ggaagtactatccataaacaggtaggtctgagatgtataaggaagaggag
cctgggagcaagccagtaagaagtgttcctttatagtttctgccttcagg
ttcctgctttgagttcctgcctgacttcgctcaaagatgggcctgaaatg
taagctgaaataaactctttcattcccaatttggttttgattatagtgtt
tatcacagcaacagaaaacaaattagaaaaagatgtaaatgaaaaaatat
gactgttctgacagattcccaaccaaagtagggagccaattgcactgcac
ctgtgggatggaatgagtttactgacttctaaattagctgactctgtttt
tcactgtccagatggttataaaatctctaagcttattacctttcccatgc
ctcaataggacattcattcataaaatgagaatatttacagaatctgcttt
agaaaagctattgtaggattgtctgaattcattcagaccaaaagccttca
aaataataagcacaaaactaaatgctaattgtgtttatttgaagtaatgt
agtgcatagatcattaataaatgcattgctaggagaccttgtaagtttca
actgtactgtgatacaactcttctttcttttaatttcctgctgtccagat
attgggtccatgtccaccccacctctcagcataaaaccagttaaagaaat
gtagatgaaagaatgagctgcagtcttgttcccattaatttacatcaccc
attcccc

gaattccacccacctgcccaccaggtccttcaatgttcgctttctgtgaa
ccaaatttccatttcagccagtgccagaataggcttctaggacagtgaga
ttcctggtctggggaaatcagaggcaaatacacacgcccattctgtagat
tcctgctttggagataaatattcctgttcttaaaacacagagaggaatca
tgtttctaaatatttattctcttgggcactattttgaaattccaaaatta
aaaaaaaaaaccaaacaaacaaaccaaaaaacaaacaaacaaaaactcca
tgcaactgataaatatagagaactcatgtgttctttttgcagatatactt
atcttaaaattttatttcttgtccattccattaatatttacttttataag
ctattggagtgttctctcctctgtgtttagatatcctttagtctatgctt
tttcaaagtaaagaggctttattacataccatgtcattcaggacaggcaa
ctttgctgggttgtttttacttattcttcagtgtgtgatttcaaggcctt
ttggtaatttacacctatttaataaagatcttaggaaagcttttcttgca
ttttatcttcttgtgatttgtttattttctaaaaccctgaaccaaagata
tgactggagtccttatctgctcagggatgttatactccactatcatgcat
tcctgtctgttttcatcatgggggcatagcattgctgtaacaatgcggtt
cccactacagctctcagctggcagccttctgtctaaagggccaaggtgac
ttcatatcagattagtacttcctgtttatgtgtctcctggcaggatgaca
aggcagcatcataaaatgtaagagttcctaagttgtggaggatggaggga
agggaagattagggagtccaggagataaacttaaccatttatacaagaca
ttggagccaggcttctgataactgaattctgtccattcccagactatgac
tgtctcaattcagattctgctttggacctcaatagccacttaaggagaaa
agaatagaagttctggatccaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_10122701_10123860
seq2: B6Ng01-189K16.b_48_1204

seq1  GAATTCTCCATGGTCTGAGAGTTTTTGCTTGATGGATCAGTGTTCCAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGGTCTGAGAGTTTTTGCTTGATGGATCAGTGTTCCAAAG  50

seq1  GATTCTATATGTTCAATCCTTGTTGGAGGCTGAGAGTTAACGTAGAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTATATGTTCAATCCTTGTTGGAGGCTGAGAGTTAACGTAGAAATC  100

seq1  ACCATTGCGGTTTAGAATCATAGTTATGAGCTGATTTGGGTAAACTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGCGGTTTAGAATCATAGTTATGAGCTGATTTGGGTAAACTTGCT  150

seq1  CTATACAAGGCATTTAGTAAACAATTTTAGTTTTATGAACCATAGTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAAGGCATTTAGTAAACAATTTTAGTTTTATGAACCATAGTTTTA  200

seq1  TTGCACTACCCAACCTTAACACTGGCAGAAATAAATATCCATAGTCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTACCCAACCTTAACACTGGCAGAAATAAATATCCATAGTCTGTG  250

seq1  TAGTGGCTAATCTGGGTTGTCAACTGGTCTCACCAGAAAAGAGCTAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCTAATCTGGGTTGTCAACTGGTCTCACCAGAAAAGAGCTAATGT  300

seq1  TAGTTGAGGTATTGTCTACATCAGATTAGTCTGTGACCGTGTTTGTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGAGGTATTGTCTACATCAGATTAGTCTGTGACCGTGTTTGTGAGG  350

seq1  GTATTTTCTTGACTGCCAATTGATGTCTTAGGAGATTCCAGCCCACTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCTTGACTGCCAATTGATGTCTTAGGAGATTCCAGCCCACTGCA  400

seq1  GGAAGTACTATCCATAAACAGGTAGGTCTGAGATGTATAAGGAAGAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTACTATCCATAAACAGGTAGGTCTGAGATGTATAAGGAAGAGGAG  450

seq1  CCTGGGAGCAAGCCAGTAAGAAGTGTTCCTTTATAGTTTCTGCCTTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGCAAGCCAGTAAGAAGTGTTCCTTTATAGTTTCTGCCTTCAGG  500

seq1  TTCCTGCTTTGAGTTCCTGCCTGACTTCGCTCAAAGATGGGCCTGAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTTTGAGTTCCTGCCTGACTTCGCTCAAAGATGGGCCTGAAATG  550

seq1  TAAGCTGAAATAAACTCTTTCATTCCCAATTTGGTTTTGATTATAGTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGAAATAAACTCTTTCATTCCCAATTTGGTTTTGATTATAGTGTT  600

seq1  TATCACAGCAACAGAAAACAAATTAGAAAAAGATGTAAATGAAAAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACAGCAACAGAAAACAAATTAGAAAAAGATGTAAATGAAAAAATAT  650

seq1  GACTGTTCTGACAGATTCCCAACCAAAGTAGGGAGCCAATTGCACTGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTCTGACAGATTCCCAACCAAAGTAGGGAGCCAATTGCACTGCAC  700

seq1  CTGTGGGATGGAATGAGTTTACTGACTTCTAAATTAGCTGACTCTGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGATGGAATGAGTTTACTGACTTCTAAATTAGCTGACTCTGTTTT  750

seq1  TCACTGTCCAGATGGTTATAAAATCTCTAAGCTTATTACCTTTCCCATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTCCAGATGGTTATAAAATCTCTAAGCTTATTACCTTTCCCATGC  800

seq1  CTCAATAGGACATTCATTCATAAAATGAGAATATTTACAGAATCTGCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATAGGACATTCATTCATAAAATGAGAATATTTACAGAATCTGCTTT  850

seq1  AGAAAAGCTATTGTAAGGATTGTCTGAATTCATTCAGACCAAAAGCCTTC  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGAAAAGCTATTGT-AGGATTGTCTGAATTCATTCAGACCAAAAGCCTTC  899

seq1  AAAATAATAAGCACAAAACTAAATGCTAATTGTGTTTATTTGAAGTAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATAAGCACAAAACTAAATGCTAATTGTGTTTATTTGAAGTAATG  949

seq1  TAGTGCATAGATCATTAATAAATGCATTGCTAGGAGACCCTTGTAAGTTT  1000
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAGTGCATAGATCATTAATAAATGCATTGCTAGGAGA-CCTTGTAAGTTT  998

seq1  CAACTGTACTGTTGATACAACTCTTCCTTTCTTTAA-TTCCTGCTGTCCA  1049
      ||||||||||| |||||||||||||| ||  ||||| |||||||||||||
seq2  CAACTGTACTG-TGATACAACTCTTCTTTCTTTTAATTTCCTGCTGTCCA  1047

seq1  GATATTGGGTCCATGTCCACCCCACCTCTCAGCATAAAACCAG-TAAAGA  1098
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GATATTGGGTCCATGTCCACCCCACCTCTCAGCATAAAACCAGTTAAAGA  1097

seq1  AATGGAGATGAGAGAAATTGAGCTGCAGTC-TGTT-CCATTATTTTAACA  1146
      |||| |||||| ||||  |||||||||||| |||| |||||| ||| |||
seq2  AATGTAGATGAAAGAA--TGAGCTGCAGTCTTGTTCCCATTAATTT-ACA  1144

seq1  TTCACCCAATCCCC  1160
       ||||||| |||||
seq2  -TCACCCATTCCCC  1157


seq1: chr14_10233284_10234363
seq2: B6Ng01-189K16.g_66_1138 (reverse)

seq1  TCTGGAGCCAGAACCTTCTTCTTCTTTTCTTCCTTTAGTGGGGCTATCTG  50
      |||||| |||||| |||| | |||||||| ||||| |||  |||||| ||
seq2  TCTGGATCCAGAA-CTTC-TATTCTTTTC-TCCTTAAGT--GGCTAT-TG  44

seq1  AGGTCAAAAGCAGAAATCTGAATTGAGACAGTCATAGTCTGGGGAATGGA  100
      ||||| ||||||| |||||||||||||||||||||||||| |||||||||
seq2  AGGTCCAAAGCAG-AATCTGAATTGAGACAGTCATAGTCT-GGGAATGGA  92

seq1  CAAGAATCAGTTTTCAGAAACCTGGCTCCAATGTCTTTGTAT-AATTGTT  149
      ||  | |||||| |||||| ||||||||||||||| |||||| ||| |||
seq2  CAGAATTCAGTTATCAGAAGCCTGGCTCCAATGTC-TTGTATAAATGGTT  141

seq1  AGTTTTATCTCCT-GACTCCCTAATCTTCCCTTCCCTCCATCCTCCACAA  198
      |  |||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAGTTTATCTCCTGGACTCCCTAATCTTCCCTTCCCTCCATCCTCCACAA  191

seq1  CTTAGGAACTCTTACATTTTATGATGCTGCCTTGTCATCCTGCCAGGAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAACTCTTACATTTTATGATGCTGCCTTGTCATCCTGCCAGGAGA  241

seq1  CACATAAACAGGAAGTACTAATCTGATATGAAGTCACCTTGGCCC-TTAG  297
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CACATAAACAGGAAGTACTAATCTGATATGAAGTCACCTTGGCCCTTTAG  291

seq1  ACAGAAGGCTGCCAGCCTGAGAGCTGTAGTGGGAACCGCATTGTTACAGC  347
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACAGAAGGCTGCCAG-CTGAGAGCTGTAGTGGGAACCGCATTGTTACAGC  340

seq1  AATGCTATGCCCCCATGATGAAAACAGACAGGAATGCATGATAGTGGAGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTATGCCCCCATGATGAAAACAGACAGGAATGCATGATAGTGGAGT  390

seq1  ATAACATCCCTGAGCAGATAAGGACTCCAGTCATATCTTTGGTTCAGGGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATCCCTGAGCAGATAAGGACTCCAGTCATATCTTTGGTTCAGGGT  440

seq1  TTTAGAAAATAAACAAATCACAAGAAGATAAAATGCAAGAAAAGCTTTCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAAATAAACAAATCACAAGAAGATAAAATGCAAGAAAAGCTTTCC  490

seq1  TAAGATCTTTATTAAATAGGTGTAAATTACCAAAAGGCCTTGAAATCACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCTTTATTAAATAGGTGTAAATTACCAAAAGGCCTTGAAATCACA  540

seq1  CACTGAAGAATAAGTAAAAACAACCCAGCAAAGTTGCCTGTCCTGAATGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGAATAAGTAAAAACAACCCAGCAAAGTTGCCTGTCCTGAATGA  590

seq1  CATGGTATGTAATAAAGCCTCTTTACTTTGAAAAAGCATAGACTAAAGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTATGTAATAAAGCCTCTTTACTTTGAAAAAGCATAGACTAAAGGA  640

seq1  TATCTAAACACAGAGGAGAGAACACTCCAATAGCTTATAAAAGTAAATAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAACACAGAGGAGAGAACACTCCAATAGCTTATAAAAGTAAATAT  690

seq1  TAATGGAATGGACAAGAAATAAAATTTTAAGATAAGTATATCTGCAAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGAATGGACAAGAAATAAAATTTTAAGATAAGTATATCTGCAAAAA  740

seq1  GAACACATGAGTTCTCTATATTTATCAGTTGCATGGAGTTTTTGTTTGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACATGAGTTCTCTATATTTATCAGTTGCATGGAGTTTTTGTTTGTT  790

seq1  TGTTTTTTGGTTTGTTTGTTTGGTTTTTTTTTTTAATTTTGGAATTTCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTGGTTTGTTTGTTTGGTTTTTTTTTTTAATTTTGGAATTTCAA  840

seq1  AATAGTGCCCAAGAGAATAAATATTTAGAAACATGATTCCTCTCTGTGTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGCCCAAGAGAATAAATATTTAGAAACATGATTCCTCTCTGTGTT  890

seq1  TTAAGAACAGGAATATTTATCTCCAAAGCAGGAATCTACAGAATGGGCGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAACAGGAATATTTATCTCCAAAGCAGGAATCTACAGAATGGGCGT  940

seq1  GTGTATTTGCCTCTGATTTCCCCAGACCAGGAATCTCACTGTCCTAGAAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTTGCCTCTGATTTCCCCAGACCAGGAATCTCACTGTCCTAGAAG  990

seq1  CCTATTCTGGCACTGGCTGAAATGGAAATTTGGTTCACAGAAAGCGAACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCTGGCACTGGCTGAAATGGAAATTTGGTTCACAGAAAGCGAACA  1040

seq1  TTGAAGGACCTGGTGGGCAGGTGGGTGGAATTC  1080
      |||||||||||||||||||||||||||||||||
seq2  TTGAAGGACCTGGTGGGCAGGTGGGTGGAATTC  1073


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