BAC Information

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BAC

Clone NameB6Ng01-191D07
Chromosome14 (Build37)
Map Location 67,519,659 - 67,652,217
singlet/doubletdoublet
Overlap genePnma2, LOC672614, Bnip3l, Ppp2r2a
Upstream geneScara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2, Ptk2b, LOC100043676, Trim35, Stmn4, Adra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870
Downstream geneEbf2, EG628416, LOC100043046, LOC100043056, Cdca2, Kctd9, Gnrh1, Dock5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191D07.bB6Ng01-191D07.g
ACCGA014762GA014763
length1,1311,059
definitionB6Ng01-191D07.b B6Ng01-191D07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,651,094 - 67,652,217)(67,519,659 - 67,520,684)
sequence
gaattcaggtggcaagagggttttgtgtcttccttttctattttatggaa
tgcttttggaaaagcattgatgttatttgaagtgaatccatgcaactcta
gactaattttggttgagagactttttttttttttttttaaatcataacaa
gaaagggtatcactatatatcatagccacctctacctactgaaaggtata
tgccacaatccctggctaaaattatactctgtgtgtgtgtgtgtatctgt
ctgtctgtcttagtctagttctattaatgtgaagagacaccatgatcatg
gcaacttgtataaaggaaagtatttaattgaggctggcttacagtttcag
ggtttagttcattatcgtcatggtgggaagcatggcagcatgcaggcaga
taccgtgctgagacttctatatctggaagggcagtcagccagaagaaact
gaggcaggcttcctccgataaggccacactcattcaattccagcattggc
taatggggaccattcttattcaaactatcaagtgtgtttctgggtgtgtg
tatttgtacacatgccatgtgcacatggagaacaggttctttccctttca
ccatggtgatttaggaagttgaactttggttgttaggcttcaaggcaact
tggctgctgagctgtctttcaggccccagttgggagatgtttgttttgag
acatggtttctctgcctcagctattttgttgcttttgtagtgtttggtgt
tttcttctttgtctagttttaactattactctagtgtgatttattcttcc
tgtggcctagtagataagttcacttttcccttccttagaatcttctgtaa
agctgacttccttgtcatacattgcttttagtcttttgttgtttttgatt
tgggacaggctggccttctgcctcgattcttggagtgctaggatgaaaag
gtgtgtgccaccacctcctggctatatttagtccattttaaccatggaaa
tttttttggttctaccaatattgaagagctgcttggctaggatgtagtag
tcagttcgagtttagcatccataatcttctgaatgaggcctctggccttt
ccagcttccggttttatagtagatgggcctg
gaattccaaagctccctgaggacttagtgatttgactgtgattgcaggag
ggactccccagagctccaagatagatttcaggcacttctgtagacctaag
gacagcaagggaaaatgcagcaagaccagtagcaagaagagagagttaat
ttggatttgattaaaagtaaaatgtgtgtgcctccaagaacactggtttt
tttttttaaaaggttataaaacgtggctggagagatggctcagatgctct
tccagaggaccaaagtttggtttccagcaaccatgttgggcagatcacaa
ccaccagttgtaattcttgttccaggagatctgacctccaaggtcacctg
cacacatgatacataaacccagagagacataggcgcatgcaggcacataa
attaaacaaataaacctttgaaaaagtgaaaagataacccaggaaaggaa
gaaattatcagaaaccatatgccagggttgaaaggacagctgagggatag
agagctgggctgttatgtgccaagtcctaggtttgtttgccagaactaac
actgaacaacaaccactatctatccaataaagaggcaggatctggaatag
ataaggaattcatatcactgaacaactagacaaggactcaatcttaaaaa
cagacaatgaacacccagcaagcacaacagtatattattgggaatgggca
taaaaccaccaagagattctatagaaagataaaaatgactagtggttgga
gatactatacagacatgggaattctcacactcggaccaatgtaaagggag
tatggatgttccctaaaaatagctagccctagggtttaccacagaagcaa
agaagtccccacttcttggggtaggaaccctcaaaaaatggagaatatgg
attctactttgaagaaggaatgttgacctcacccattttattccagaatg
ggccaaaaggcaaaaatggtccccaaatgcccattaaagggacagaatga
ttggaaaaaacatggcaaaaaggagggcatatttatttcagcccaataaa
aagggaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_67651094_67652217
seq2: B6Ng01-191D07.b_47_1177 (reverse)

seq1  CAGGCCCATCTACTATAAAACC-GAAACTTGAAAAGCCAGAAGGTCTCAA  49
      |||||||||||||||||||||| ||| || |||| ||||| ||| ||| |
seq2  CAGGCCCATCTACTATAAAACCGGAAGCTGGAAAGGCCAG-AGGCCTC-A  48

seq1  TTCAGAAAGATTATGGATGCCAAACACG-ACTGACTACTACATCC-AGCA  97
      ||||| |||||||||||||| |||| || |||||||||||||||| ||| 
seq2  TTCAG-AAGATTATGGATGCTAAACTCGAACTGACTACTACATCCTAGCC  97

seq1  AAGCAAC-CTCTCATAATGGTAGAAC--AAAAAATTTCCATGGTTAAAAT  144
      ||||| | ||   ||| |||||||||  ||||||||||||||||||||||
seq2  AAGCAGCTCTTCAATATTGGTAGAACCAAAAAAATTTCCATGGTTAAAAT  147

seq1  GGACTAAATA-AGCCAGGAGGTGGTGGCACACACC-TTTCATCCTAGCAC  192
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  GGACTAAATATAGCCAGGAGGTGGTGGCACACACCTTTTCATCCTAGCAC  197

seq1  TCC-AGAATCGAGGCAG-AGGCCAGCCTGTCCCAAATCAAAAACAACAAA  240
      ||| ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCCAAGAATCGAGGCAGAAGGCCAGCCTGTCCCAAATCAAAAACAACAAA  247

seq1  AGACTAAAAGCAATGTATGACAAGGAAGTCAGCTTTACAGAAGATTCTAA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAAAAGCAATGTATGACAAGGAAGTCAGCTTTACAGAAGATTCTAA  297

seq1  GGAAGGGAAAAGTGAACTTATCTACTAGGCCACAGGAAGAATAAATCACA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGAAAAGTGAACTTATCTACTAGGCCACAGGAAGAATAAATCACA  347

seq1  CTAGAGTAATAGTTAAAACTAGACAAAGAAGAAAACACCAAACACTACAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTAATAGTTAAAACTAGACAAAGAAGAAAACACCAAACACTACAA  397

seq1  AAGCAACAAAATAGCTGAGGCAGAGAAACCATGTCTCAAAACAAACATCT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACAAAATAGCTGAGGCAGAGAAACCATGTCTCAAAACAAACATCT  447

seq1  CCCAACTGGGGCCTGAAAGACAGCTCAGCAGCCAAGTTGCCTTGAAGCCT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTGGGGCCTGAAAGACAGCTCAGCAGCCAAGTTGCCTTGAAGCCT  497

seq1  AACAACCAAAGTTCAACTTCCTAAATCACCATGGTGAAAGGGAAAGAACC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCAAAGTTCAACTTCCTAAATCACCATGGTGAAAGGGAAAGAACC  547

seq1  TGTTCTCCATGTGCACATGGCATGTGTACAAATACACACACCCAGAAACA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCCATGTGCACATGGCATGTGTACAAATACACACACCCAGAAACA  597

seq1  CACTTGATAGTTTGAATAAGAATGGTCCCCATTAGCCAATGCTGGAATTG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGATAGTTTGAATAAGAATGGTCCCCATTAGCCAATGCTGGAATTG  647

seq1  AATGAGTGTGGCCTTATCGGAGGAAGCCTGCCTCAGTTTCTTCTGGCTGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTGTGGCCTTATCGGAGGAAGCCTGCCTCAGTTTCTTCTGGCTGA  697

seq1  CTGCCCTTCCAGATATAGAAGTCTCAGCACGGTATCTGCCTGCATGCTGC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTTCCAGATATAGAAGTCTCAGCACGGTATCTGCCTGCATGCTGC  747

seq1  CATGCTTCCCACCATGACGATAATGAACTAAACCCTGAAACTGTAAGCCA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCCCACCATGACGATAATGAACTAAACCCTGAAACTGTAAGCCA  797

seq1  GCCTCAATTAAATACTTTCCTTTATACAAGTTGCCATGATCATGGTGTCT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAATTAAATACTTTCCTTTATACAAGTTGCCATGATCATGGTGTCT  847

seq1  CTTCACATTAATAGAACTAGACTAAGACAGACAGACAGATACACACACAC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACATTAATAGAACTAGACTAAGACAGACAGACAGATACACACACAC  897

seq1  ACACAGAGTATAATTTTAGCCAGGGATTGTGGCATATACCTTTCAGTAGG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGTATAATTTTAGCCAGGGATTGTGGCATATACCTTTCAGTAGG  947

seq1  TAGAGGTGGCTATGATATATAGTGATACCCTTTCTTGTTATGATTTAAAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTGGCTATGATATATAGTGATACCCTTTCTTGTTATGATTTAAAA  997

seq1  AAAAAAAAAAAAAGTCTCTCAACCAAAATTAGTCTAGAGTTGCATGGATT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGTCTCTCAACCAAAATTAGTCTAGAGTTGCATGGATT  1047

seq1  CACTTCAAATAACATCAATGCTTTTCCAAAAGCATTCCATAAAATAGAAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAAATAACATCAATGCTTTTCCAAAAGCATTCCATAAAATAGAAA  1097

seq1  AGGAAGACACAAAACCCTCTTGCCACCTGAATTC  1124
      ||||||||||||||||||||||||||||||||||
seq2  AGGAAGACACAAAACCCTCTTGCCACCTGAATTC  1131

seq1: chr14_67519659_67520684
seq2: B6Ng01-191D07.g_65_1123

seq1  GAATTCCAAAGCTCCCTGAGGACTTAGTGATTTGACTGTGATTGCAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGCTCCCTGAGGACTTAGTGATTTGACTGTGATTGCAGGAG  50

seq1  GGACTCCCCAGAGCTCCAAGATAGATTTCAGGCACTTCTGTAGACCTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCCCAGAGCTCCAAGATAGATTTCAGGCACTTCTGTAGACCTAAG  100

seq1  GACAGCAAGGGAAAATGCAGCAAGACCAGTAGCAAGAAGAGAGAGTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAAGGGAAAATGCAGCAAGACCAGTAGCAAGAAGAGAGAGTTAAT  150

seq1  TTGGATTTGATTAAAAGTAAAATGTGTGTGCCTCCAAGAACACTGGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTTGATTAAAAGTAAAATGTGTGTGCCTCCAAGAACACTGGTTTT  200

seq1  TTTTTTTAAAAGGTTATAAAACGTGGCTGGAGAGATGGCTCAGATGCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAAAGGTTATAAAACGTGGCTGGAGAGATGGCTCAGATGCTCT  250

seq1  TCCAGAGGACCAAAGTTTGGTTTCCAGCAACCATGTTGGGCAGATCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGACCAAAGTTTGGTTTCCAGCAACCATGTTGGGCAGATCACAA  300

seq1  CCACCAGTTGTAATTCTTGTTCCAGGAGATCTGACCTCCAAGGTCACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGTTGTAATTCTTGTTCCAGGAGATCTGACCTCCAAGGTCACCTG  350

seq1  CACACATGATACATAAACCCAGAGAGACATAGGCGCATGCAGGCACATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGATACATAAACCCAGAGAGACATAGGCGCATGCAGGCACATAA  400

seq1  ATTAAACAAATAAACCTTTGAAAAAGTGAAAAGATAACCCAGGAAAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACAAATAAACCTTTGAAAAAGTGAAAAGATAACCCAGGAAAGGAA  450

seq1  GAAATTATCAGAAACCATATGCCAGGGTTGAAAGGACAGCTGAGGGATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTATCAGAAACCATATGCCAGGGTTGAAAGGACAGCTGAGGGATAG  500

seq1  AGAGCTGGGCTGTTATGTGCCAAGTCCTAGGTTTGTTTGCCAGAACTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGGCTGTTATGTGCCAAGTCCTAGGTTTGTTTGCCAGAACTAAC  550

seq1  ACTGAACAACAACCACTATCTATCCAATAAAGAGGCAGGATCTGGAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACAACAACCACTATCTATCCAATAAAGAGGCAGGATCTGGAATAG  600

seq1  ATAAGGAATTCATATCACTGAACAACTAGACAAGGACTCAATCTTAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAATTCATATCACTGAACAACTAGACAAGGACTCAATCTTAAAAA  650

seq1  CAGACAATGAACACCCAGCAAGCACAACAGTATATTATTGGGAATGGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAATGAACACCCAGCAAGCACAACAGTATATTATTGGGAATGGGCA  700

seq1  TAAAACCACCAAGAGATTCTATAGAAAGAGAAAAATGACTAGT-GTTGGA  749
      ||||||||||||||||||||||||||||| ||||||||||||| ||||||
seq2  TAAAACCACCAAGAGATTCTATAGAAAGATAAAAATGACTAGTGGTTGGA  750

seq1  GATACTATACAGACATGGGAATTCTCACACTCGGA-CAATGTAAA-GGAG  797
      ||||||||||||||||||||||||||||||||||| ||||||||| ||||
seq2  GATACTATACAGACATGGGAATTCTCACACTCGGACCAATGTAAAGGGAG  800

seq1  TATGGATGTT-CCTAAAAATAGCTAG-CCTAGGG-TTACCACAG-AGCAA  843
      |||||||||| ||||||||||||||| ||||||| ||||||||| |||||
seq2  TATGGATGTTCCCTAAAAATAGCTAGCCCTAGGGTTTACCACAGAAGCAA  850

seq1  AGAAGT-CCCACTCCT--GGGTA-GAATCCTCAAAAAATGGAGAATAT-G  888
      |||||| |||||| ||  ||||| ||| |||||||||||||||||||| |
seq2  AGAAGTCCCCACTTCTTGGGGTAGGAACCCTCAAAAAATGGAGAATATGG  900

seq1  ATTCTACTTTG-AGAA-GAATG-TGA-CTCA-CCAATTTATT-CAGAAT-  931
      ||||||||||| |||| ||||| ||| |||| ||| |||||| |||||| 
seq2  ATTCTACTTTGAAGAAGGAATGTTGACCTCACCCATTTTATTCCAGAATG  950

seq1  GGCCAAAAGGCAAAAAT-GTCCCC-AATGCCCATT-AAGGGACAG-ATGA  977
      ||||||||||||||||| |||||| |||||||||| ||||||||| ||||
seq2  GGCCAAAAGGCAAAAATGGTCCCCAAATGCCCATTAAAGGGACAGAATGA  1000

seq1  T--GGAAAAACAT-GCAAAAAG--AGGCATATT--ATTCAG-CCAATAAA  1019
      |  | |||||||| ||||||||   ||||||||   ||||| ||||||||
seq2  TTGGAAAAAACATGGCAAAAAGGAGGGCATATTTATTTCAGCCCAATAAA  1050

seq1  A--GGAATA  1026
      |  ||||||
seq2  AAGGGAATA  1059