BAC Information

Click to search

BAC

Clone NameB6Ng01-191E16
Chromosome14 (Build37)
Map Location 9,423,313 - 9,569,379
singlet/doubletdoublet
Overlap gene4930452B06Rik
Upstream geneLOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005
Downstream geneLOC100041948, Fhit
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191E16.bB6Ng01-191E16.g
ACCGA014823GA014824
length3851,138
definitionB6Ng01-191E16.b B6Ng01-191E16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,568,989 - 9,569,379)(9,423,313 - 9,424,464)
sequence
acagagctgcactcagaaaacataaatgttacacgaaaaaaaaagttcaa
ataggaaaaattctccaattgtaggggaagaaacaaaagaaaaaggagat
aggaggacccctaatttaaaacattgagcaggtccagagctgagcatgca
tcagtagcacccactattagaaatgctgttcccctaaaaacgcatactct
gttcctggtggggattagcttcctctcaatcttacagacattctgggaag
gaagagaagaagacgaagaagacgaagacgaagatggagacagaagaaga
agaagaagaagaaggagaaggagaaggagaaggagaaggagaaggagaag
gagaaggagaaggagaaggagaaggagaaggagaa
gaattcctttatcagaatcatttgtccttgaagccaaagtggtggtgatg
actatgatttttttccttattatgatctaaaaattactaactttaatgca
catttgaggcctaagcatacagaaatagtgagattgcaaaatgacatgag
aaaatacatagtgtcatgtttaagtctggagtaatgtggctatggaatga
aattccaaggcaagtacaaaatggttctgtctttatctgatccttccaat
tctgtacatttaccaagaggacttttattttgtcagttttctctgtatac
ttctcttgaagtttaaactcactgagcactctttgccctttttagaaaag
agaaacaattctgccttgtgtgctttgctggaacatgatgtagcctttgt
tccttcttttctcttttttctatttccatcagaggaagctaaggcaagaa
tttaaggcaggagcttaagcacaaagcgtgaggaatgctgcttgtttgct
cccaggctcccatttagctacctttcttatacagaccaggttcccctgtg
ctgatggtagagtccacagtgacctgggccctcctacacctctgcagtaa
agaaagtgccgcctcccttccctcccccacacctatagcacaatctcatg
gaggcaattcttcacctgaggttacttcttcccaagtatgtcaagttgat
agcaagataaggcatggaaggaagcatttggtctttcactatcaagtatg
atatacaaagtccttcctcgatccttcccttatcttaatttttggagtct
ttatcaagaatatatgttgggctttgtcacagttcatctgtctgtttgag
gtggtcacagtacagacttctttctttctcccagtagggtttatctacct
tcaacatcatggagaaaacacacatgggccacagagacaaatgggatatg
aaaccatcagataccagtgagaaacagggacagaggaaaacacctgggaa
gaaacactattgtgtagagtaacagctaaaactcaccatgtgattgaggg
ttagcactctacatgcagagcttgaaactccacatatatgagctaagcaa
gcacacccaaaagctcatactcaccatgaagcagacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_9568989_9569379
seq2: B6Ng01-191E16.b_43_433 (reverse)

seq1  TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTT  50

seq1  CTCCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTGTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTGTCTCC  100

seq1  ATCTTCGTCTTCGTCTTCTTCGTCTTCTTCTCTTCCTTCCCAGAATGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCGTCTTCGTCTTCTTCGTCTTCTTCTCTTCCTTCCCAGAATGTCT  150

seq1  GTAAGATTGAGAGGAAGCTAATCCCCACCAGGAACAGAGTATGCGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATTGAGAGGAAGCTAATCCCCACCAGGAACAGAGTATGCGTTTTT  200

seq1  AGGGGAACAGCATTTCTAATAGTGGGTGCTACTGATGCATGCTCAGCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAACAGCATTTCTAATAGTGGGTGCTACTGATGCATGCTCAGCTCT  250

seq1  GGACCTGCTCAATGTTTTAAATTAGGGGTCCTCCTATCTCCTTTTTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGCTCAATGTTTTAAATTAGGGGTCCTCCTATCTCCTTTTTCTTT  300

seq1  TGTTTCTTCCCCTACAATTGGAGAATTTTTCCTATTTGAACTTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTCCCCTACAATTGGAGAATTTTTCCTATTTGAACTTTTTTTTT  350

seq1  CGTGTAACATTTATGTTTTCTGAGTGCAGCTCTGTGAATTC  391
      |||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTAACATTTATGTTTTCTGAGTGCAGCTCTGTGAATTC  391

seq1: chr14_9423313_9424464
seq2: B6Ng01-191E16.g_62_1199

seq1  GAATTCCTTTATCAGAATCATTTGTCCTTGAAGCCAAAGTGGTGGTGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTATCAGAATCATTTGTCCTTGAAGCCAAAGTGGTGGTGATG  50

seq1  ACTATGATTTTTTTCCTTATTATGATCTAAAAATTACTAACTTTAATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGATTTTTTTCCTTATTATGATCTAAAAATTACTAACTTTAATGCA  100

seq1  CATTTGAGGCCTAAGCATACAGAAATAGTGAGATTGCAAAATGACATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAGGCCTAAGCATACAGAAATAGTGAGATTGCAAAATGACATGAG  150

seq1  AAAATACATAGTGTCATGTTTAAGTCTGGAGTAATGTGGCTATGGAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATAGTGTCATGTTTAAGTCTGGAGTAATGTGGCTATGGAATGA  200

seq1  AATTCCAAGGCAAGTACAAAATGGTTCTGTCTTTATCTGATCCTTCCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAAGGCAAGTACAAAATGGTTCTGTCTTTATCTGATCCTTCCAAT  250

seq1  TCTGTACATTTACCAAGAGGACTTTTATTTTGTCAGTTTTCTCTGTATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACATTTACCAAGAGGACTTTTATTTTGTCAGTTTTCTCTGTATAC  300

seq1  TTCTCTTGAAGTTTAAACTCACTGAGCACTCTTTGCCCTTTTTAGAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTGAAGTTTAAACTCACTGAGCACTCTTTGCCCTTTTTAGAAAAG  350

seq1  AGAAACAATTCTGCCTTGTGTGCTTTGCTGGAACATGATGTAGCCTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAATTCTGCCTTGTGTGCTTTGCTGGAACATGATGTAGCCTTTGT  400

seq1  TCCTTCTTTTCTCTTTTTTCTATTTCCATCAGAGGAAGCTAAGGCAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTTTCTCTTTTTTCTATTTCCATCAGAGGAAGCTAAGGCAAGAA  450

seq1  TTTAAGGCAGGAGCTTAAGCACAAAGCGTGAGGAATGCTGCTTGTTTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGCAGGAGCTTAAGCACAAAGCGTGAGGAATGCTGCTTGTTTGCT  500

seq1  CCCAGGCTCCCATTTAGCTACCTTTCTTATACAGACCAGGTTCCCCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCTCCCATTTAGCTACCTTTCTTATACAGACCAGGTTCCCCTGTG  550

seq1  CTGATGGTAGAGTCCACAGTGACCTGGGCCCTCCTACACCTCTGCAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGTAGAGTCCACAGTGACCTGGGCCCTCCTACACCTCTGCAGTAA  600

seq1  AGAAAGTGCCGCCTCCCTTCCCTCCCCCACACCTATAGCACAATCTCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTGCCGCCTCCCTTCCCTCCCCCACACCTATAGCACAATCTCATG  650

seq1  GAGGCAATTCTTCACCTGAGGTTACTTCTTCCCAAGTATGTCAAGTTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAATTCTTCACCTGAGGTTACTTCTTCCCAAGTATGTCAAGTTGAT  700

seq1  AGCAAGATAAGGCATGGAAGGAAGCATTTGGTCTTTCACTATCAAGTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGATAAGGCATGGAAGGAAGCATTTGGTCTTTCACTATCAAGTATG  750

seq1  ATATACAAAGTCCTTCCTCGATCCTTCCCTTATCTTAATTTTTGGAGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAAGTCCTTCCTCGATCCTTCCCTTATCTTAATTTTTGGAGTCT  800

seq1  TTATCAAGAATATATGTTGGGCTTTGTCACAGTTCATCTGTCTGTTTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAGAATATATGTTGGGCTTTGTCACAGTTCATCTGTCTGTTTGAG  850

seq1  GTGGTCACAGTACAGACTTCTTTCTTTCTCCCAGTAGGGTTTATCTACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCACAGTACAGACTTCTTTCTTTCTCCCAGTAGGGTTTATCTACCT  900

seq1  TCAACATCATGGAGAAAACACACAT-GGCCACAGAGACAAATGGGATATG  949
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCAACATCATGGAGAAAACACACATGGGCCACAGAGACAAATGGGATATG  950

seq1  AAACCATCAGATACCAGTGAG-AACAGGGACAGAGGAAAAACACTGGGAA  998
      ||||||||||||||||||||| ||||||||||||||||||   |||||||
seq2  AAACCATCAGATACCAGTGAGAAACAGGGACAGAGGAAAACACCTGGGAA  1000

seq1  GAAACACTA-TGTGTAGAAGTAACAGCTAAAACTCAACCATGTGATTGAA  1047
      ||||||||| ||||||| ||||||||||||||||| |||||||||||| |
seq2  GAAACACTATTGTGTAG-AGTAACAGCTAAAACTC-ACCATGTGATTG-A  1047

seq1  GGGTTAGCAACTCTACATGCAGGAAGCTTGAAAACTCCACATATAATGAG  1097
      |||||||| |||||||||||||  |||||| ||||||||||||| |||||
seq2  GGGTTAGC-ACTCTACATGCAG--AGCTTG-AAACTCCACATAT-ATGAG  1092

seq1  CTAAAAGCAAGCAACACCCAAAAAGCTCATAACCCCACCATGGAGAGCCA  1147
      ||  |||||||| |||||| |||||||||||  | ||||||| ||   ||
seq2  CT--AAGCAAGC-ACACCC-AAAAGCTCATA--CTCACCATGAAG---CA  1133

seq1  GACAA  1152
      |||||
seq2  GACAA  1138