BAC Information

Click to search

BAC

Clone NameB6Ng01-191N01
Chromosome14 (Build37)
Map Location 51,974,609 - 51,975,337
singlet/doubletsinglet
Overlap genenone
Upstream geneTlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203
Downstream geneLOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191N01.bB6Ng01-191N01.g
ACCGA015215GA015216
length5501,022
definitionB6Ng01-191N01.b B6Ng01-191N01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttgttg
ggattgcaagcttgtacaaccactctgggaatcagtctggcagttcctca
gaaaattggacatagtaataccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttatttatttattttttccattttttattaggt
atttcgctcatttacatttgcaatgctataccaaaagtcccccatagcca
cccaccccctctcccctacccacccactccccttttatggccctggcgtt
cccctgtactggggcatataaagtttgcgtgtccaataaggcagccttat

gaattccttcttttttttttttcgttcttctattttaaaaaatttttcct
ttatatattttaaactccagatttttttgtttgtttgctttttgcttttg
ttttgttttgttttgtttgttttgttttgttttgttttgtttcgagatag
ggtttctctgtgtagcccttgctgtcctggaactcactccagagaccagg
ctggcctggaactcagaaatctatctgcctctgcctcctgagtgctgggt
ttaaaggtgtgtgtgtcaccacgccaggctaaactccagattttattcct
ctcctggtctacccccataccatatcccataccaccacccctaaccccct
gtgtccacaggatgtccccacccccacgcccacccccaccagacctttga
actctttagagcctccattctcttcaggcttatgtgaattttctctgact
gaatccagacctggcagtcctctgctgtatatattttgggggcctcataa
cagctgttgtatgcagcctggttggtattgcagtgtctgagagatctcca
gggtccaggtttactgagtgttcttgtcctccaacaggttcccccccccc
ttcagctttatcaagctttccaacaacaagggttagcagctttccataat
tcaaccacaggggtcagcacacaaccaatggttagaagcactgaccacca
gagaactgctcaacctgatatacaacttcagtacggtggctggatattaa
ttatatcaaacaaattagtatccttattttactcaaaaaataaagaggct
gagaaagaaattagggaaaccacatccttctcaatagtcacaaacaaaag
aaaatacctttgaaggagactctaaccaggcaagtgaaatatctgtatga
cagaacttcaagtctctgaagaaagaaatcaaagaacatctcagaagaca
gaagagaacttcctttctcatggattgcaagattaatatagtaaaatggg
ccatcatgcatctacagattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51974609_51975337
seq2: B6Ng01-191N01.g_345_1087

seq1  TAAACTCCAGATTTT-TTCCTCTCCTGGTCCACCCCCATACCATATCCCA  49
      ||||||||||||||| |||||||||||||| |||||||||||||||||||
seq2  TAAACTCCAGATTTTATTCCTCTCCTGGTCTACCCCCATACCATATCCCA  50

seq1  TACCTTCACCCAACACCCCCTGTGTCCACAGGATATC------------C  87
      ||||  |||||   |||||||||||||||||||| ||            |
seq2  TACCACCACCCCTAACCCCCTGTGTCCACAGGATGTCCCCACCCCCACGC  100

seq1  CCACCCCCACCAGACCTTTGAACTCTCTAGGGCCTCCATTCTCTTGAGGC  137
      |||||||||||||||||||||||||| ||| |||||||||||||| ||||
seq2  CCACCCCCACCAGACCTTTGAACTCTTTAGAGCCTCCATTCTCTTCAGGC  150

seq1  TTGTGTGCATTTTCTCTGACTGAATCTACACCTGGCAGTCCTCTGTTGTA  187
      || |||| |||||||||||||||||| | |||||||||||||||| ||||
seq2  TTATGTGAATTTTCTCTGACTGAATCCAGACCTGGCAGTCCTCTGCTGTA  200

seq1  TATATTTTGGGGGCCTCATAAAAGCTGTTGTATGCAGCCTGGTTGGTATT  237
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATATTTTGGGGGCCTCATAACAGCTGTTGTATGCAGCCTGGTTGGTATT  250

seq1  GCAGTGTCTGAGAGATCTCTAGGGTCCAGGTTTACTGAGTCTTCAGGTCC  287
      ||||||||||||||||||| |||||||||||||||||||| |||  ||||
seq2  GCAGTGTCTGAGAGATCTCCAGGGTCCAGGTTTACTGAGTGTTCTTGTCC  300

seq1  TCCAACAAGGTTACCCCCCCCC-CCAGCTTCTTCCAGCTTTCCAAAAACA  336
      |||||| ||||| |||||||||  ||||||  || |||||||||| ||||
seq2  TCCAAC-AGGTTCCCCCCCCCCTTCAGCTTTATCAAGCTTTCCAACAACA  349

seq1  GGGGTTAGCAGCTTTCCATAATTCAACCACAGGGGTCAGCACACAACCAA  386
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAGCAGCTTTCCATAATTCAACCACAGGGGTCAGCACACAACCAA  399

seq1  TGGTTAGAAGCACTGACCACCAGAGAACTGCTAAACCTGATATACAACTT  436
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGGTTAGAAGCACTGACCACCAGAGAACTGCTCAACCTGATATACAACTT  449

seq1  CAGCAAAGTGGCTGGATATAAATTATGTCAAACAAATCAGTATCCTTCTT  486
      ||| |  |||||||||||| |||||| |||||||||| ||||||||| ||
seq2  CAGTACGGTGGCTGGATATTAATTATATCAAACAAATTAGTATCCTTATT  499

seq1  TTACTCAAAAAATAAACAGGCTGAGAAAGAAATTAGGAAAACCGCACCCT  536
      |||||||||||||||| |||||||||||||||||||| ||||| || |||
seq2  TTACTCAAAAAATAAAGAGGCTGAGAAAGAAATTAGGGAAACCACATCCT  549

seq1  TCTCAATAGTCACAAACAAAAGAAAATACC-TTGAAGGAGACTCTAACCA  585
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTCAATAGTCACAAACAAAAGAAAATACCTTTGAAGGAGACTCTAACCA  599

seq1  GGCAAGTGAAACATCTGTATGACAAAACTTCAAGTCTCTGAAGAAAGAAA  635
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  GGCAAGTGAAATATCTGTATGACAGAACTTCAAGTCTCTGAAGAAAGAAA  649

seq1  TCAAAGAACATGTCAGAAGGTAGAA-AGATCTCCCCTTCTCATGGATTGG  684
      ||||||||||| |||||||  |||| ||| || || |||||||||||| |
seq2  TCAAAGAACATCTCAGAAGACAGAAGAGAACTTCCTTTCTCATGGATT-G  698

seq1  CAGGATTGATATAGTAAAAATGGCCTTTATGCATCTACATATTCA  729
      || |||| |||||||||||  |||| | ||||||||||| |||||
seq2  CAAGATTAATATAGTAAAATGGGCCATCATGCATCTACAGATTCA  743